RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 PAM16Q9Y3D7 125 aa9.62□□□□□ -0.87
PNKP-230ENST00000638016 F8WEM9 126 aa9.59□□□□□ -0.87
PNKP-230ENST00000638016 DLEU1O43261 78 aa9.59□□□□□ -0.87
PNKP-230ENST00000638016 SPATA45Q537H7 98 aa9.59□□□□□ -0.87
PNKP-230ENST00000638016 CFC1BP0CG36 223 aa9.58□□□□□ -0.88
PNKP-230ENST00000638016 CFC1P0CG37 223 aa9.58□□□□□ -0.88
PNKP-230ENST00000638016 C2orf91Q6ZV80 131 aa9.58□□□□□ -0.88
PNKP-230ENST00000638016 IGFL1Q6UW32 110 aa9.57□□□□□ -0.88
PNKP-230ENST00000638016 IGLV8-61A0A075B6I0 122 aa9.55□□□□□ -0.88
PNKP-230ENST00000638016 BVES-AS1Q5T3Y7 98 aa9.55□□□□□ -0.88
PNKP-230ENST00000638016 LCE2CQ5TA81 110 aa9.55□□□□□ -0.88
PNKP-230ENST00000638016 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.55□□□□□ -0.88
PNKP-230ENST00000638016 KRTAP19-2Q3LHN2 52 aa9.54□□□□□ -0.88
PNKP-230ENST00000638016 H3BUT2 72 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 OCIAD2Q56VL3 154 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 CLEC2BQ92478 149 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 VAMP8Q9BV40 100 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 HIGD1BQ9P298 99 aa9.53□□□□□ -0.88
PNKP-230ENST00000638016 TCL1BO95988 128 aa9.52□□□□□ -0.89
PNKP-230ENST00000638016 RAB37Q96AX2 223 aa9.52□□□□□ -0.89
PNKP-230ENST00000638016 TRBV7-7A0A0K0K1E9 115 aa9.51□□□□□ -0.89
PNKP-230ENST00000638016 Q6JHZ5 121 aa9.51□□□□□ -0.89
PNKP-230ENST00000638016 A0A0B4J2C4 111 aa9.5□□□□□ -0.89
PNKP-230ENST00000638016 SNHG12Q9BXW3 62 aa9.48□□□□□ -0.89
PNKP-230ENST00000638016 FXYD2P54710 66 aa9.47□□□□□ -0.89
PNKP-230ENST00000638016 RPL37P61927 97 aaKnown RBP9.47□□□□□ -0.89
PNKP-230ENST00000638016 CEND1Q8N111 149 aa9.47□□□□□ -0.89
PNKP-230ENST00000638016 PPDPFLQ8WWR9 84 aa9.45□□□□□ -0.9
PNKP-230ENST00000638016 PYY3Q5JQD4 70 aa9.43□□□□□ -0.9
PNKP-230ENST00000638016 H0YGX0 51 aa9.41□□□□□ -0.9
PNKP-230ENST00000638016 MT1HP80294 61 aa9.41□□□□□ -0.9
PNKP-230ENST00000638016 PRO1854Q9UHT4 67 aa9.41□□□□□ -0.9
PNKP-230ENST00000638016 NDUFV3P56181 108 aaKnown RBP9.4□□□□□ -0.9
PNKP-230ENST00000638016 TRIAP1O43715 76 aa9.39□□□□□ -0.91
PNKP-230ENST00000638016 K7ERJ3 54 aa9.38□□□□□ -0.91
PNKP-230ENST00000638016 OBSCN-AS1Q96MR7 158 aa9.38□□□□□ -0.91
PNKP-230ENST00000638016 TMEM238LA0A1B0GVL6 79 aa9.37□□□□□ -0.91
PNKP-230ENST00000638016 A6NJY4 79 aa9.37□□□□□ -0.91
PNKP-230ENST00000638016 LST1O00453 97 aa9.36□□□□□ -0.91
PNKP-230ENST00000638016 TMA7Q9Y2S6 64 aaKnown RBP9.36□□□□□ -0.91
PNKP-230ENST00000638016 FABP2P12104 132 aa9.35□□□□□ -0.91
PNKP-230ENST00000638016 SNCGO76070 127 aa9.34□□□□□ -0.91
PNKP-230ENST00000638016 Q6Q795 121 aa9.34□□□□□ -0.91
PNKP-230ENST00000638016 A0A087WSZ3 146 aa9.33□□□□□ -0.92
PNKP-230ENST00000638016 A0A1B0GV72 72 aa9.33□□□□□ -0.92
PNKP-230ENST00000638016 H3BMG7 143 aa9.33□□□□□ -0.92
PNKP-230ENST00000638016 HSD52Q0P140 79 aa9.33□□□□□ -0.92
PNKP-230ENST00000638016 A0A1B0GX51 115 aa9.31□□□□□ -0.92
PNKP-230ENST00000638016 TEN1Q86WV5 123 aa9.31□□□□□ -0.92
PNKP-230ENST00000638016 A0A1W2PNM2 257 aa9.3□□□□□ -0.92
PNKP-230ENST00000638016 Q96NJ1 140 aa9.3□□□□□ -0.92
PNKP-230ENST00000638016 KRTAP9-6A0A140TA67 174 aa9.29□□□□□ -0.92
PNKP-230ENST00000638016 SS18L2Q9UHA2 77 aa9.29□□□□□ -0.92
PNKP-230ENST00000638016 FLGP20930 4061 aaPredicted RBP9.29□□□□□ -0.92
PNKP-230ENST00000638016 PSMB2P49721 201 aa9.28□□□□□ -0.92
PNKP-230ENST00000638016 Q75L30 129 aa9.28□□□□□ -0.92
PNKP-230ENST00000638016 FSIP2Q5CZC0 6907 aa9.26□□□□□ -0.93
PNKP-230ENST00000638016 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
PNKP-230ENST00000638016 COX6B2Q6YFQ2 88 aa9.25□□□□□ -0.93
PNKP-230ENST00000638016 ATP11AUNQ6ZP68 121 aa9.24□□□□□ -0.93
PNKP-230ENST00000638016 ORMDL1Q9P0S3 153 aa9.24□□□□□ -0.93
PNKP-230ENST00000638016 UQCR10Q9UDW1 63 aa9.24□□□□□ -0.93
PNKP-230ENST00000638016 DNAL4O96015 105 aa9.23□□□□□ -0.93
PNKP-230ENST00000638016 DSCR10P59022 87 aa9.22□□□□□ -0.93
PNKP-230ENST00000638016 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
PNKP-230ENST00000638016 GHRHP01286 108 aa9.21□□□□□ -0.94
PNKP-230ENST00000638016 LORP23490 312 aaPredicted RBP9.21□□□□□ -0.94
PNKP-230ENST00000638016 ANKRD29Q8N6D5 301 aa9.2□□□□□ -0.94
PNKP-230ENST00000638016 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
PNKP-230ENST00000638016 SIGMAR1Q99720 223 aa9.2□□□□□ -0.94
PNKP-230ENST00000638016 A8MUU9 505 aa9.18□□□□□ -0.94
PNKP-230ENST00000638016 M0R2T5 61 aa9.18□□□□□ -0.94
PNKP-230ENST00000638016 COX6CP09669 75 aa9.18□□□□□ -0.94
PNKP-230ENST00000638016 DEFB116Q30KQ4 102 aa9.17□□□□□ -0.94
PNKP-230ENST00000638016 TRBV7-4A0A0J9YYF1 115 aa9.15□□□□□ -0.94
PNKP-230ENST00000638016 TMEM256-PLSCR3K7ERE1 68 aa9.15□□□□□ -0.94
PNKP-230ENST00000638016 NOTCH2NLQ7Z3S9 236 aa9.15□□□□□ -0.94
PNKP-230ENST00000638016 IGKV4-1P06312 121 aa9.14□□□□□ -0.95
PNKP-230ENST00000638016 CCKP06307 115 aa9.13□□□□□ -0.95
PNKP-230ENST00000638016 UBE2V1Q13404 147 aa9.12□□□□□ -0.95
PNKP-230ENST00000638016 KRTAP16-1A8MUX0 517 aa9.11□□□□□ -0.95
PNKP-230ENST00000638016 H3BQ85 93 aa9.11□□□□□ -0.95
PNKP-230ENST00000638016 TRACP01848 142 aa9.11□□□□□ -0.95
PNKP-230ENST00000638016 SCGB1C2P0DMR2 95 aa9.11□□□□□ -0.95
PNKP-230ENST00000638016 VPS25Q9BRG1 176 aa9.1□□□□□ -0.95
PNKP-230ENST00000638016 LINC00472Q9H8W2 130 aa9.1□□□□□ -0.95
PNKP-230ENST00000638016 NAA38Q9BRA0 125 aaKnown RBP9.09□□□□□ -0.95
PNKP-230ENST00000638016 LINC00313P59037 77 aa9.08□□□□□ -0.96
PNKP-230ENST00000638016 CRCT1Q9UGL9 99 aa9.06□□□□□ -0.96
PNKP-230ENST00000638016 IGHV6-1A0A0B4J1U7 121 aa9.04□□□□□ -0.96
PNKP-230ENST00000638016 RBM3P98179 157 aaKnown RBP9.04□□□□□ -0.96
PNKP-230ENST00000638016 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
PNKP-230ENST00000638016 DSCR8Q96T75 97 aa9.01□□□□□ -0.97
PNKP-230ENST00000638016 M0R143 59 aa8.97□□□□□ -0.97
PNKP-230ENST00000638016 TRBV20-1A0A075B6N2 111 aa8.96□□□□□ -0.98
PNKP-230ENST00000638016 A0A1B0GVX0 72 aa8.96□□□□□ -0.98
PNKP-230ENST00000638016 C9JAW5 83 aa8.96□□□□□ -0.98
PNKP-230ENST00000638016 ATXN8Q156A1 80 aa8.94□□□□□ -0.98
PNKP-230ENST00000638016 HRES1P13985 223 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms