RNA–Protein interactions for RNA: ENST00000630868.1

CDRT1-208, CMT1A duplicated region transcript 1, humanhuman

BASIC

Gene CDRT1, Length 794 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-208ENST00000630868 CRCT1Q9UGL9 99 aa2.59□□□□□ -1.99
CDRT1-208ENST00000630868 UBE2D4Q9Y2X8 147 aa2.59□□□□□ -1.99
CDRT1-208ENST00000630868 R4GN34 69 aa2.59□□□□□ -1.99
CDRT1-208ENST00000630868 MYMXA0A1B0GTQ4 84 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 A0A1B0GU33 70 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 ETDBQ3ZM63 59 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 Q6ZUT4 128 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 OR13C6PQ8NH95 151 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 PLEKHB2Q96CS7 222 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 NAA38Q9BRA0 125 aaKnown RBP2.58□□□□□ -2
CDRT1-208ENST00000630868 TTTY13Q9BZ97 58 aa2.58□□□□□ -2
CDRT1-208ENST00000630868 TRBV6-8A0A0A6YYG3 113 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 LEPROTO15243 131 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 IGHV3-30P01768 117 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 IGHV3-33P01772 117 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 MT-ATP8P03928 68 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 IGHV3-30-5P0DP03 117 aa2.57□□□□□ -2
CDRT1-208ENST00000630868 IGKV2-28A0A075B6P5 120 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.56□□□□□ -2
CDRT1-208ENST00000630868 A0A1B0GW54 56 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 IGKV2-29A2NJV5 120 aaPredicted RBP2.56□□□□□ -2
CDRT1-208ENST00000630868 J3QQQ9 107 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 IGKV2D-28P01615 120 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 SPINK8P0C7L1 97 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 TEN1Q86WV5 123 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 PPDPFLQ8WWR9 84 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 RAB37Q96AX2 223 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 LINC00167Q96N53 147 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 CDC42SE2Q9NRR3 84 aa2.56□□□□□ -2
CDRT1-208ENST00000630868 IGHV1-58A0A0C4DH39 117 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 ZNF815PA8K554 130 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 TMEM262E9PQX1 116 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 K7ERJ3 54 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 TIMM17BO60830 172 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 LGALS3P17931 250 aaKnown RBP2.55□□□□□ -2
CDRT1-208ENST00000630868 CIRBPQ14011 172 aaKnown RBP2.55□□□□□ -2
CDRT1-208ENST00000630868 TMEM170BQ5T4T1 132 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 C1orf64Q8NEQ6 169 aa2.55□□□□□ -2
CDRT1-208ENST00000630868 LPAP08519 4548 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 TRBV20-1A0A075B6N2 111 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 KRTAP10-8P60410 259 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 SFTA2Q6UW10 78 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 C9orf163Q8N9P6 203 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 SMCR5Q8TEV8 140 aa2.54□□□□□ -2
CDRT1-208ENST00000630868 NHP2Q9NX24 153 aaKnown RBP2.54□□□□□ -2
CDRT1-208ENST00000630868 NDUFA1O15239 70 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 IFITM1P13164 125 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 HRES1P13985 223 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 KRTAP13-2Q52LG2 175 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 LCE3EQ5T5B0 92 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 COPS9Q8WXC6 57 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 CDKN2A-AS1Q9UH64 79 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 NDUFA12Q9UI09 145 aa2.53□□□□□ -2
CDRT1-208ENST00000630868 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.52□□□□□ -2.01
CDRT1-208ENST00000630868 TRAV13-1A0A0B4J241 112 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 TRBV7-7A0A0K0K1E9 115 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 TCL1BO95988 128 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 COX6A2Q02221 97 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 SS18Q15532 418 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 ZNF625Q96I27 306 aaPredicted RBP2.52□□□□□ -2.01
CDRT1-208ENST00000630868 SPANXDQ9BXN6 97 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 SPANXCQ9NY87 97 aa2.52□□□□□ -2.01
CDRT1-208ENST00000630868 LINC00959A0A1B0GUT2 108 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 CCDC179H3BU77 68 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 XCL1P47992 114 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 CNBPP62633 177 aaKnown RBP2.51□□□□□ -2.01
CDRT1-208ENST00000630868 RPS28P62857 69 aaKnown RBP2.51□□□□□ -2.01
CDRT1-208ENST00000630868 MIAQ16674 131 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 KRTAP26-1Q6PEX3 210 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 ENHOQ6UWT2 76 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 IMUPQ9GZP8 106 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 TMEM126AQ9H061 195 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 PLAC8Q9NZF1 115 aa2.51□□□□□ -2.01
CDRT1-208ENST00000630868 TRBV30A0A0K0K1B3 111 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 A0A1B0GX51 115 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 H3BPC8 53 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 NDUFC2O95298 119 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 KRTAP10-5P60370 271 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 LYRM7Q5U5X0 104 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 Q8IZM0 81 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 SPACA4Q8TDM5 124 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 COX7B2Q8TF08 81 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 PRO1854Q9UHT4 67 aa2.5□□□□□ -2.01
CDRT1-208ENST00000630868 IGHV3-64A0A075B6Q5 118 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 LOC107984156A0A0G2JMH3 177 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 TRBV10-2A0A0K0K1G8 114 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 COX17Q14061 63 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 SPINK6Q6UWN8 80 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 C5orf38Q86SI9 138 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 MUSTN1Q8IVN3 82 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 ARL17AQ8IVW1 177 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 LINC00269Q8N2A0 174 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 LINC00308Q8TCZ7 52 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 XAGE1AQ9HD64 81 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 FSIP2Q5CZC0 6907 aa2.49□□□□□ -2.01
CDRT1-208ENST00000630868 GVQW2A0A096LPI5 108 aaPredicted RBP2.48□□□□□ -2.01
CDRT1-208ENST00000630868 H3BT86 120 aa2.48□□□□□ -2.01
CDRT1-208ENST00000630868 CRPP02741 224 aa2.48□□□□□ -2.01
CDRT1-208ENST00000630868 ANGP03950 147 aaKnown RBP2.48□□□□□ -2.01
CDRT1-208ENST00000630868 HIST1H4AP62805 103 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms