RNA–Protein interactions for RNA: ENST00000628696.2

SMN2-215, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 885 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-215ENST00000628696 VAMP3Q15836 100 aa9.9□□□□□ -0.82
SMN2-215ENST00000628696 ATP11AUNQ6ZP68 121 aa9.9□□□□□ -0.82
SMN2-215ENST00000628696 OBSCN-AS1Q96MR7 158 aa9.9□□□□□ -0.82
SMN2-215ENST00000628696 TRBV7-7A0A0K0K1E9 115 aa9.88□□□□□ -0.83
SMN2-215ENST00000628696 Q6JHZ5 121 aa9.88□□□□□ -0.83
SMN2-215ENST00000628696 LINC00575Q6W349 94 aa9.87□□□□□ -0.83
SMN2-215ENST00000628696 IGFL1Q6UW32 110 aa9.86□□□□□ -0.83
SMN2-215ENST00000628696 Q6ZQY7 126 aa9.86□□□□□ -0.83
SMN2-215ENST00000628696 CLEC2BQ92478 149 aa9.86□□□□□ -0.83
SMN2-215ENST00000628696 KRTAP3-3Q9BYR6 98 aa9.86□□□□□ -0.83
SMN2-215ENST00000628696 KRTAP3-2Q9BYR7 98 aa9.86□□□□□ -0.83
SMN2-215ENST00000628696 hADV29S1A0JD25 119 aa9.85□□□□□ -0.83
SMN2-215ENST00000628696 Q75L30 129 aa9.85□□□□□ -0.83
SMN2-215ENST00000628696 OCIAD2Q56VL3 154 aa9.84□□□□□ -0.83
SMN2-215ENST00000628696 COA6Q5JTJ3 125 aaKnown RBP9.82□□□□□ -0.84
SMN2-215ENST00000628696 Q96NJ1 140 aa9.8□□□□□ -0.84
SMN2-215ENST00000628696 LST1O00453 97 aa9.78□□□□□ -0.84
SMN2-215ENST00000628696 SNHG12Q9BXW3 62 aa9.77□□□□□ -0.85
SMN2-215ENST00000628696 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.76□□□□□ -0.85
SMN2-215ENST00000628696 H3BUT2 72 aa9.75□□□□□ -0.85
SMN2-215ENST00000628696 SNRPEP62304 92 aaKnown RBP9.75□□□□□ -0.85
SMN2-215ENST00000628696 CFC1P0CG37 223 aa9.73□□□□□ -0.85
SMN2-215ENST00000628696 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.71□□□□□ -0.86
SMN2-215ENST00000628696 PPDPFLQ8WWR9 84 aa9.71□□□□□ -0.86
SMN2-215ENST00000628696 TRBV20-1A0A075B6N2 111 aa9.7□□□□□ -0.86
SMN2-215ENST00000628696 KRTAP9-7A8MTY7 169 aa9.7□□□□□ -0.86
SMN2-215ENST00000628696 C12orf57Q99622 126 aa9.7□□□□□ -0.86
SMN2-215ENST00000628696 KRTAP9-8Q9BYQ0 159 aa9.7□□□□□ -0.86
SMN2-215ENST00000628696 SCGB1D1O95968 90 aa9.69□□□□□ -0.86
SMN2-215ENST00000628696 BVES-AS1Q5T3Y7 98 aa9.69□□□□□ -0.86
SMN2-215ENST00000628696 HSBP1L1C9JCN9 74 aa9.68□□□□□ -0.86
SMN2-215ENST00000628696 C20orf166-AS1Q96NR2 134 aa9.68□□□□□ -0.86
SMN2-215ENST00000628696 SS18L2Q9UHA2 77 aa9.68□□□□□ -0.86
SMN2-215ENST00000628696 A8MUU9 505 aa9.66□□□□□ -0.86
SMN2-215ENST00000628696 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
SMN2-215ENST00000628696 USH2AO75445 5202 aa9.63□□□□□ -0.87
SMN2-215ENST00000628696 TEN1Q86WV5 123 aa9.62□□□□□ -0.87
SMN2-215ENST00000628696 SSPOA2VEC9 5147 aa9.62□□□□□ -0.87
SMN2-215ENST00000628696 DSCR10P59022 87 aa9.61□□□□□ -0.87
SMN2-215ENST00000628696 A0A087WSZ3 146 aa9.6□□□□□ -0.87
SMN2-215ENST00000628696 SNCGO76070 127 aa9.59□□□□□ -0.87
SMN2-215ENST00000628696 S100A2P29034 98 aa9.59□□□□□ -0.87
SMN2-215ENST00000628696 FAM236DA0A1B0GTK5 79 aa9.58□□□□□ -0.88
SMN2-215ENST00000628696 FAM236CP0DP71 79 aa9.58□□□□□ -0.88
SMN2-215ENST00000628696 NDUFV3P56181 108 aaKnown RBP9.58□□□□□ -0.88
SMN2-215ENST00000628696 HIST1H2BLQ99880 126 aa9.58□□□□□ -0.88
SMN2-215ENST00000628696 HIST3H2BBQ8N257 126 aa9.57□□□□□ -0.88
SMN2-215ENST00000628696 MT2AP02795 61 aa9.54□□□□□ -0.88
SMN2-215ENST00000628696 SIGMAR1Q99720 223 aa9.54□□□□□ -0.88
SMN2-215ENST00000628696 H3BMG7 143 aa9.53□□□□□ -0.88
SMN2-215ENST00000628696 RAB37Q96AX2 223 aa9.53□□□□□ -0.88
SMN2-215ENST00000628696 FAM218AQ96MZ4 157 aa9.53□□□□□ -0.88
SMN2-215ENST00000628696 H0YGX0 51 aa9.52□□□□□ -0.89
SMN2-215ENST00000628696 KRTAP16-1A8MUX0 517 aa9.51□□□□□ -0.89
SMN2-215ENST00000628696 LINC00313P59037 77 aa9.51□□□□□ -0.89
SMN2-215ENST00000628696 FABP2P12104 132 aa9.5□□□□□ -0.89
SMN2-215ENST00000628696 COX8AP10176 69 aa9.49□□□□□ -0.89
SMN2-215ENST00000628696 RBM12B-AS1Q9P1G2 102 aa9.48□□□□□ -0.89
SMN2-215ENST00000628696 A0A1W2PNM2 257 aa9.46□□□□□ -0.9
SMN2-215ENST00000628696 GHRHP01286 108 aa9.46□□□□□ -0.9
SMN2-215ENST00000628696 MT1FP04733 61 aa9.46□□□□□ -0.9
SMN2-215ENST00000628696 IGKV4-1P06312 121 aa9.46□□□□□ -0.9
SMN2-215ENST00000628696 KRTAP19-1Q8IUB9 90 aa9.46□□□□□ -0.9
SMN2-215ENST00000628696 FCGBPQ9Y6R7 5405 aaPredicted RBP9.45□□□□□ -0.9
SMN2-215ENST00000628696 LCE2BO14633 110 aa9.45□□□□□ -0.9
SMN2-215ENST00000628696 KRTAP10-10P60014 251 aa9.45□□□□□ -0.9
SMN2-215ENST00000628696 A0A0B4J2C4 111 aa9.44□□□□□ -0.9
SMN2-215ENST00000628696 DLEU1O43261 78 aa9.43□□□□□ -0.9
SMN2-215ENST00000628696 S100A6P06703 90 aa9.43□□□□□ -0.9
SMN2-215ENST00000628696 HRES1P13985 223 aa9.43□□□□□ -0.9
SMN2-215ENST00000628696 C14orf144Q96I85 54 aa9.42□□□□□ -0.9
SMN2-215ENST00000628696 NOTCH2NLQ7Z3S9 236 aa9.41□□□□□ -0.9
SMN2-215ENST00000628696 A0A1B0GV72 72 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 A0A1B0GX51 115 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 DEFB116Q30KQ4 102 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 ANKRD29Q8N6D5 301 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 MPLKIPQ8TAP9 179 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 KRTAP9-3Q9BYQ3 159 aa9.4□□□□□ -0.9
SMN2-215ENST00000628696 HIGD1BQ9P298 99 aa9.37□□□□□ -0.91
SMN2-215ENST00000628696 IGHV6-1A0A0B4J1U7 121 aa9.36□□□□□ -0.91
SMN2-215ENST00000628696 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
SMN2-215ENST00000628696 PRO1854Q9UHT4 67 aa9.36□□□□□ -0.91
SMN2-215ENST00000628696 PAM16Q9Y3D7 125 aa9.34□□□□□ -0.91
SMN2-215ENST00000628696 CEND1Q8N111 149 aa9.33□□□□□ -0.92
SMN2-215ENST00000628696 LINC00472Q9H8W2 130 aa9.33□□□□□ -0.92
SMN2-215ENST00000628696 TRIAP1O43715 76 aa9.32□□□□□ -0.92
SMN2-215ENST00000628696 SPATA45Q537H7 98 aa9.32□□□□□ -0.92
SMN2-215ENST00000628696 C2orf91Q6ZV80 131 aa9.32□□□□□ -0.92
SMN2-215ENST00000628696 DNAL4O96015 105 aa9.31□□□□□ -0.92
SMN2-215ENST00000628696 ORMDL1Q9P0S3 153 aa9.31□□□□□ -0.92
SMN2-215ENST00000628696 TMEM238LA0A1B0GVL6 79 aa9.3□□□□□ -0.92
SMN2-215ENST00000628696 A6NJY4 79 aa9.3□□□□□ -0.92
SMN2-215ENST00000628696 TRACP01848 142 aa9.3□□□□□ -0.92
SMN2-215ENST00000628696 MTURNQ8N3F0 131 aa9.3□□□□□ -0.92
SMN2-215ENST00000628696 CCKP06307 115 aa9.29□□□□□ -0.92
SMN2-215ENST00000628696 FXYD2P54710 66 aa9.27□□□□□ -0.93
SMN2-215ENST00000628696 H3BQ85 93 aa9.26□□□□□ -0.93
SMN2-215ENST00000628696 TMEM256-PLSCR3K7ERE1 68 aa9.25□□□□□ -0.93
SMN2-215ENST00000628696 PSMB2P49721 201 aa9.25□□□□□ -0.93
SMN2-215ENST00000628696 VAMP8Q9BV40 100 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms