RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 TAL2Q16559 108 aa3.67□□□□□ -1.82
TCF4-249ENST00000625716 C6orf99Q4VX62 202 aa3.67□□□□□ -1.82
TCF4-249ENST00000625716 VAMP8Q9BV40 100 aa3.67□□□□□ -1.82
TCF4-249ENST00000625716 TRAV13-2A0A0B4J235 113 aa3.66□□□□□ -1.82
TCF4-249ENST00000625716 TRBV7-6A0A0J9YX20 115 aa3.66□□□□□ -1.82
TCF4-249ENST00000625716 A0A1B0GWB2 263 aa3.66□□□□□ -1.82
TCF4-249ENST00000625716 ELOF1P60002 83 aaKnown RBP3.66□□□□□ -1.82
TCF4-249ENST00000625716 ST20-AS1Q8NBB2 130 aa3.66□□□□□ -1.82
TCF4-249ENST00000625716 LAMTOR3Q9UHA4 124 aa3.66□□□□□ -1.82
TCF4-249ENST00000625716 A4D1N5 150 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 SMIM6P0DI80 62 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 COX8AP10176 69 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 VAMP3Q15836 100 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 PYY3Q5JQD4 70 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 FP248Q71RG6 208 aaPredicted RBP3.65□□□□□ -1.83
TCF4-249ENST00000625716 DEFB105AQ8NG35 78 aa3.65□□□□□ -1.83
TCF4-249ENST00000625716 NHP2Q9NX24 153 aaKnown RBP3.65□□□□□ -1.83
TCF4-249ENST00000625716 SLC25A20O43772 301 aa3.64□□□□□ -1.83
TCF4-249ENST00000625716 RPS29P62273 56 aaKnown RBP3.64□□□□□ -1.83
TCF4-249ENST00000625716 TPRXLQ17RH7 258 aa3.64□□□□□ -1.83
TCF4-249ENST00000625716 A0A0U1RQV1 116 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 TEX49A0A1B0GTD5 131 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 SPRR1BP22528 89 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 SPATA45Q537H7 98 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 HIST1H4GQ99525 98 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 HIGD1BQ9P298 99 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 PAM16Q9Y3D7 125 aa3.63□□□□□ -1.83
TCF4-249ENST00000625716 LRP2P98164 4655 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 Q1RN00 199 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 HRCT1Q6UXD1 115 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 SMIM11BQ8TCY0 68 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 LIMD2Q9BT23 127 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 PRO1933Q9H354 126 aa3.62□□□□□ -1.83
TCF4-249ENST00000625716 Q8N377 158 aa3.61□□□□□ -1.83
TCF4-249ENST00000625716 LPAP08519 4548 aa3.61□□□□□ -1.83
TCF4-249ENST00000625716 F8WEM9 126 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 H7C2G1 150 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 SNCGO76070 127 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 MPLKIPQ8TAP9 179 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 C14orf144Q96I85 54 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 UQCR10Q9UDW1 63 aa3.6□□□□□ -1.83
TCF4-249ENST00000625716 LOC105371267A0A1B0GV96 52 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 hADV29S1A0JD25 119 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 CD164Q04900 197 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 BVES-AS1Q5T3Y7 98 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 RAB37Q96AX2 223 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 C12orf57Q99622 126 aa3.59□□□□□ -1.83
TCF4-249ENST00000625716 IGLV5-48A0A075B6I7 105 aa3.58□□□□□ -1.84
TCF4-249ENST00000625716 KRTAP13-3Q3SY46 172 aa3.58□□□□□ -1.84
TCF4-249ENST00000625716 LINC00575Q6W349 94 aa3.58□□□□□ -1.84
TCF4-249ENST00000625716 TSTD3H0UI37 97 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 LINC01547P58512 204 aaPredicted RBP3.57□□□□□ -1.84
TCF4-249ENST00000625716 SEC61BP60468 96 aaKnown RBP3.57□□□□□ -1.84
TCF4-249ENST00000625716 HSD52Q0P140 79 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 Q6ZQY7 126 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 C2orf91Q6ZV80 131 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 SMIM29Q86T20 159 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 RNF213Q63HN8 5207 aa3.57□□□□□ -1.84
TCF4-249ENST00000625716 SNHG12Q9BXW3 62 aa3.56□□□□□ -1.84
TCF4-249ENST00000625716 H0YGX0 51 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 TCL1BO95988 128 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 CFC1BP0CG36 223 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 CFC1P0CG37 223 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 Q6JHZ5 121 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.55□□□□□ -1.84
TCF4-249ENST00000625716 CEND1Q8N111 149 aa3.55□□□□□ -1.84
TCF4-249ENST00000625716 A0A0B4J2C4 111 aa3.54□□□□□ -1.84
TCF4-249ENST00000625716 M0R143 59 aa3.54□□□□□ -1.84
TCF4-249ENST00000625716 ASB16-AS1Q495Z4 193 aa3.54□□□□□ -1.84
TCF4-249ENST00000625716 OCIAD2Q56VL3 154 aa3.54□□□□□ -1.84
TCF4-249ENST00000625716 PPDPFLQ8WWR9 84 aa3.54□□□□□ -1.84
TCF4-249ENST00000625716 A0A0G2JQZ4 141 aa3.53□□□□□ -1.84
TCF4-249ENST00000625716 C9orf92A6NGG3 77 aa3.53□□□□□ -1.84
TCF4-249ENST00000625716 Q5XG85 94 aa3.53□□□□□ -1.84
TCF4-249ENST00000625716 PRO1854Q9UHT4 67 aa3.53□□□□□ -1.84
TCF4-249ENST00000625716 CLEC2BQ92478 149 aa3.52□□□□□ -1.85
TCF4-249ENST00000625716 IGLV8-61A0A075B6I0 122 aa3.51□□□□□ -1.85
TCF4-249ENST00000625716 C1orf195Q5TG92 126 aa3.51□□□□□ -1.85
TCF4-249ENST00000625716 IGFL1Q6UW32 110 aa3.51□□□□□ -1.85
TCF4-249ENST00000625716 TRBV7-7A0A0K0K1E9 115 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 A0A1B0GX51 115 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 COX6CP09669 75 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 FABP2P12104 132 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 PSMB2P49721 201 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 FXYD2P54710 66 aa3.5□□□□□ -1.85
TCF4-249ENST00000625716 H3BUT2 72 aa3.49□□□□□ -1.85
TCF4-249ENST00000625716 DNAL4O96015 105 aa3.49□□□□□ -1.85
TCF4-249ENST00000625716 MT3P25713 68 aa3.49□□□□□ -1.85
TCF4-249ENST00000625716 NDUFV3P56181 108 aaKnown RBP3.49□□□□□ -1.85
TCF4-249ENST00000625716 H3BMG7 143 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 LST1O00453 97 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 FAM218AQ96MZ4 157 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 SS18L2Q9UHA2 77 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 MUC2Q02817 5179 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 MUC17Q685J3 4493 aa3.48□□□□□ -1.85
TCF4-249ENST00000625716 H3BQ85 93 aa3.47□□□□□ -1.85
TCF4-249ENST00000625716 PCOTHQ58A44 107 aa3.47□□□□□ -1.85
TCF4-249ENST00000625716 TEN1Q86WV5 123 aa3.47□□□□□ -1.85
TCF4-249ENST00000625716 K7ERJ3 54 aa3.46□□□□□ -1.86
TCF4-249ENST00000625716 SCGB1C2P0DMR2 95 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms