RNA–Protein interactions for RNA: ENST00000625662.2

CHD2-205, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 5

Gene CHD2, Length 5,127 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-205ENST00000625662 A0A0C4DFX4 3053 aa7.32□□□□□ -1.24
CHD2-205ENST00000625662 IGLV5-48A0A075B6I7 105 aa7.3□□□□□ -1.24
CHD2-205ENST00000625662 UTRNP46939 3433 aa7.3□□□□□ -1.24
CHD2-205ENST00000625662 PRRC2CQ9Y520 2896 aaKnown RBP7.3□□□□□ -1.24
CHD2-205ENST00000625662 GCN1Q92616 2671 aaKnown RBP7.29□□□□□ -1.24
CHD2-205ENST00000625662 CSAG1Q6PB30 78 aa7.29□□□□□ -1.24
CHD2-205ENST00000625662 CENPEQ02224 2701 aa7.29□□□□□ -1.24
CHD2-205ENST00000625662 FP248Q71RG6 208 aaPredicted RBP7.29□□□□□ -1.24
CHD2-205ENST00000625662 KRTAP1-5Q9BYS1 174 aa7.29□□□□□ -1.24
CHD2-205ENST00000625662 KRTAP10-2P60368 255 aa7.27□□□□□ -1.25
CHD2-205ENST00000625662 CHD6Q8TD26 2715 aa7.25□□□□□ -1.25
CHD2-205ENST00000625662 ASB16-AS1Q495Z4 193 aa7.24□□□□□ -1.25
CHD2-205ENST00000625662 TEX15Q9BXT5 2789 aa7.24□□□□□ -1.25
CHD2-205ENST00000625662 SPRR1AP35321 89 aa7.23□□□□□ -1.25
CHD2-205ENST00000625662 SPRR1BP22528 89 aa7.23□□□□□ -1.25
CHD2-205ENST00000625662 A0A1W2PNM2 257 aa7.22□□□□□ -1.25
CHD2-205ENST00000625662 KRTAP26-1Q6PEX3 210 aa7.18□□□□□ -1.26
CHD2-205ENST00000625662 CYSTM1Q9H1C7 97 aa7.18□□□□□ -1.26
CHD2-205ENST00000625662 HTTP42858 3142 aa7.18□□□□□ -1.26
CHD2-205ENST00000625662 A0A0G2JQZ4 141 aa7.16□□□□□ -1.26
CHD2-205ENST00000625662 LINC01558Q9Y6Z2 57 aa7.16□□□□□ -1.26
CHD2-205ENST00000625662 KMT2BQ9UMN6 2715 aaPredicted RBP7.16□□□□□ -1.26
CHD2-205ENST00000625662 AKAP13Q12802 2813 aa7.16□□□□□ -1.26
CHD2-205ENST00000625662 Q5VV11 94 aa7.15□□□□□ -1.26
CHD2-205ENST00000625662 Q8N9P0 234 aaPredicted RBP7.15□□□□□ -1.27
CHD2-205ENST00000625662 ZCCHC13Q8WW36 166 aaKnown RBP7.13□□□□□ -1.27
CHD2-205ENST00000625662 FAM104AQ969W3 186 aa7.12□□□□□ -1.27
CHD2-205ENST00000625662 Q8N1X5 172 aa7.12□□□□□ -1.27
CHD2-205ENST00000625662 LINC00483Q53H64 154 aa7.1□□□□□ -1.27
CHD2-205ENST00000625662 ITPR2Q14571 2701 aa7.08□□□□□ -1.28
CHD2-205ENST00000625662 RPS29P62273 56 aaKnown RBP7.08□□□□□ -1.28
CHD2-205ENST00000625662 HRES1P13985 223 aa7.07□□□□□ -1.28
CHD2-205ENST00000625662 Q6ZRN7 208 aaPredicted RBP7.07□□□□□ -1.28
CHD2-205ENST00000625662 SPINK7P58062 85 aa7.06□□□□□ -1.28
CHD2-205ENST00000625662 NOTCH1P46531 2555 aa7.05□□□□□ -1.28
CHD2-205ENST00000625662 DSPP15924 2871 aaKnown RBP7.05□□□□□ -1.28
CHD2-205ENST00000625662 OCR1Q9BZK8 76 aa7.05□□□□□ -1.28
CHD2-205ENST00000625662 RANBP2P49792 3224 aaKnown RBP7.04□□□□□ -1.28
CHD2-205ENST00000625662 NSD1Q96L73 2696 aaPredicted RBP7.04□□□□□ -1.28
CHD2-205ENST00000625662 MGAQ8IWI9 3026 aa7.03□□□□□ -1.28
CHD2-205ENST00000625662 S4R3F8 94 aa7□□□□□ -1.29
CHD2-205ENST00000625662 LAMA2P24043 3122 aaKnown RBP6.98□□□□□ -1.29
CHD2-205ENST00000625662 A0A0D9SG42 100 aa6.98□□□□□ -1.29
CHD2-205ENST00000625662 A0A1B0GU33 70 aa6.97□□□□□ -1.29
CHD2-205ENST00000625662 NDUFAF8A1L188 74 aa6.96□□□□□ -1.3
CHD2-205ENST00000625662 A6NN06 94 aa6.95□□□□□ -1.3
CHD2-205ENST00000625662 HIVEP1P15822 2718 aa6.95□□□□□ -1.3
CHD2-205ENST00000625662 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
CHD2-205ENST00000625662 C5orf42Q9H799 3197 aa6.94□□□□□ -1.3
CHD2-205ENST00000625662 PANO1I0J062 215 aa6.94□□□□□ -1.3
CHD2-205ENST00000625662 LINC00472Q9H8W2 130 aa6.94□□□□□ -1.3
CHD2-205ENST00000625662 MAP1AP78559 2803 aaPredicted RBP6.93□□□□□ -1.3
CHD2-205ENST00000625662 NBEAL1Q6ZS30 2694 aa6.93□□□□□ -1.3
CHD2-205ENST00000625662 Q8NDZ9 215 aa6.92□□□□□ -1.3
CHD2-205ENST00000625662 BRCA2P51587 3418 aa6.92□□□□□ -1.3
CHD2-205ENST00000625662 UBR5O95071 2799 aaPredicted RBP6.91□□□□□ -1.3
CHD2-205ENST00000625662 LAMA3Q16787 3333 aa6.9□□□□□ -1.31
CHD2-205ENST00000625662 ROMO1P60602 79 aa6.9□□□□□ -1.31
CHD2-205ENST00000625662 KRTAP4-16G5E9R7 235 aaPredicted RBP6.88□□□□□ -1.31
CHD2-205ENST00000625662 A0A087X002 238 aa6.86□□□□□ -1.31
CHD2-205ENST00000625662 KRTAP25-1Q3LHN0 102 aa6.86□□□□□ -1.31
CHD2-205ENST00000625662 Q5W150 140 aa6.86□□□□□ -1.31
CHD2-205ENST00000625662 FLNCQ14315 2725 aa6.85□□□□□ -1.31
CHD2-205ENST00000625662 STAB2Q8WWQ8 2551 aa6.83□□□□□ -1.32
CHD2-205ENST00000625662 MKI67P46013 3256 aaKnown RBP6.83□□□□□ -1.32
CHD2-205ENST00000625662 R4GN34 69 aa6.82□□□□□ -1.32
CHD2-205ENST00000625662 ITPR1Q14643 2758 aa6.8□□□□□ -1.32
CHD2-205ENST00000625662 TENM4Q6N022 2769 aa6.79□□□□□ -1.32
CHD2-205ENST00000625662 UNC80Q8N2C7 3258 aa6.77□□□□□ -1.32
CHD2-205ENST00000625662 XIRP2A4UGR9 3374 aa6.77□□□□□ -1.33
CHD2-205ENST00000625662 TNRC18O15417 2968 aaPredicted RBP6.76□□□□□ -1.33
CHD2-205ENST00000625662 PLAC4Q8WY50 150 aa6.75□□□□□ -1.33
CHD2-205ENST00000625662 RPL37P61927 97 aaKnown RBP6.74□□□□□ -1.33
CHD2-205ENST00000625662 KRTAP13-1Q8IUC0 172 aa6.73□□□□□ -1.33
CHD2-205ENST00000625662 APCP25054 2843 aa6.72□□□□□ -1.33
CHD2-205ENST00000625662 SPATA8Q6RVD6 105 aa6.72□□□□□ -1.33
CHD2-205ENST00000625662 H1FX-AS1Q4G0G2 97 aa6.71□□□□□ -1.33
CHD2-205ENST00000625662 KRTAP13-2Q52LG2 175 aa6.7□□□□□ -1.34
CHD2-205ENST00000625662 CFAP54Q96N23 3096 aa6.7□□□□□ -1.34
CHD2-205ENST00000625662 PRUNE2Q8WUY3 3088 aa6.7□□□□□ -1.34
CHD2-205ENST00000625662 C20orf166-AS1Q96NR2 134 aa6.7□□□□□ -1.34
CHD2-205ENST00000625662 WDFY4Q6ZS81 3184 aa6.7□□□□□ -1.34
CHD2-205ENST00000625662 UTP20O75691 2785 aaKnown RBP6.67□□□□□ -1.34
CHD2-205ENST00000625662 DMBT1Q9UGM3 2413 aaPredicted RBP6.67□□□□□ -1.34
CHD2-205ENST00000625662 ADM2Q7Z4H4 148 aa6.66□□□□□ -1.34
CHD2-205ENST00000625662 KRTAP11-1Q8IUC1 163 aa6.66□□□□□ -1.34
CHD2-205ENST00000625662 DNAH14Q0VDD8 3507 aa6.65□□□□□ -1.35
CHD2-205ENST00000625662 TRIOO75962 3097 aa6.65□□□□□ -1.35
CHD2-205ENST00000625662 M0QZ58 72 aa6.64□□□□□ -1.35
CHD2-205ENST00000625662 KRTAP29-1A8MX34 341 aaPredicted RBP6.63□□□□□ -1.35
CHD2-205ENST00000625662 KRTAP7-1Q8IUC3 87 aa6.62□□□□□ -1.35
CHD2-205ENST00000625662 FLG2Q5D862 2391 aaPredicted RBP6.6□□□□□ -1.35
CHD2-205ENST00000625662 NBEAQ8NFP9 2946 aa6.6□□□□□ -1.35
CHD2-205ENST00000625662 NIPBLQ6KC79 2804 aaeCLIP6.58□□□□□ -1.366e-7■□□□□ 10.3
CHD2-205ENST00000625662 A8MU10 97 aa6.58□□□□□ -1.36
CHD2-205ENST00000625662 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
CHD2-205ENST00000625662 CDH23Q9H251 3354 aa6.58□□□□□ -1.36
CHD2-205ENST00000625662 NOTCH2NLQ7Z3S9 236 aa6.57□□□□□ -1.36
CHD2-205ENST00000625662 LAMA1P25391 3075 aa6.57□□□□□ -1.36
CHD2-205ENST00000625662 NBEAL2Q6ZNJ1 2754 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms