RNA–Protein interactions for RNA: ENST00000621181.4

CLK1-215, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CLK1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-215ENST00000621181 LCE4AQ5TA78 99 aa4.75□□□□□ -1.65
CLK1-215ENST00000621181 PHF5AQ7RTV0 110 aaKnown RBP4.75□□□□□ -1.65
CLK1-215ENST00000621181 MUC2Q02817 5179 aa4.74□□□□□ -1.65
CLK1-215ENST00000621181 B5MCH6 92 aa4.74□□□□□ -1.65
CLK1-215ENST00000621181 DNAL4O96015 105 aa4.74□□□□□ -1.65
CLK1-215ENST00000621181 IGLV7-43P04211 117 aa4.74□□□□□ -1.65
CLK1-215ENST00000621181 HIST1H4AP62805 103 aaKnown RBP4.74□□□□□ -1.65
CLK1-215ENST00000621181 C10orf25Q5T742 122 aa4.74□□□□□ -1.65
CLK1-215ENST00000621181 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
CLK1-215ENST00000621181 H0Y9J4 135 aa4.73□□□□□ -1.65
CLK1-215ENST00000621181 GAGE2AQ6NT46 116 aa4.73□□□□□ -1.65
CLK1-215ENST00000621181 OR13C6PQ8NH95 151 aa4.73□□□□□ -1.65
CLK1-215ENST00000621181 C14orf132Q9NPU4 83 aa4.73□□□□□ -1.65
CLK1-215ENST00000621181 IGLV1-50A0A075B6I6 118 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 NCR3O14931 201 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 SPAG11BQ08648 103 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 C2orf48Q96LS8 159 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 TMEM126AQ9H061 195 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 LINC00846Q9NV44 126 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 ORMDL1Q9P0S3 153 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 FAM236AA0A1B0GUQ0 79 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 FAM236BA0A1B0GV22 79 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 UNQ6190/PRO20217Q6UXQ8 127 aa4.72□□□□□ -1.65
CLK1-215ENST00000621181 IGLV6-57P01721 117 aa4.71□□□□□ -1.66
CLK1-215ENST00000621181 Q6JHZ5 121 aa4.71□□□□□ -1.66
CLK1-215ENST00000621181 SS18L2Q9UHA2 77 aa4.71□□□□□ -1.66
CLK1-215ENST00000621181 FAM168BA1KXE4 195 aa4.7□□□□□ -1.66
CLK1-215ENST00000621181 CCKP06307 115 aa4.7□□□□□ -1.66
CLK1-215ENST00000621181 LINC00575Q6W349 94 aa4.7□□□□□ -1.66
CLK1-215ENST00000621181 FAM19A5Q7Z5A7 132 aaPredicted RBP4.7□□□□□ -1.66
CLK1-215ENST00000621181 KRTAP1-4P0C5Y4 121 aa4.69□□□□□ -1.66
CLK1-215ENST00000621181 UBE2BP63146 152 aa4.69□□□□□ -1.66
CLK1-215ENST00000621181 C6orf99Q4VX62 202 aa4.69□□□□□ -1.66
CLK1-215ENST00000621181 KRTAP11-1Q8IUC1 163 aa4.69□□□□□ -1.66
CLK1-215ENST00000621181 C6orf48Q9UBA6 75 aa4.69□□□□□ -1.66
CLK1-215ENST00000621181 JMJD7-PLA2G4BH0Y9G9 81 aa4.68□□□□□ -1.66
CLK1-215ENST00000621181 TMEM256-PLSCR3K7ERE1 68 aa4.68□□□□□ -1.66
CLK1-215ENST00000621181 KRTAP19-4Q3LI73 84 aa4.68□□□□□ -1.66
CLK1-215ENST00000621181 C3orf22Q8N5N4 141 aa4.67□□□□□ -1.66
CLK1-215ENST00000621181 F8WDY8 70 aa4.67□□□□□ -1.66
CLK1-215ENST00000621181 LOC110117498A0A087WWA1 95 aa4.66□□□□□ -1.66
CLK1-215ENST00000621181 IGKV3D-7A0A0C4DH55 119 aa4.66□□□□□ -1.66
CLK1-215ENST00000621181 UQCRQO14949 82 aa4.66□□□□□ -1.66
CLK1-215ENST00000621181 TLX1NBP0CAT3 122 aa4.66□□□□□ -1.66
CLK1-215ENST00000621181 KRTAP9-7A8MTY7 169 aa4.65□□□□□ -1.66
CLK1-215ENST00000621181 COX7CP15954 63 aa4.65□□□□□ -1.66
CLK1-215ENST00000621181 Q6ZQT0 140 aa4.65□□□□□ -1.66
CLK1-215ENST00000621181 TRBV10-3A0A0K0K1G6 114 aa4.65□□□□□ -1.67
CLK1-215ENST00000621181 hADV29S1A0JD25 119 aa4.65□□□□□ -1.67
CLK1-215ENST00000621181 ATOX1O00244 68 aa4.65□□□□□ -1.67
CLK1-215ENST00000621181 VPREB1P12018 145 aa4.65□□□□□ -1.67
CLK1-215ENST00000621181 S100A7L2Q5SY68 101 aa4.65□□□□□ -1.67
CLK1-215ENST00000621181 TRBV7-6A0A0J9YX20 115 aa4.64□□□□□ -1.67
CLK1-215ENST00000621181 CRYGAP11844 174 aa4.64□□□□□ -1.67
CLK1-215ENST00000621181 KRTAP7-1Q8IUC3 87 aa4.64□□□□□ -1.67
CLK1-215ENST00000621181 A0A087WVE0 104 aa4.63□□□□□ -1.67
CLK1-215ENST00000621181 NDUFC2-KCTD14E9PQ53 114 aa4.63□□□□□ -1.67
CLK1-215ENST00000621181 ZNF861PO60384 105 aa4.63□□□□□ -1.67
CLK1-215ENST00000621181 ATP5EP2Q5VTU8 51 aa4.63□□□□□ -1.67
CLK1-215ENST00000621181 TRAV23DV6A0A075B6W5 121 aa4.62□□□□□ -1.67
CLK1-215ENST00000621181 H3BQ85 93 aa4.62□□□□□ -1.67
CLK1-215ENST00000621181 XAGE1AQ9HD64 81 aa4.62□□□□□ -1.67
CLK1-215ENST00000621181 ZNF73O43830 326 aaPredicted RBP4.62□□□□□ -1.67
CLK1-215ENST00000621181 ELOF1P60002 83 aaKnown RBP4.62□□□□□ -1.67
CLK1-215ENST00000621181 RBM3P98179 157 aaKnown RBP4.62□□□□□ -1.67
CLK1-215ENST00000621181 C9orf153Q5TBE3 101 aa4.62□□□□□ -1.67
CLK1-215ENST00000621181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.62□□□□□ -1.67
CLK1-215ENST00000621181 Q6ZQY7 126 aa4.61□□□□□ -1.67
CLK1-215ENST00000621181 SERP2Q8N6R1 65 aa4.61□□□□□ -1.67
CLK1-215ENST00000621181 TYMSOSQ8TAI1 123 aa4.61□□□□□ -1.67
CLK1-215ENST00000621181 KRTAP4-7Q9BYR0 210 aa4.61□□□□□ -1.67
CLK1-215ENST00000621181 CYSTM1Q9H1C7 97 aa4.61□□□□□ -1.67
CLK1-215ENST00000621181 A0A087X002 238 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 TRBV7-4A0A0J9YYF1 115 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 M0R378 163 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 COX7BP24311 80 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 FAM19A1Q7Z5A9 133 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 PDE6GP18545 87 aa4.6□□□□□ -1.67
CLK1-215ENST00000621181 LCE1DQ5T752 114 aa4.59□□□□□ -1.67
CLK1-215ENST00000621181 RETNLBQ9BQ08 111 aa4.59□□□□□ -1.67
CLK1-215ENST00000621181 SMIM20Q8N5G0 67 aa4.58□□□□□ -1.68
CLK1-215ENST00000621181 SVIPQ8NHG7 77 aa4.58□□□□□ -1.68
CLK1-215ENST00000621181 UBL5Q9BZL1 73 aa4.58□□□□□ -1.68
CLK1-215ENST00000621181 Q6ZVQ6 151 aa4.58□□□□□ -1.68
CLK1-215ENST00000621181 MRPL55Q7Z7F7 128 aaKnown RBP4.58□□□□□ -1.68
CLK1-215ENST00000621181 LAMTOR3Q9UHA4 124 aa4.58□□□□□ -1.68
CLK1-215ENST00000621181 BCE1O60756 84 aa4.57□□□□□ -1.68
CLK1-215ENST00000621181 LINC01547P58512 204 aaPredicted RBP4.57□□□□□ -1.68
CLK1-215ENST00000621181 KCNQ1DNQ9H478 68 aa4.57□□□□□ -1.68
CLK1-215ENST00000621181 ANAPC11Q9NYG5 84 aa4.57□□□□□ -1.68
CLK1-215ENST00000621181 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CLK1-215ENST00000621181 DSCR8Q96T75 97 aa4.56□□□□□ -1.68
CLK1-215ENST00000621181 IGLV5-37A0A075B6J1 123 aa4.56□□□□□ -1.68
CLK1-215ENST00000621181 CXCL6P80162 114 aa4.56□□□□□ -1.68
CLK1-215ENST00000621181 RPL37AP8A6NKH3 93 aa4.55□□□□□ -1.68
CLK1-215ENST00000621181 KRTAP4-16G5E9R7 235 aaPredicted RBP4.55□□□□□ -1.68
CLK1-215ENST00000621181 LINC00304Q8N9R0 145 aa4.55□□□□□ -1.68
CLK1-215ENST00000621181 IGLV7-46A0A075B6I9 117 aa4.54□□□□□ -1.68
CLK1-215ENST00000621181 UBE2AP49459 152 aa4.54□□□□□ -1.68
CLK1-215ENST00000621181 RPS28P62857 69 aaKnown RBP4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 240.7 ms