RNA–Protein interactions for RNA: ENST00000619438.4

SGMS1-210, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-210ENST00000619438 RPL37AP8A6NKH3 93 aa13.52□□□□□ -0.25
SGMS1-210ENST00000619438 FAM19A5Q7Z5A7 132 aaPredicted RBP13.51□□□□□ -0.25
SGMS1-210ENST00000619438 ETDCA0A1B0GVM5 59 aa13.5□□□□□ -0.25
SGMS1-210ENST00000619438 HIST1H4AP62805 103 aaKnown RBP13.5□□□□□ -0.25
SGMS1-210ENST00000619438 IGKV3D-7A0A0C4DH55 119 aa13.49□□□□□ -0.25
SGMS1-210ENST00000619438 A0A096LNI7 61 aa13.48□□□□□ -0.25
SGMS1-210ENST00000619438 Q9BRP9 147 aa13.48□□□□□ -0.25
SGMS1-210ENST00000619438 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-210ENST00000619438 LINC01547P58512 204 aaPredicted RBP13.47□□□□□ -0.25
SGMS1-210ENST00000619438 Q8N377 158 aa13.47□□□□□ -0.25
SGMS1-210ENST00000619438 PKIGQ9Y2B9 76 aa13.47□□□□□ -0.25
SGMS1-210ENST00000619438 VPS13BQ7Z7G8 4022 aa13.45□□□□□ -0.26
SGMS1-210ENST00000619438 PLA2G1BP04054 148 aaKnown RBP13.45□□□□□ -0.26
SGMS1-210ENST00000619438 PANO1I0J062 215 aa13.44□□□□□ -0.26
SGMS1-210ENST00000619438 REG3GQ6UW15 175 aa13.44□□□□□ -0.26
SGMS1-210ENST00000619438 IGLV5-48A0A075B6I7 105 aa13.44□□□□□ -0.26
SGMS1-210ENST00000619438 CHTF8P0CG12 524 aa13.43□□□□□ -0.26
SGMS1-210ENST00000619438 IGKV2-24A0A0C4DH68 120 aa13.41□□□□□ -0.26
SGMS1-210ENST00000619438 A0A1W2PNN7 141 aa13.4□□□□□ -0.26
SGMS1-210ENST00000619438 Q6ZVQ6 151 aa13.4□□□□□ -0.26
SGMS1-210ENST00000619438 ATOX1O00244 68 aa13.4□□□□□ -0.26
SGMS1-210ENST00000619438 SPACA4Q8TDM5 124 aa13.38□□□□□ -0.27
SGMS1-210ENST00000619438 CCDC179H3BU77 68 aa13.37□□□□□ -0.27
SGMS1-210ENST00000619438 DEFB105AQ8NG35 78 aa13.37□□□□□ -0.27
SGMS1-210ENST00000619438 CXCL6P80162 114 aa13.36□□□□□ -0.27
SGMS1-210ENST00000619438 LINC00474Q9P2X8 69 aa13.36□□□□□ -0.27
SGMS1-210ENST00000619438 A0A1B0GW54 56 aa13.35□□□□□ -0.27
SGMS1-210ENST00000619438 UBE2BP63146 152 aa13.35□□□□□ -0.27
SGMS1-210ENST00000619438 A0A087WVE0 104 aa13.34□□□□□ -0.27
SGMS1-210ENST00000619438 ERC2-IT1O76042 136 aa13.33□□□□□ -0.28
SGMS1-210ENST00000619438 ST20-AS1Q8NBB2 130 aa13.32□□□□□ -0.28
SGMS1-210ENST00000619438 RPL37AP61513 92 aaKnown RBP13.31□□□□□ -0.28
SGMS1-210ENST00000619438 PLAC8Q9NZF1 115 aa13.31□□□□□ -0.28
SGMS1-210ENST00000619438 MYCBP2O75592 4640 aa13.31□□□□□ -0.28
SGMS1-210ENST00000619438 FLG2Q5D862 2391 aaPredicted RBP13.31□□□□□ -0.28
SGMS1-210ENST00000619438 FAM19A1Q7Z5A9 133 aa13.3□□□□□ -0.28
SGMS1-210ENST00000619438 UQCRQO14949 82 aa13.29□□□□□ -0.28
SGMS1-210ENST00000619438 H0Y9J4 135 aa13.28□□□□□ -0.28
SGMS1-210ENST00000619438 C3orf22Q8N5N4 141 aa13.28□□□□□ -0.28
SGMS1-210ENST00000619438 COX7CP15954 63 aa13.27□□□□□ -0.29
SGMS1-210ENST00000619438 PHF5AQ7RTV0 110 aaKnown RBP13.25□□□□□ -0.29
SGMS1-210ENST00000619438 SMIM29Q86T20 159 aa13.24□□□□□ -0.29
SGMS1-210ENST00000619438 BCE1O60756 84 aa13.24□□□□□ -0.29
SGMS1-210ENST00000619438 C1orf137Q5JT78 98 aa13.24□□□□□ -0.29
SGMS1-210ENST00000619438 KRTAP10-4P60372 401 aaPredicted RBP13.23□□□□□ -0.29
SGMS1-210ENST00000619438 DMBT1Q9UGM3 2413 aaPredicted RBP13.22□□□□□ -0.29
SGMS1-210ENST00000619438 SERP2Q8N6R1 65 aa13.22□□□□□ -0.29
SGMS1-210ENST00000619438 A0A1W2PNM2 257 aa13.21□□□□□ -0.29
SGMS1-210ENST00000619438 PRLHP81277 87 aa13.21□□□□□ -0.29
SGMS1-210ENST00000619438 Q8NBF4 154 aa13.21□□□□□ -0.29
SGMS1-210ENST00000619438 NREPQ16612 68 aa13.21□□□□□ -0.3
SGMS1-210ENST00000619438 KRTAP11-1Q8IUC1 163 aa13.21□□□□□ -0.3
SGMS1-210ENST00000619438 SPRR4Q96PI1 79 aa13.21□□□□□ -0.3
SGMS1-210ENST00000619438 IGLV8-61A0A075B6I0 122 aa13.18□□□□□ -0.3
SGMS1-210ENST00000619438 F8WEM9 126 aa13.17□□□□□ -0.3
SGMS1-210ENST00000619438 C9orf153Q5TBE3 101 aa13.17□□□□□ -0.3
SGMS1-210ENST00000619438 HERC1Q15751 4861 aa13.16□□□□□ -0.3
SGMS1-210ENST00000619438 CRYGAP11844 174 aa13.16□□□□□ -0.3
SGMS1-210ENST00000619438 SPRR1BP22528 89 aa13.16□□□□□ -0.3
SGMS1-210ENST00000619438 HIGD2AQ9BW72 106 aa13.16□□□□□ -0.3
SGMS1-210ENST00000619438 J3QL48 77 aa13.14□□□□□ -0.31
SGMS1-210ENST00000619438 KRTAP13-1Q8IUC0 172 aa13.12□□□□□ -0.31
SGMS1-210ENST00000619438 SMIM20Q8N5G0 67 aa13.12□□□□□ -0.31
SGMS1-210ENST00000619438 BPY2O14599 106 aa13.1□□□□□ -0.31
SGMS1-210ENST00000619438 UBE2AP49459 152 aa13.09□□□□□ -0.31
SGMS1-210ENST00000619438 KRTAP29-1A8MX34 341 aaPredicted RBP13.08□□□□□ -0.32
SGMS1-210ENST00000619438 IGFL1Q6UW32 110 aa13.08□□□□□ -0.32
SGMS1-210ENST00000619438 IGKV4-1P06312 121 aa13.07□□□□□ -0.32
SGMS1-210ENST00000619438 LRP1Q07954 4544 aaKnown RBP13.06□□□□□ -0.32
SGMS1-210ENST00000619438 TRAV7A0A075B6U4 112 aa13.05□□□□□ -0.32
SGMS1-210ENST00000619438 SS18L2Q9UHA2 77 aa13.05□□□□□ -0.32
SGMS1-210ENST00000619438 OXTP01178 125 aa13.05□□□□□ -0.32
SGMS1-210ENST00000619438 PKHD1L1Q86WI1 4243 aa13.04□□□□□ -0.32
SGMS1-210ENST00000619438 PSORS1C2Q9UIG4 136 aa13.02□□□□□ -0.33
SGMS1-210ENST00000619438 Q8N9L7 120 aa12.98□□□□□ -0.33
SGMS1-210ENST00000619438 FAT3Q8TDW7 4589 aa12.97□□□□□ -0.33
SGMS1-210ENST00000619438 SPINK6Q6UWN8 80 aa12.97□□□□□ -0.33
SGMS1-210ENST00000619438 DSCR10P59022 87 aa12.93□□□□□ -0.34
SGMS1-210ENST00000619438 A0A0G2JQZ4 141 aa12.93□□□□□ -0.34
SGMS1-210ENST00000619438 LINC00483Q53H64 154 aa12.92□□□□□ -0.34
SGMS1-210ENST00000619438 CYSTM1Q9H1C7 97 aa12.92□□□□□ -0.34
SGMS1-210ENST00000619438 A0A087WSZ3 146 aa12.89□□□□□ -0.35
SGMS1-210ENST00000619438 ZNF706Q9Y5V0 76 aaPredicted RBP12.89□□□□□ -0.35
SGMS1-210ENST00000619438 IGLV7-43P04211 117 aa12.89□□□□□ -0.35
SGMS1-210ENST00000619438 TMEM258P61165 79 aa12.89□□□□□ -0.35
SGMS1-210ENST00000619438 C20orf197Q8N268 126 aa12.88□□□□□ -0.35
SGMS1-210ENST00000619438 KLKP1Q107X0 134 aa12.86□□□□□ -0.35
SGMS1-210ENST00000619438 OCR1Q9BZK8 76 aa12.86□□□□□ -0.35
SGMS1-210ENST00000619438 ZNF861PO60384 105 aa12.84□□□□□ -0.35
SGMS1-210ENST00000619438 K7EQZ3 153 aa12.83□□□□□ -0.35
SGMS1-210ENST00000619438 MT1HL1P0DM35 61 aa12.8□□□□□ -0.36
SGMS1-210ENST00000619438 LINC00472Q9H8W2 130 aa12.78□□□□□ -0.36
SGMS1-210ENST00000619438 HCG22E2RYF7 251 aa12.75□□□□□ -0.37
SGMS1-210ENST00000619438 H7BZZ5 65 aa12.74□□□□□ -0.37
SGMS1-210ENST00000619438 NDUFC1O43677 76 aa12.74□□□□□ -0.37
SGMS1-210ENST00000619438 IGLV9-49A0A0B4J1Y8 123 aa12.73□□□□□ -0.37
SGMS1-210ENST00000619438 RPS28P62857 69 aaKnown RBP12.73□□□□□ -0.37
SGMS1-210ENST00000619438 TMEM254Q8TBM7 123 aa12.73□□□□□ -0.37
SGMS1-210ENST00000619438 J3KT08 172 aa12.72□□□□□ -0.37
SGMS1-210ENST00000619438 DEFB116Q30KQ4 102 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms