RNA–Protein interactions for RNA: ENST00000618375.1

SMC5-204, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 5

Gene SMC5, Length 223 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-204ENST00000618375 LAMA3Q16787 3333 aa1.94□□□□□ -2.1
SMC5-204ENST00000618375 TRIOO75962 3097 aa1.94□□□□□ -2.1
SMC5-204ENST00000618375 DMDP11532 3685 aa1.93□□□□□ -2.1
SMC5-204ENST00000618375 LAMA2P24043 3122 aaKnown RBP1.93□□□□□ -2.1
SMC5-204ENST00000618375 FREM2Q5SZK8 3169 aa1.92□□□□□ -2.1
SMC5-204ENST00000618375 PRLHP81277 87 aa1.92□□□□□ -2.1
SMC5-204ENST00000618375 LINC01556Q5JQF7 62 aa1.92□□□□□ -2.1
SMC5-204ENST00000618375 AKAP9Q99996 3911 aa1.92□□□□□ -2.1
SMC5-204ENST00000618375 PRUNE2Q8WUY3 3088 aa1.92□□□□□ -2.1
SMC5-204ENST00000618375 EP300Q09472 2414 aaPredicted RBP1.92□□□□□ -2.1
SMC5-204ENST00000618375 CNOT1A5YKK6 2376 aaKnown RBP1.91□□□□□ -2.1
SMC5-204ENST00000618375 KRTAP10-12P60413 245 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 RPL37P61927 97 aaKnown RBP1.91□□□□□ -2.1
SMC5-204ENST00000618375 C14orf177Q52M58 125 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 KRTAP5-1Q6L8H4 278 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 CRIPTQ9P021 101 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 PCNX1Q96RV3 2341 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 C5orf42Q9H799 3197 aa1.91□□□□□ -2.1
SMC5-204ENST00000618375 BOD1L1Q8NFC6 3051 aa1.9□□□□□ -2.11
SMC5-204ENST00000618375 BRCA2P51587 3418 aa1.9□□□□□ -2.11
SMC5-204ENST00000618375 COL6A6A6NMZ7 2263 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 SPENQ96T58 3664 aaKnown RBP1.89□□□□□ -2.11
SMC5-204ENST00000618375 LAMA1P25391 3075 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 CHD6Q8TD26 2715 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 KRTAP9-6A8MVA2 160 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 SPART-AS1P0CW21 52 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 KRTAP13-1Q8IUC0 172 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 ANKRD17O75179 2603 aaKnown RBP1.89□□□□□ -2.11
SMC5-204ENST00000618375 SPEGQ15772 3267 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 NOTCH3Q9UM47 2321 aa1.89□□□□□ -2.11
SMC5-204ENST00000618375 DMXL2Q8TDJ6 3036 aa1.88□□□□□ -2.11
SMC5-204ENST00000618375 AKAP13Q12802 2813 aa1.88□□□□□ -2.11
SMC5-204ENST00000618375 WDFY3Q8IZQ1 3526 aa1.88□□□□□ -2.11
SMC5-204ENST00000618375 PRO2289Q9P1D8 64 aa1.88□□□□□ -2.11
SMC5-204ENST00000618375 PTPRZ1P23471 2315 aaPredicted RBP1.88□□□□□ -2.11
SMC5-204ENST00000618375 PIEZO2Q9H5I5 2752 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 TENM2Q9NT68 2774 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 ABCA2Q9BZC7 2435 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 A0A1W2PPR1 153 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 APC2O95996 2303 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 ROS1P08922 2347 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 VCANP13611 3396 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 ACACAQ13085 2346 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 LCE1FQ5T754 118 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 DEFB124Q8NES8 71 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 TYMSOSQ8TAI1 123 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 NCOR1O75376 2440 aa1.87□□□□□ -2.11
SMC5-204ENST00000618375 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.86□□□□□ -2.11
SMC5-204ENST00000618375 RP1L1Q8IWN7 2480 aaPredicted RBP1.86□□□□□ -2.11
SMC5-204ENST00000618375 AKAP6Q13023 2319 aa1.86□□□□□ -2.11
SMC5-204ENST00000618375 DSPP15924 2871 aaKnown RBP1.86□□□□□ -2.11
SMC5-204ENST00000618375 TPRP12270 2363 aaKnown RBP1.86□□□□□ -2.11
SMC5-204ENST00000618375 TRIOBPQ9H2D6 2365 aa1.86□□□□□ -2.11
SMC5-204ENST00000618375 OTOGQ6ZRI0 2925 aa1.86□□□□□ -2.11
SMC5-204ENST00000618375 CELSR2Q9HCU4 2923 aa1.86□□□□□ -2.11
SMC5-204ENST00000618375 REV3LO60673 3130 aa1.86□□□□□ -2.11
SMC5-204ENST00000618375 ZFHX4Q86UP3 3567 aa1.85□□□□□ -2.11
SMC5-204ENST00000618375 PLAC4Q8WY50 150 aa1.85□□□□□ -2.11
SMC5-204ENST00000618375 C10orf95Q9H7T3 257 aa1.85□□□□□ -2.11
SMC5-204ENST00000618375 MAP1AP78559 2803 aaPredicted RBP1.85□□□□□ -2.11
SMC5-204ENST00000618375 IGF2RP11717 2491 aa1.84□□□□□ -2.11
SMC5-204ENST00000618375 ASH1LQ9NR48 2969 aaKnown RBP1.84□□□□□ -2.11
SMC5-204ENST00000618375 CSMD1Q96PZ7 3565 aa1.84□□□□□ -2.11
SMC5-204ENST00000618375 A0A096LNI7 61 aa1.84□□□□□ -2.11
SMC5-204ENST00000618375 SPINK1P00995 79 aa1.84□□□□□ -2.11
SMC5-204ENST00000618375 HTN3P15516 51 aa1.84□□□□□ -2.11
SMC5-204ENST00000618375 C2CD3Q4AC94 2353 aa1.84□□□□□ -2.12
SMC5-204ENST00000618375 ANKHD1Q8IWZ3 2542 aaKnown RBP1.83□□□□□ -2.12
SMC5-204ENST00000618375 CDH23Q9H251 3354 aa1.83□□□□□ -2.12
SMC5-204ENST00000618375 SMG1Q96Q15 3661 aaKnown RBP1.82□□□□□ -2.12
SMC5-204ENST00000618375 A0A1B0GVY2 172 aa1.82□□□□□ -2.12
SMC5-204ENST00000618375 KRTAP10-3P60369 221 aa1.82□□□□□ -2.12
SMC5-204ENST00000618375 DEFB135Q30KP9 77 aa1.82□□□□□ -2.12
SMC5-204ENST00000618375 Q6ZRN7 208 aaPredicted RBP1.82□□□□□ -2.12
SMC5-204ENST00000618375 CELSR1Q9NYQ6 3014 aa1.82□□□□□ -2.12
SMC5-204ENST00000618375 COL12A1Q99715 3063 aa1.82□□□□□ -2.12
SMC5-204ENST00000618375 TACC2O95359 2948 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 SPTBN4Q9H254 2564 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 INE1O15225 51 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 LCE3CQ5T5A8 94 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 KRTAP5-4Q6L8H1 288 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 DEFB123Q8N688 67 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 KRTAP4-4Q9BYR3 166 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 S4R3F8 94 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 CELSR3Q9NYQ7 3312 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 CACNA1HO95180 2353 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 NBPF19A0A087WUL8 3843 aa1.81□□□□□ -2.12
SMC5-204ENST00000618375 ITPR1Q14643 2758 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 SPINK6Q6UWN8 80 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 SPACA4Q8TDM5 124 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 LOC400499M0QZD8 3231 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 DNAH1Q9P2D7 4330 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 SPTA1P02549 2419 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 ATMQ13315 3056 aa1.8□□□□□ -2.12
SMC5-204ENST00000618375 DEFB4AO15263 64 aa1.79□□□□□ -2.12
SMC5-204ENST00000618375 DMXL1Q9Y485 3027 aa1.78□□□□□ -2.12
SMC5-204ENST00000618375 ZDBF2Q9HCK1 2354 aa1.78□□□□□ -2.12
SMC5-204ENST00000618375 MAPK1IP1LQ8NDC0 245 aa1.78□□□□□ -2.12
SMC5-204ENST00000618375 DCHS2Q6V1P9 2916 aa1.78□□□□□ -2.12
SMC5-204ENST00000618375 NBASA2RRP1 2371 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.8 ms