RNA–Protein interactions for RNA: ENST00000617641.4

PCDHGC3-205, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGC3, Length 2,346 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-205ENST00000617641 Q6ZVQ6 151 aa10.76□□□□□ -0.69
PCDHGC3-205ENST00000617641 SMIM29Q86T20 159 aa10.76□□□□□ -0.69
PCDHGC3-205ENST00000617641 UBE2AP49459 152 aa10.75□□□□□ -0.69
PCDHGC3-205ENST00000617641 TMEM258P61165 79 aa10.75□□□□□ -0.69
PCDHGC3-205ENST00000617641 FRAS1Q86XX4 4008 aa10.75□□□□□ -0.69
PCDHGC3-205ENST00000617641 H0Y9J4 135 aa10.75□□□□□ -0.69
PCDHGC3-205ENST00000617641 C3orf84H3BNL1 204 aa10.74□□□□□ -0.69
PCDHGC3-205ENST00000617641 OXTP01178 125 aa10.74□□□□□ -0.69
PCDHGC3-205ENST00000617641 BCE1O60756 84 aa10.74□□□□□ -0.69
PCDHGC3-205ENST00000617641 ATP5EP2Q5VTU8 51 aa10.74□□□□□ -0.69
PCDHGC3-205ENST00000617641 C1orf137Q5JT78 98 aa10.73□□□□□ -0.69
PCDHGC3-205ENST00000617641 HYDINQ4G0P3 5121 aa10.72□□□□□ -0.69
PCDHGC3-205ENST00000617641 A0A087WVE0 104 aa10.72□□□□□ -0.69
PCDHGC3-205ENST00000617641 HAMPP81172 84 aa10.72□□□□□ -0.69
PCDHGC3-205ENST00000617641 HIST1H4AP62805 103 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 SRRM2Q9UQ35 2752 aaKnown RBP10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 A0A1W2PNM2 257 aa10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 KRTAP13-1Q8IUC0 172 aa10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 PLAC8Q9NZF1 115 aa10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 V9GYY9 64 aa10.7□□□□□ -0.7
PCDHGC3-205ENST00000617641 F8WEM9 126 aa10.69□□□□□ -0.7
PCDHGC3-205ENST00000617641 DNAH8Q96JB1 4490 aa10.68□□□□□ -0.7
PCDHGC3-205ENST00000617641 DNAH11Q96DT5 4516 aa10.68□□□□□ -0.7
PCDHGC3-205ENST00000617641 KRTAP10-2P60368 255 aa10.68□□□□□ -0.7
PCDHGC3-205ENST00000617641 A0A0G2JQZ4 141 aa10.66□□□□□ -0.7
PCDHGC3-205ENST00000617641 LINC00336Q6ZUF6 198 aa10.66□□□□□ -0.7
PCDHGC3-205ENST00000617641 SCXQ7RTU7 201 aa10.66□□□□□ -0.7
PCDHGC3-205ENST00000617641 Q8NBF4 154 aa10.66□□□□□ -0.7
PCDHGC3-205ENST00000617641 CYSTM1Q9H1C7 97 aa10.66□□□□□ -0.7
PCDHGC3-205ENST00000617641 ATOX1O00244 68 aa10.64□□□□□ -0.71
PCDHGC3-205ENST00000617641 PSORS1C2Q9UIG4 136 aa10.64□□□□□ -0.71
PCDHGC3-205ENST00000617641 DNAH5Q8TE73 4624 aa10.63□□□□□ -0.71
PCDHGC3-205ENST00000617641 SPRR1BP22528 89 aa10.63□□□□□ -0.71
PCDHGC3-205ENST00000617641 NREPQ16612 68 aa10.63□□□□□ -0.71
PCDHGC3-205ENST00000617641 IGFL1Q6UW32 110 aa10.63□□□□□ -0.71
PCDHGC3-205ENST00000617641 CXCL6P80162 114 aa10.63□□□□□ -0.71
PCDHGC3-205ENST00000617641 FAT2Q9NYQ8 4349 aa10.62□□□□□ -0.71
PCDHGC3-205ENST00000617641 IGLV8-61A0A075B6I0 122 aa10.62□□□□□ -0.71
PCDHGC3-205ENST00000617641 SPRR4Q96PI1 79 aa10.61□□□□□ -0.71
PCDHGC3-205ENST00000617641 FAM30AQ9NZY2 134 aa10.6□□□□□ -0.71
PCDHGC3-205ENST00000617641 A0A1B0GW54 56 aa10.59□□□□□ -0.71
PCDHGC3-205ENST00000617641 PKD1P98161 4303 aa10.59□□□□□ -0.71
PCDHGC3-205ENST00000617641 FAM236DA0A1B0GTK5 79 aa10.56□□□□□ -0.72
PCDHGC3-205ENST00000617641 FAM236CP0DP71 79 aa10.56□□□□□ -0.72
PCDHGC3-205ENST00000617641 C1orf195Q5TG92 126 aa10.55□□□□□ -0.72
PCDHGC3-205ENST00000617641 CIRBP-AS1Q8TBR5 109 aa10.55□□□□□ -0.72
PCDHGC3-205ENST00000617641 BPY2O14599 106 aa10.54□□□□□ -0.72
PCDHGC3-205ENST00000617641 Q8N9L7 120 aa10.54□□□□□ -0.72
PCDHGC3-205ENST00000617641 SACSQ9NZJ4 4579 aa10.54□□□□□ -0.72
PCDHGC3-205ENST00000617641 KRTAP10-1P60331 282 aa10.53□□□□□ -0.72
PCDHGC3-205ENST00000617641 SERP2Q8N6R1 65 aa10.53□□□□□ -0.72
PCDHGC3-205ENST00000617641 ZNF861PO60384 105 aa10.53□□□□□ -0.72
PCDHGC3-205ENST00000617641 A0A087WSZ3 146 aa10.5□□□□□ -0.73
PCDHGC3-205ENST00000617641 LINC00483Q53H64 154 aa10.5□□□□□ -0.73
PCDHGC3-205ENST00000617641 Q6ZSA8 131 aa10.5□□□□□ -0.73
PCDHGC3-205ENST00000617641 IGLV9-49A0A0B4J1Y8 123 aa10.49□□□□□ -0.73
PCDHGC3-205ENST00000617641 IGKV4-1P06312 121 aa10.49□□□□□ -0.73
PCDHGC3-205ENST00000617641 ZNF706Q9Y5V0 76 aaPredicted RBP10.49□□□□□ -0.73
PCDHGC3-205ENST00000617641 IGLV7-43P04211 117 aa10.48□□□□□ -0.73
PCDHGC3-205ENST00000617641 ANAPC11Q9NYG5 84 aa10.47□□□□□ -0.73
PCDHGC3-205ENST00000617641 LCE6AA0A183 80 aa10.44□□□□□ -0.74
PCDHGC3-205ENST00000617641 SERP1Q9Y6X1 66 aa10.43□□□□□ -0.74
PCDHGC3-205ENST00000617641 DSCR10P59022 87 aa10.42□□□□□ -0.74
PCDHGC3-205ENST00000617641 DEFB116Q30KQ4 102 aa10.42□□□□□ -0.74
PCDHGC3-205ENST00000617641 A0A0U1RQV1 116 aa10.41□□□□□ -0.74
PCDHGC3-205ENST00000617641 MOBPQ13875 183 aa10.4□□□□□ -0.74
PCDHGC3-205ENST00000617641 LRP1BQ9NZR2 4599 aa10.4□□□□□ -0.75
PCDHGC3-205ENST00000617641 K7EQZ3 153 aa10.39□□□□□ -0.75
PCDHGC3-205ENST00000617641 BRK1Q8WUW1 75 aa10.38□□□□□ -0.75
PCDHGC3-205ENST00000617641 PKHD1P08F94 4074 aa10.38□□□□□ -0.75
PCDHGC3-205ENST00000617641 SMIM26A0A096LP01 95 aa10.36□□□□□ -0.75
PCDHGC3-205ENST00000617641 RPL37AP61513 92 aaKnown RBP10.35□□□□□ -0.75
PCDHGC3-205ENST00000617641 TRAV7A0A075B6U4 112 aa10.34□□□□□ -0.75
PCDHGC3-205ENST00000617641 FP248Q71RG6 208 aaPredicted RBP10.34□□□□□ -0.75
PCDHGC3-205ENST00000617641 LINC00472Q9H8W2 130 aa10.33□□□□□ -0.76
PCDHGC3-205ENST00000617641 VPS13BQ7Z7G8 4022 aa10.29□□□□□ -0.76
PCDHGC3-205ENST00000617641 RYR2Q92736 4967 aa10.28□□□□□ -0.76
PCDHGC3-205ENST00000617641 A0A1B0GVY2 172 aa10.26□□□□□ -0.77
PCDHGC3-205ENST00000617641 C20orf197Q8N268 126 aa10.26□□□□□ -0.77
PCDHGC3-205ENST00000617641 PMAIP1Q13794 54 aa10.25□□□□□ -0.77
PCDHGC3-205ENST00000617641 HCG22E2RYF7 251 aa10.25□□□□□ -0.77
PCDHGC3-205ENST00000617641 Q96NJ1 140 aa10.25□□□□□ -0.77
PCDHGC3-205ENST00000617641 OCR1Q9BZK8 76 aa10.25□□□□□ -0.77
PCDHGC3-205ENST00000617641 H7BZZ5 65 aa10.24□□□□□ -0.77
PCDHGC3-205ENST00000617641 A8MWP4 228 aa10.24□□□□□ -0.77
PCDHGC3-205ENST00000617641 DYNC1H1Q14204 4646 aaKnown RBP10.23□□□□□ -0.77
PCDHGC3-205ENST00000617641 PRR15Q8IV56 129 aa10.23□□□□□ -0.77
PCDHGC3-205ENST00000617641 A0A087X002 238 aa10.22□□□□□ -0.77
PCDHGC3-205ENST00000617641 KMT2CQ8NEZ4 4911 aaKnown RBP10.22□□□□□ -0.77
PCDHGC3-205ENST00000617641 WFDC13Q8IUB5 93 aa10.21□□□□□ -0.77
PCDHGC3-205ENST00000617641 KRTAP13-2Q52LG2 175 aa10.19□□□□□ -0.78
PCDHGC3-205ENST00000617641 SSBP3-AS1Q7Z2R9 100 aa10.19□□□□□ -0.78
PCDHGC3-205ENST00000617641 SNURFQ9Y675 71 aa10.18□□□□□ -0.78
PCDHGC3-205ENST00000617641 CD164Q04900 197 aa10.18□□□□□ -0.78
PCDHGC3-205ENST00000617641 KRTAP1-4P0C5Y4 121 aa10.17□□□□□ -0.78
PCDHGC3-205ENST00000617641 FAM229BQ4G0N7 80 aa10.16□□□□□ -0.78
PCDHGC3-205ENST00000617641 KRTAP29-1A8MX34 341 aaPredicted RBP10.15□□□□□ -0.78
PCDHGC3-205ENST00000617641 SMR3BP02814 79 aaPredicted RBP10.15□□□□□ -0.78
PCDHGC3-205ENST00000617641 KLKP1Q107X0 134 aa10.15□□□□□ -0.79
PCDHGC3-205ENST00000617641 NDUFB1O75438 58 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms