RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 PRR26Q8N8Z3 221 aa11.65□□□□□ -0.54
AC008878.3-201ENST00000617428 FAM104AQ969W3 186 aa11.65□□□□□ -0.55
AC008878.3-201ENST00000617428 UQCR11O14957 56 aa11.64□□□□□ -0.55
AC008878.3-201ENST00000617428 STAB2Q8WWQ8 2551 aa11.64□□□□□ -0.55
AC008878.3-201ENST00000617428 REV3LO60673 3130 aa11.62□□□□□ -0.55
AC008878.3-201ENST00000617428 Q8N1X5 172 aa11.6□□□□□ -0.55
AC008878.3-201ENST00000617428 TACC2O95359 2948 aa11.57□□□□□ -0.56
AC008878.3-201ENST00000617428 FLNCQ14315 2725 aa11.56□□□□□ -0.56
AC008878.3-201ENST00000617428 DMBT1Q9UGM3 2413 aaPredicted RBP11.56□□□□□ -0.56
AC008878.3-201ENST00000617428 IGLV7-46A0A075B6I9 117 aa11.55□□□□□ -0.56
AC008878.3-201ENST00000617428 ITPR1Q14643 2758 aa11.55□□□□□ -0.56
AC008878.3-201ENST00000617428 H7BZZ5 65 aa11.53□□□□□ -0.56
AC008878.3-201ENST00000617428 LINC01554Q52M75 96 aa11.53□□□□□ -0.56
AC008878.3-201ENST00000617428 CYP4F30PQ9H0H9 118 aa11.53□□□□□ -0.56
AC008878.3-201ENST00000617428 CD164Q04900 197 aa11.52□□□□□ -0.57
AC008878.3-201ENST00000617428 Q6ZSA8 131 aa11.51□□□□□ -0.57
AC008878.3-201ENST00000617428 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
AC008878.3-201ENST00000617428 SZT2Q5T011 3432 aa11.5□□□□□ -0.57
AC008878.3-201ENST00000617428 MIR22HGQ0VDD5 57 aa11.5□□□□□ -0.57
AC008878.3-201ENST00000617428 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
AC008878.3-201ENST00000617428 ITPR2Q14571 2701 aa11.47□□□□□ -0.57
AC008878.3-201ENST00000617428 Q8NDZ9 215 aa11.46□□□□□ -0.57
AC008878.3-201ENST00000617428 FAM229BQ4G0N7 80 aa11.45□□□□□ -0.58
AC008878.3-201ENST00000617428 A0A0D9SG42 100 aa11.42□□□□□ -0.58
AC008878.3-201ENST00000617428 SPINT4Q6UDR6 99 aa11.42□□□□□ -0.58
AC008878.3-201ENST00000617428 DMXL2Q8TDJ6 3036 aa11.41□□□□□ -0.58
AC008878.3-201ENST00000617428 FREM2Q5SZK8 3169 aa11.41□□□□□ -0.58
AC008878.3-201ENST00000617428 CRIPTQ9P021 101 aa11.4□□□□□ -0.59
AC008878.3-201ENST00000617428 ATMQ13315 3056 aa11.4□□□□□ -0.59
AC008878.3-201ENST00000617428 LAMA1P25391 3075 aa11.4□□□□□ -0.59
AC008878.3-201ENST00000617428 SPRR1AP35321 89 aa11.39□□□□□ -0.59
AC008878.3-201ENST00000617428 SPANXA2-OT1Q8N9U9 137 aa11.39□□□□□ -0.59
AC008878.3-201ENST00000617428 FRYLO94915 3013 aa11.39□□□□□ -0.59
AC008878.3-201ENST00000617428 COL12A1Q99715 3063 aa11.37□□□□□ -0.59
AC008878.3-201ENST00000617428 OCR1Q9BZK8 76 aa11.37□□□□□ -0.59
AC008878.3-201ENST00000617428 LCE6AA0A183 80 aa11.32□□□□□ -0.6
AC008878.3-201ENST00000617428 M0R2T5 61 aa11.32□□□□□ -0.6
AC008878.3-201ENST00000617428 CELSR3Q9NYQ7 3312 aa11.31□□□□□ -0.6
AC008878.3-201ENST00000617428 HIVEP1P15822 2718 aa11.31□□□□□ -0.6
AC008878.3-201ENST00000617428 TENM4Q6N022 2769 aa11.3□□□□□ -0.6
AC008878.3-201ENST00000617428 VCANP13611 3396 aa11.29□□□□□ -0.6
AC008878.3-201ENST00000617428 KRTAP10-1P60331 282 aa11.29□□□□□ -0.6
AC008878.3-201ENST00000617428 KRTAP10-2P60368 255 aa11.29□□□□□ -0.6
AC008878.3-201ENST00000617428 KRTAP26-1Q6PEX3 210 aa11.28□□□□□ -0.6
AC008878.3-201ENST00000617428 HRES1P13985 223 aa11.28□□□□□ -0.6
AC008878.3-201ENST00000617428 Q5VSD8 79 aa11.26□□□□□ -0.61
AC008878.3-201ENST00000617428 MMP24-AS1A0A0U1RRL7 71 aa11.25□□□□□ -0.61
AC008878.3-201ENST00000617428 SPRR1BP22528 89 aa11.25□□□□□ -0.61
AC008878.3-201ENST00000617428 BOD1L1Q8NFC6 3051 aa11.25□□□□□ -0.61
AC008878.3-201ENST00000617428 COL6A3P12111 3177 aa11.24□□□□□ -0.61
AC008878.3-201ENST00000617428 ZCCHC13Q8WW36 166 aaKnown RBP11.23□□□□□ -0.61
AC008878.3-201ENST00000617428 KMT2BQ9UMN6 2715 aaPredicted RBP11.23□□□□□ -0.61
AC008878.3-201ENST00000617428 Q8N9P0 234 aaPredicted RBP11.22□□□□□ -0.61
AC008878.3-201ENST00000617428 UTP20O75691 2785 aaKnown RBP11.21□□□□□ -0.61
AC008878.3-201ENST00000617428 KALRNO60229 2985 aa11.21□□□□□ -0.61
AC008878.3-201ENST00000617428 CDC42SE1Q9NRR8 79 aa11.18□□□□□ -0.62
AC008878.3-201ENST00000617428 LINC00472Q9H8W2 130 aa11.18□□□□□ -0.62
AC008878.3-201ENST00000617428 ASH1LQ9NR48 2969 aaKnown RBP11.17□□□□□ -0.62
AC008878.3-201ENST00000617428 DNAH14Q0VDD8 3507 aa11.16□□□□□ -0.62
AC008878.3-201ENST00000617428 CAMK2N1Q7Z7J9 78 aa11.15□□□□□ -0.63
AC008878.3-201ENST00000617428 ADGRG4Q8IZF6 3080 aa11.14□□□□□ -0.63
AC008878.3-201ENST00000617428 PANO1I0J062 215 aa11.13□□□□□ -0.63
AC008878.3-201ENST00000617428 SPINK7P58062 85 aa11.12□□□□□ -0.63
AC008878.3-201ENST00000617428 CSAG1Q6PB30 78 aa11.12□□□□□ -0.63
AC008878.3-201ENST00000617428 A0A1B0GU33 70 aa11.11□□□□□ -0.63
AC008878.3-201ENST00000617428 Q6ZR54 194 aa11.09□□□□□ -0.63
AC008878.3-201ENST00000617428 Q5W150 140 aa11.08□□□□□ -0.64
AC008878.3-201ENST00000617428 CRYBG3Q68DQ2 2970 aa11.08□□□□□ -0.64
AC008878.3-201ENST00000617428 NBEAQ8NFP9 2946 aa11.08□□□□□ -0.64
AC008878.3-201ENST00000617428 SEC61BP60468 96 aaKnown RBP11.07□□□□□ -0.64
AC008878.3-201ENST00000617428 NIPBLQ6KC79 2804 aaeCLIP11.06□□□□□ -0.64
AC008878.3-201ENST00000617428 CELSR2Q9HCU4 2923 aa11.06□□□□□ -0.64
AC008878.3-201ENST00000617428 ZZEF1O43149 2961 aa11.05□□□□□ -0.64
AC008878.3-201ENST00000617428 S4R3F8 94 aa11.01□□□□□ -0.65
AC008878.3-201ENST00000617428 EYSQ5T1H1 3165 aa10.99□□□□□ -0.65
AC008878.3-201ENST00000617428 Q1T7F1 81 aa10.98□□□□□ -0.65
AC008878.3-201ENST00000617428 LRBAP50851 2863 aa10.98□□□□□ -0.65
AC008878.3-201ENST00000617428 TNRC18O15417 2968 aaPredicted RBP10.97□□□□□ -0.65
AC008878.3-201ENST00000617428 KTN1-AS1Q86SY8 53 aa10.96□□□□□ -0.66
AC008878.3-201ENST00000617428 LINC00483Q53H64 154 aa10.95□□□□□ -0.66
AC008878.3-201ENST00000617428 KRTAP4-16G5E9R7 235 aaPredicted RBP10.95□□□□□ -0.66
AC008878.3-201ENST00000617428 APCP25054 2843 aa10.94□□□□□ -0.66
AC008878.3-201ENST00000617428 SPEGQ15772 3267 aa10.94□□□□□ -0.66
AC008878.3-201ENST00000617428 A0A087X002 238 aa10.93□□□□□ -0.66
AC008878.3-201ENST00000617428 R4GN34 69 aa10.9□□□□□ -0.66
AC008878.3-201ENST00000617428 LCA10Q71F78 164 aa10.9□□□□□ -0.66
AC008878.3-201ENST00000617428 DCHS2Q6V1P9 2916 aa10.89□□□□□ -0.67
AC008878.3-201ENST00000617428 LINC01558Q9Y6Z2 57 aa10.87□□□□□ -0.67
AC008878.3-201ENST00000617428 CYSTM1Q9H1C7 97 aa10.87□□□□□ -0.67
AC008878.3-201ENST00000617428 CFAP47Q6ZTR5 3102 aa10.87□□□□□ -0.67
AC008878.3-201ENST00000617428 ZANQ9Y493 2812 aa10.87□□□□□ -0.67
AC008878.3-201ENST00000617428 DMAC1Q96GE9 116 aa10.85□□□□□ -0.67
AC008878.3-201ENST00000617428 FP248Q71RG6 208 aaPredicted RBP10.84□□□□□ -0.67
AC008878.3-201ENST00000617428 Q75L30 129 aa10.84□□□□□ -0.67
AC008878.3-201ENST00000617428 Q6ZRN7 208 aaPredicted RBP10.83□□□□□ -0.68
AC008878.3-201ENST00000617428 KRTAP11-1Q8IUC1 163 aa10.8□□□□□ -0.68
AC008878.3-201ENST00000617428 DMXL1Q9Y485 3027 aa10.79□□□□□ -0.68
AC008878.3-201ENST00000617428 SPTBN5Q9NRC6 3674 aaKnown RBP10.79□□□□□ -0.68
AC008878.3-201ENST00000617428 TENM3Q9P273 2699 aa10.78□□□□□ -0.68
AC008878.3-201ENST00000617428 LUZP6Q538Z0 58 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms