RNA–Protein interactions for RNA: ENST00000617039.4

TNFRSF11A-206, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-206ENST00000617039 TMEM254Q8TBM7 123 aa9.39□□□□□ -0.91
TNFRSF11A-206ENST00000617039 TNP2Q05952 138 aa9.39□□□□□ -0.91
TNFRSF11A-206ENST00000617039 LINC00474Q9P2X8 69 aa9.39□□□□□ -0.91
TNFRSF11A-206ENST00000617039 TRAV7A0A075B6U4 112 aa9.38□□□□□ -0.91
TNFRSF11A-206ENST00000617039 A0A087WTM6 91 aa9.38□□□□□ -0.91
TNFRSF11A-206ENST00000617039 C9orf163Q8N9P6 203 aa9.37□□□□□ -0.91
TNFRSF11A-206ENST00000617039 LOC110117498A0A087WWA1 95 aa9.36□□□□□ -0.91
TNFRSF11A-206ENST00000617039 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
TNFRSF11A-206ENST00000617039 CASC2Q6XLA1 102 aa9.36□□□□□ -0.91
TNFRSF11A-206ENST00000617039 SVIPQ8NHG7 77 aa9.35□□□□□ -0.91
TNFRSF11A-206ENST00000617039 SPACA4Q8TDM5 124 aa9.34□□□□□ -0.91
TNFRSF11A-206ENST00000617039 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
TNFRSF11A-206ENST00000617039 A0A0U1RQV1 116 aa9.32□□□□□ -0.92
TNFRSF11A-206ENST00000617039 KRTAP11-1Q8IUC1 163 aa9.32□□□□□ -0.92
TNFRSF11A-206ENST00000617039 BRK1Q8WUW1 75 aa9.31□□□□□ -0.92
TNFRSF11A-206ENST00000617039 HCG22E2RYF7 251 aa9.3□□□□□ -0.92
TNFRSF11A-206ENST00000617039 CXCL6P80162 114 aa9.3□□□□□ -0.92
TNFRSF11A-206ENST00000617039 TMEM258P61165 79 aa9.29□□□□□ -0.92
TNFRSF11A-206ENST00000617039 TRBV7-6A0A0J9YX20 115 aa9.29□□□□□ -0.92
TNFRSF11A-206ENST00000617039 BCE1O60756 84 aa9.27□□□□□ -0.93
TNFRSF11A-206ENST00000617039 F8WDY8 70 aa9.27□□□□□ -0.93
TNFRSF11A-206ENST00000617039 KRTAP7-1Q8IUC3 87 aa9.27□□□□□ -0.93
TNFRSF11A-206ENST00000617039 PKIGQ9Y2B9 76 aa9.27□□□□□ -0.93
TNFRSF11A-206ENST00000617039 PSPHP1O15172 72 aa9.26□□□□□ -0.93
TNFRSF11A-206ENST00000617039 C4orf26Q17RF5 130 aa9.25□□□□□ -0.93
TNFRSF11A-206ENST00000617039 TLX1NBP0CAT3 122 aa9.25□□□□□ -0.93
TNFRSF11A-206ENST00000617039 CRYGAP11844 174 aa9.25□□□□□ -0.93
TNFRSF11A-206ENST00000617039 H0Y9P7 68 aa9.24□□□□□ -0.93
TNFRSF11A-206ENST00000617039 LINC01600Q96MT4 127 aa9.23□□□□□ -0.93
TNFRSF11A-206ENST00000617039 WWC2-AS2Q96NR7 200 aa9.21□□□□□ -0.94
TNFRSF11A-206ENST00000617039 MEGF8Q7Z7M0 2845 aa9.2□□□□□ -0.94
TNFRSF11A-206ENST00000617039 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
TNFRSF11A-206ENST00000617039 ZNF706Q9Y5V0 76 aaPredicted RBP9.2□□□□□ -0.94
TNFRSF11A-206ENST00000617039 SPINK1P00995 79 aa9.18□□□□□ -0.94
TNFRSF11A-206ENST00000617039 C1orf64Q8NEQ6 169 aa9.18□□□□□ -0.94
TNFRSF11A-206ENST00000617039 KRTAP10-2P60368 255 aa9.17□□□□□ -0.94
TNFRSF11A-206ENST00000617039 hDV103S1A0JD37 113 aa9.17□□□□□ -0.94
TNFRSF11A-206ENST00000617039 CHKB-CPT1BH3BT56 60 aa9.17□□□□□ -0.94
TNFRSF11A-206ENST00000617039 IGLV5-48A0A075B6I7 105 aa9.16□□□□□ -0.94
TNFRSF11A-206ENST00000617039 SPTSSBQ8NFR3 76 aa9.16□□□□□ -0.94
TNFRSF11A-206ENST00000617039 IGKV2D-30A0A075B6S6 120 aa9.15□□□□□ -0.94
TNFRSF11A-206ENST00000617039 IGKV2-30P06310 120 aa9.15□□□□□ -0.94
TNFRSF11A-206ENST00000617039 DSCR10P59022 87 aa9.15□□□□□ -0.94
TNFRSF11A-206ENST00000617039 PLA2G1BP04054 148 aaKnown RBP9.15□□□□□ -0.95
TNFRSF11A-206ENST00000617039 ZNF861PO60384 105 aa9.13□□□□□ -0.95
TNFRSF11A-206ENST00000617039 H7BZZ5 65 aa9.12□□□□□ -0.95
TNFRSF11A-206ENST00000617039 PLA2G2DQ9UNK4 145 aa9.12□□□□□ -0.95
TNFRSF11A-206ENST00000617039 SPRR4Q96PI1 79 aa9.1□□□□□ -0.95
TNFRSF11A-206ENST00000617039 SPRR1AP35321 89 aa9.09□□□□□ -0.95
TNFRSF11A-206ENST00000617039 PRR15Q8IV56 129 aa9.08□□□□□ -0.96
TNFRSF11A-206ENST00000617039 OXTP01178 125 aa9.08□□□□□ -0.96
TNFRSF11A-206ENST00000617039 KRTAP4-16G5E9R7 235 aaPredicted RBP9.06□□□□□ -0.96
TNFRSF11A-206ENST00000617039 NDUFC1O43677 76 aa9.06□□□□□ -0.96
TNFRSF11A-206ENST00000617039 TYMSOSQ8TAI1 123 aa9.06□□□□□ -0.96
TNFRSF11A-206ENST00000617039 IGLV7-43P04211 117 aa9.05□□□□□ -0.96
TNFRSF11A-206ENST00000617039 IGLV5-37A0A075B6J1 123 aa9.05□□□□□ -0.96
TNFRSF11A-206ENST00000617039 SERP1Q9Y6X1 66 aa9.05□□□□□ -0.96
TNFRSF11A-206ENST00000617039 C9orf92A6NGG3 77 aa9.04□□□□□ -0.96
TNFRSF11A-206ENST00000617039 A8MWP4 228 aa9.04□□□□□ -0.96
TNFRSF11A-206ENST00000617039 ANK2Q01484 3957 aa9.02□□□□□ -0.97
TNFRSF11A-206ENST00000617039 SMIM26A0A096LP01 95 aa9.01□□□□□ -0.97
TNFRSF11A-206ENST00000617039 SPAG11AQ6PDA7 123 aa9.01□□□□□ -0.97
TNFRSF11A-206ENST00000617039 TRAV22A0A0B4J277 110 aa9.01□□□□□ -0.97
TNFRSF11A-206ENST00000617039 KRTAP10-1P60331 282 aa9□□□□□ -0.97
TNFRSF11A-206ENST00000617039 PRR15LQ9BU68 103 aa9□□□□□ -0.97
TNFRSF11A-206ENST00000617039 OCR1Q9BZK8 76 aa9□□□□□ -0.97
TNFRSF11A-206ENST00000617039 IGLV8-61A0A075B6I0 122 aa8.98□□□□□ -0.97
TNFRSF11A-206ENST00000617039 KLKP1Q107X0 134 aa8.97□□□□□ -0.97
TNFRSF11A-206ENST00000617039 PRR26Q8N8Z3 221 aa8.97□□□□□ -0.97
TNFRSF11A-206ENST00000617039 Q96NJ1 140 aa8.97□□□□□ -0.97
TNFRSF11A-206ENST00000617039 A6NED7 52 aa8.96□□□□□ -0.97
TNFRSF11A-206ENST00000617039 C8orf17Q9NRJ1 99 aa8.96□□□□□ -0.97
TNFRSF11A-206ENST00000617039 Q6ZRN7 208 aaPredicted RBP8.96□□□□□ -0.98
TNFRSF11A-206ENST00000617039 LINC00313P59037 77 aa8.95□□□□□ -0.98
TNFRSF11A-206ENST00000617039 A0A087X002 238 aa8.94□□□□□ -0.98
TNFRSF11A-206ENST00000617039 NOTCH2NLQ7Z3S9 236 aa8.94□□□□□ -0.98
TNFRSF11A-206ENST00000617039 FAM229BQ4G0N7 80 aa8.93□□□□□ -0.98
TNFRSF11A-206ENST00000617039 MRPL34Q9BQ48 92 aaKnown RBP8.91□□□□□ -0.98
TNFRSF11A-206ENST00000617039 RPS28P62857 69 aaKnown RBP8.91□□□□□ -0.98
TNFRSF11A-206ENST00000617039 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
TNFRSF11A-206ENST00000617039 A8MUN3 132 aa8.9□□□□□ -0.98
TNFRSF11A-206ENST00000617039 LINC00336Q6ZUF6 198 aa8.88□□□□□ -0.99
TNFRSF11A-206ENST00000617039 DNHD1Q96M86 4753 aa8.88□□□□□ -0.99
TNFRSF11A-206ENST00000617039 Q6ZR54 194 aa8.87□□□□□ -0.99
TNFRSF11A-206ENST00000617039 DNAH10Q8IVF4 4471 aa8.86□□□□□ -0.99
TNFRSF11A-206ENST00000617039 Q5XG85 94 aa8.85□□□□□ -0.99
TNFRSF11A-206ENST00000617039 PLAC8Q9NZF1 115 aa8.85□□□□□ -0.99
TNFRSF11A-206ENST00000617039 LINC00472Q9H8W2 130 aa8.84□□□□□ -0.99
TNFRSF11A-206ENST00000617039 LYSTQ99698 3801 aa8.84□□□□□ -0.99
TNFRSF11A-206ENST00000617039 A0A1B0GW54 56 aa8.83□□□□□ -1
TNFRSF11A-206ENST00000617039 HUWE1Q7Z6Z7 4374 aaKnown RBP8.83□□□□□ -1
TNFRSF11A-206ENST00000617039 ATP5EP56381 51 aaPredicted RBP8.83□□□□□ -1
TNFRSF11A-206ENST00000617039 Q8N1X5 172 aa8.81□□□□□ -1
TNFRSF11A-206ENST00000617039 Q8N9P0 234 aaPredicted RBP8.81□□□□□ -1
TNFRSF11A-206ENST00000617039 MMP24-AS1A0A0U1RRL7 71 aa8.81□□□□□ -1
TNFRSF11A-206ENST00000617039 C7orf65Q6ZTY9 151 aa8.79□□□□□ -1
TNFRSF11A-206ENST00000617039 COA5Q86WW8 74 aa8.78□□□□□ -1
TNFRSF11A-206ENST00000617039 LINC00304Q8N9R0 145 aa8.78□□□□□ -1
TNFRSF11A-206ENST00000617039 LIMD2Q9BT23 127 aa8.77□□□□□ -1
TNFRSF11A-206ENST00000617039 FP248Q71RG6 208 aaPredicted RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 100.4 ms