RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 ALMS1Q8TCU4 4167 aa10□□□□□ -0.81
NOP56-220ENST00000616692 ODF3L2Q3SX64 289 aa10□□□□□ -0.81
NOP56-220ENST00000616692 LYSTQ99698 3801 aa10□□□□□ -0.81
NOP56-220ENST00000616692 TENM2Q9NT68 2774 aa9.99□□□□□ -0.81
NOP56-220ENST00000616692 Q6ZSN1 163 aa9.99□□□□□ -0.81
NOP56-220ENST00000616692 EPPK1P58107 5090 aaKnown RBP9.97□□□□□ -0.81
NOP56-220ENST00000616692 SPAG11AQ6PDA7 123 aa9.96□□□□□ -0.81
NOP56-220ENST00000616692 Q6ZR54 194 aa9.96□□□□□ -0.82
NOP56-220ENST00000616692 IGHV3-11P01762 117 aa9.95□□□□□ -0.82
NOP56-220ENST00000616692 KLK9Q2XQG4 91 aa9.95□□□□□ -0.82
NOP56-220ENST00000616692 A8MTW9 85 aa9.95□□□□□ -0.82
NOP56-220ENST00000616692 ROMO1P60602 79 aa9.95□□□□□ -0.82
NOP56-220ENST00000616692 MAP6D1Q9H9H5 199 aa9.94□□□□□ -0.82
NOP56-220ENST00000616692 CHCHD10Q8WYQ3 142 aaPredicted RBP9.93□□□□□ -0.82
NOP56-220ENST00000616692 STARD9Q9P2P6 4700 aa9.91□□□□□ -0.82
NOP56-220ENST00000616692 IGKV3-7A0A075B6H7 116 aa9.9□□□□□ -0.82
NOP56-220ENST00000616692 LINC00959A0A1B0GUT2 108 aa9.9□□□□□ -0.82
NOP56-220ENST00000616692 PLECQ15149 4684 aaKnown RBP9.9□□□□□ -0.83
NOP56-220ENST00000616692 TRGV4A0A0C4DH28 118 aa9.89□□□□□ -0.83
NOP56-220ENST00000616692 NUPR2A6NF83 97 aa9.89□□□□□ -0.83
NOP56-220ENST00000616692 H3BPC8 53 aa9.89□□□□□ -0.83
NOP56-220ENST00000616692 H0Y9P7 68 aa9.87□□□□□ -0.83
NOP56-220ENST00000616692 C9orf163Q8N9P6 203 aa9.87□□□□□ -0.83
NOP56-220ENST00000616692 NOTCH2NLQ7Z3S9 236 aa9.86□□□□□ -0.83
NOP56-220ENST00000616692 CSMD3Q7Z407 3707 aa9.85□□□□□ -0.83
NOP56-220ENST00000616692 IGKV3-20P01619 116 aa9.84□□□□□ -0.83
NOP56-220ENST00000616692 SPINK13Q1W4C9 94 aa9.84□□□□□ -0.83
NOP56-220ENST00000616692 IGLV7-46A0A075B6I9 117 aa9.81□□□□□ -0.84
NOP56-220ENST00000616692 K7EQZ3 153 aa9.81□□□□□ -0.84
NOP56-220ENST00000616692 DSCR10P59022 87 aa9.81□□□□□ -0.84
NOP56-220ENST00000616692 Q8NDZ9 215 aa9.81□□□□□ -0.84
NOP56-220ENST00000616692 A0A1B0GW54 56 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 IGLV6-57P01721 117 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 CMC4P56277 68 aaPredicted RBP9.79□□□□□ -0.84
NOP56-220ENST00000616692 COX17Q14061 63 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 KRTAP17-1Q9BYP8 105 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 RHPN1-AS1Q9BWJ2 59 aa9.79□□□□□ -0.84
NOP56-220ENST00000616692 LY6G6CO95867 125 aa9.78□□□□□ -0.84
NOP56-220ENST00000616692 HTN1P15515 57 aa9.78□□□□□ -0.84
NOP56-220ENST00000616692 Q8IZM0 81 aa9.78□□□□□ -0.84
NOP56-220ENST00000616692 HYDINQ4G0P3 5121 aa9.78□□□□□ -0.84
NOP56-220ENST00000616692 IGHV4-28A0A0C4DH34 117 aa9.76□□□□□ -0.85
NOP56-220ENST00000616692 MIR22HGQ0VDD5 57 aa9.76□□□□□ -0.85
NOP56-220ENST00000616692 IGLV1-50A0A075B6I6 118 aa9.75□□□□□ -0.85
NOP56-220ENST00000616692 HERC2O95714 4834 aa9.75□□□□□ -0.85
NOP56-220ENST00000616692 IGKV2D-24A0A075B6R9 120 aa9.74□□□□□ -0.85
NOP56-220ENST00000616692 A0A0J9YWU9 116 aa9.73□□□□□ -0.85
NOP56-220ENST00000616692 REG3GQ6UW15 175 aa9.73□□□□□ -0.85
NOP56-220ENST00000616692 J3QL48 77 aa9.72□□□□□ -0.85
NOP56-220ENST00000616692 DNAH10Q8IVF4 4471 aa9.7□□□□□ -0.86
NOP56-220ENST00000616692 DNAH6Q9C0G6 4158 aa9.7□□□□□ -0.86
NOP56-220ENST00000616692 P0C880 135 aa9.69□□□□□ -0.86
NOP56-220ENST00000616692 DEFB116Q30KQ4 102 aa9.69□□□□□ -0.86
NOP56-220ENST00000616692 SPATA8Q6RVD6 105 aa9.68□□□□□ -0.86
NOP56-220ENST00000616692 WFDC13Q8IUB5 93 aa9.67□□□□□ -0.86
NOP56-220ENST00000616692 DEFB135Q30KP9 77 aa9.66□□□□□ -0.86
NOP56-220ENST00000616692 IGLV5-48A0A075B6I7 105 aa9.64□□□□□ -0.87
NOP56-220ENST00000616692 KRTAP16-1A8MUX0 517 aa9.63□□□□□ -0.87
NOP56-220ENST00000616692 GYPEP15421 78 aa9.63□□□□□ -0.87
NOP56-220ENST00000616692 WFDC10BQ8IUB3 73 aa9.62□□□□□ -0.87
NOP56-220ENST00000616692 XAGE1AQ9HD64 81 aa9.62□□□□□ -0.87
NOP56-220ENST00000616692 INSP01308 110 aa9.61□□□□□ -0.87
NOP56-220ENST00000616692 APLNQ9ULZ1 77 aa9.61□□□□□ -0.87
NOP56-220ENST00000616692 IGLV5-37A0A075B6J1 123 aa9.6□□□□□ -0.87
NOP56-220ENST00000616692 HRES1P13985 223 aa9.6□□□□□ -0.87
NOP56-220ENST00000616692 Q8NBF4 154 aa9.59□□□□□ -0.87
NOP56-220ENST00000616692 PLA2G2DQ9UNK4 145 aa9.59□□□□□ -0.87
NOP56-220ENST00000616692 VPS13DQ5THJ4 4388 aa9.59□□□□□ -0.87
NOP56-220ENST00000616692 KRTAP29-1A8MX34 341 aaPredicted RBP9.59□□□□□ -0.88
NOP56-220ENST00000616692 KRTAP25-1Q3LHN0 102 aa9.59□□□□□ -0.88
NOP56-220ENST00000616692 LINC00528Q8N1L1 170 aa9.58□□□□□ -0.88
NOP56-220ENST00000616692 SPRR4Q96PI1 79 aa9.57□□□□□ -0.88
NOP56-220ENST00000616692 HECTD4Q9Y4D8 3996 aa9.57□□□□□ -0.88
NOP56-220ENST00000616692 ZNF861PO60384 105 aa9.56□□□□□ -0.88
NOP56-220ENST00000616692 A0A1B0GVY2 172 aa9.55□□□□□ -0.88
NOP56-220ENST00000616692 DNAH17Q9UFH2 4485 aa9.55□□□□□ -0.88
NOP56-220ENST00000616692 PCOTHQ58A44 107 aa9.53□□□□□ -0.88
NOP56-220ENST00000616692 C1orf137Q5JT78 98 aa9.52□□□□□ -0.88
NOP56-220ENST00000616692 LINC00483Q53H64 154 aa9.5□□□□□ -0.89
NOP56-220ENST00000616692 C7orf33Q8WU49 177 aa9.5□□□□□ -0.89
NOP56-220ENST00000616692 PRR34Q9NV39 138 aa9.5□□□□□ -0.89
NOP56-220ENST00000616692 Q8N377 158 aa9.5□□□□□ -0.89
NOP56-220ENST00000616692 KMT2AQ03164 3969 aa9.5□□□□□ -0.89
NOP56-220ENST00000616692 TRGV1A0A0A0MS02 117 aa9.49□□□□□ -0.89
NOP56-220ENST00000616692 DEFB131AP59861 70 aa9.48□□□□□ -0.89
NOP56-220ENST00000616692 DEFB105AQ8NG35 78 aa9.48□□□□□ -0.89
NOP56-220ENST00000616692 FRAS1Q86XX4 4008 aa9.47□□□□□ -0.89
NOP56-220ENST00000616692 GIG44P09565 113 aaPredicted RBP9.47□□□□□ -0.89
NOP56-220ENST00000616692 A8MWP4 228 aa9.46□□□□□ -0.89
NOP56-220ENST00000616692 CSNK1G2-AS1Q8NCQ2 148 aa9.46□□□□□ -0.89
NOP56-220ENST00000616692 TNP2Q05952 138 aa9.46□□□□□ -0.9
NOP56-220ENST00000616692 DYNC1H1Q14204 4646 aaKnown RBP9.46□□□□□ -0.9
NOP56-220ENST00000616692 DEFB131BA0A096LNP1 70 aa9.45□□□□□ -0.9
NOP56-220ENST00000616692 DNAH11Q96DT5 4516 aa9.45□□□□□ -0.9
NOP56-220ENST00000616692 UQCR11O14957 56 aa9.44□□□□□ -0.9
NOP56-220ENST00000616692 A0A1B0GU69 56 aa9.42□□□□□ -0.9
NOP56-220ENST00000616692 PCLOQ9Y6V0 5065 aa9.42□□□□□ -0.9
NOP56-220ENST00000616692 KIAA1109Q2LD37 5005 aa9.41□□□□□ -0.9
NOP56-220ENST00000616692 DEFB4AO15263 64 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms