RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 H3BUT2 72 aa10.79□□□□□ -0.68
CDX1-202ENST00000616154 FP248Q71RG6 208 aaPredicted RBP10.79□□□□□ -0.68
CDX1-202ENST00000616154 FAM218AQ96MZ4 157 aa10.79□□□□□ -0.68
CDX1-202ENST00000616154 A0A1B0GX51 115 aa10.78□□□□□ -0.68
CDX1-202ENST00000616154 A0A1W2PPM0 123 aa10.76□□□□□ -0.69
CDX1-202ENST00000616154 C4orf48Q5BLP8 95 aa10.76□□□□□ -0.69
CDX1-202ENST00000616154 CLEC2BQ92478 149 aa10.76□□□□□ -0.69
CDX1-202ENST00000616154 hADV29S1A0JD25 119 aa10.75□□□□□ -0.69
CDX1-202ENST00000616154 GAGE2AQ6NT46 116 aa10.75□□□□□ -0.69
CDX1-202ENST00000616154 LST1O00453 97 aa10.74□□□□□ -0.69
CDX1-202ENST00000616154 SLC25A20O43772 301 aa10.74□□□□□ -0.69
CDX1-202ENST00000616154 LYRM7Q5U5X0 104 aa10.74□□□□□ -0.69
CDX1-202ENST00000616154 Q8NBF4 154 aa10.74□□□□□ -0.69
CDX1-202ENST00000616154 SCGB1C2P0DMR2 95 aa10.73□□□□□ -0.69
CDX1-202ENST00000616154 IGLV5-48A0A075B6I7 105 aa10.71□□□□□ -0.69
CDX1-202ENST00000616154 TRACP01848 142 aa10.71□□□□□ -0.69
CDX1-202ENST00000616154 KRTAP13-3Q3SY46 172 aa10.71□□□□□ -0.69
CDX1-202ENST00000616154 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.71□□□□□ -0.69
CDX1-202ENST00000616154 SSBP3-AS1Q7Z2R9 100 aa10.71□□□□□ -0.69
CDX1-202ENST00000616154 TRBV20-1A0A075B6N2 111 aa10.7□□□□□ -0.7
CDX1-202ENST00000616154 TCL1BO95988 128 aa10.7□□□□□ -0.7
CDX1-202ENST00000616154 SPINK1P00995 79 aa10.7□□□□□ -0.7
CDX1-202ENST00000616154 LINC01547P58512 204 aaPredicted RBP10.7□□□□□ -0.7
CDX1-202ENST00000616154 SNCGO76070 127 aa10.69□□□□□ -0.7
CDX1-202ENST00000616154 FABP2P12104 132 aa10.69□□□□□ -0.7
CDX1-202ENST00000616154 SPRR1BP22528 89 aa10.69□□□□□ -0.7
CDX1-202ENST00000616154 RPS29P62273 56 aaKnown RBP10.69□□□□□ -0.7
CDX1-202ENST00000616154 ST20-AS1Q8NBB2 130 aa10.69□□□□□ -0.7
CDX1-202ENST00000616154 Q6ZQY7 126 aa10.68□□□□□ -0.7
CDX1-202ENST00000616154 MOBPQ13875 183 aa10.67□□□□□ -0.7
CDX1-202ENST00000616154 ATXN8Q156A1 80 aa10.67□□□□□ -0.7
CDX1-202ENST00000616154 ASB16-AS1Q495Z4 193 aa10.66□□□□□ -0.7
CDX1-202ENST00000616154 IGLV9-49A0A0B4J1Y8 123 aa10.65□□□□□ -0.7
CDX1-202ENST00000616154 OCIAD2Q56VL3 154 aa10.65□□□□□ -0.7
CDX1-202ENST00000616154 Q8N377 158 aa10.64□□□□□ -0.71
CDX1-202ENST00000616154 PPDPFLQ8WWR9 84 aa10.64□□□□□ -0.71
CDX1-202ENST00000616154 KRTAP9-6A0A140TA67 174 aa10.63□□□□□ -0.71
CDX1-202ENST00000616154 SPCS1Q9Y6A9 102 aa10.63□□□□□ -0.71
CDX1-202ENST00000616154 TEX49A0A1B0GTD5 131 aa10.62□□□□□ -0.71
CDX1-202ENST00000616154 DNAL4O96015 105 aa10.62□□□□□ -0.71
CDX1-202ENST00000616154 H3BQ85 93 aa10.59□□□□□ -0.71
CDX1-202ENST00000616154 K7EP34 96 aa10.59□□□□□ -0.71
CDX1-202ENST00000616154 GHRHP01286 108 aa10.59□□□□□ -0.71
CDX1-202ENST00000616154 SMIM29Q86T20 159 aa10.59□□□□□ -0.71
CDX1-202ENST00000616154 ORMDL1Q9P0S3 153 aa10.59□□□□□ -0.71
CDX1-202ENST00000616154 SEC61BP60468 96 aaKnown RBP10.58□□□□□ -0.71
CDX1-202ENST00000616154 H3BMG7 143 aa10.58□□□□□ -0.72
CDX1-202ENST00000616154 DEFB105AQ8NG35 78 aa10.58□□□□□ -0.72
CDX1-202ENST00000616154 KRTAP4-1Q9BYQ7 146 aa10.58□□□□□ -0.72
CDX1-202ENST00000616154 C9orf153Q5TBE3 101 aa10.56□□□□□ -0.72
CDX1-202ENST00000616154 TMEM256-PLSCR3K7ERE1 68 aa10.55□□□□□ -0.72
CDX1-202ENST00000616154 C9JAW5 83 aa10.54□□□□□ -0.72
CDX1-202ENST00000616154 GTF2H5Q6ZYL4 71 aa10.54□□□□□ -0.72
CDX1-202ENST00000616154 BAALC-AS2P0C853 105 aa10.53□□□□□ -0.72
CDX1-202ENST00000616154 UBE2V1Q13404 147 aa10.53□□□□□ -0.72
CDX1-202ENST00000616154 LAMTOR3Q9UHA4 124 aa10.53□□□□□ -0.72
CDX1-202ENST00000616154 IGLV8-61A0A075B6I0 122 aa10.51□□□□□ -0.73
CDX1-202ENST00000616154 H3BT86 120 aa10.51□□□□□ -0.73
CDX1-202ENST00000616154 PRO0461Q9UI25 63 aa10.51□□□□□ -0.73
CDX1-202ENST00000616154 A0A1B0GV90 55 aa10.5□□□□□ -0.73
CDX1-202ENST00000616154 NDUFV3P56181 108 aaKnown RBP10.5□□□□□ -0.73
CDX1-202ENST00000616154 XP32Q5T750 250 aa10.5□□□□□ -0.73
CDX1-202ENST00000616154 SMCPP49901 116 aaPredicted RBP10.47□□□□□ -0.73
CDX1-202ENST00000616154 CD164Q04900 197 aa10.46□□□□□ -0.73
CDX1-202ENST00000616154 ANKRD29Q8N6D5 301 aa10.46□□□□□ -0.73
CDX1-202ENST00000616154 MTURNQ8N3F0 131 aa10.45□□□□□ -0.74
CDX1-202ENST00000616154 LIMD2Q9BT23 127 aa10.44□□□□□ -0.74
CDX1-202ENST00000616154 F8WEM9 126 aa10.43□□□□□ -0.74
CDX1-202ENST00000616154 LCE2DQ5TA82 110 aaPredicted RBP10.43□□□□□ -0.74
CDX1-202ENST00000616154 OBSCN-AS1Q96MR7 158 aa10.43□□□□□ -0.74
CDX1-202ENST00000616154 F8W1H4 67 aa10.42□□□□□ -0.74
CDX1-202ENST00000616154 Q5XG85 94 aa10.41□□□□□ -0.74
CDX1-202ENST00000616154 Q6JHZ5 121 aa10.4□□□□□ -0.74
CDX1-202ENST00000616154 JMJD7-PLA2G4BH0Y9G9 81 aa10.38□□□□□ -0.75
CDX1-202ENST00000616154 IGFL1Q6UW32 110 aa10.38□□□□□ -0.75
CDX1-202ENST00000616154 TRBV7-4A0A0J9YYF1 115 aa10.37□□□□□ -0.75
CDX1-202ENST00000616154 LCE2CQ5TA81 110 aa10.37□□□□□ -0.75
CDX1-202ENST00000616154 HRCT1Q6UXD1 115 aa10.36□□□□□ -0.75
CDX1-202ENST00000616154 RBM3P98179 157 aaKnown RBP10.35□□□□□ -0.75
CDX1-202ENST00000616154 LOC110117498A0A087WWA1 95 aa10.33□□□□□ -0.76
CDX1-202ENST00000616154 A0A0G2JQZ4 141 aa10.33□□□□□ -0.76
CDX1-202ENST00000616154 KRTAP19-2Q3LHN2 52 aa10.33□□□□□ -0.76
CDX1-202ENST00000616154 Q6Q795 121 aa10.33□□□□□ -0.76
CDX1-202ENST00000616154 TEN1Q86WV5 123 aa10.32□□□□□ -0.76
CDX1-202ENST00000616154 A0A1B0GV72 72 aa10.31□□□□□ -0.76
CDX1-202ENST00000616154 DSCR8Q96T75 97 aa10.31□□□□□ -0.76
CDX1-202ENST00000616154 PCOTHQ58A44 107 aa10.3□□□□□ -0.76
CDX1-202ENST00000616154 A0A1W2PNM2 257 aa10.29□□□□□ -0.76
CDX1-202ENST00000616154 PDE6GP18545 87 aa10.29□□□□□ -0.76
CDX1-202ENST00000616154 Q6ZQT0 140 aa10.29□□□□□ -0.76
CDX1-202ENST00000616154 FSIP2Q5CZC0 6907 aa10.28□□□□□ -0.76
CDX1-202ENST00000616154 C9orf92A6NGG3 77 aa10.28□□□□□ -0.76
CDX1-202ENST00000616154 ETDBQ3ZM63 59 aa10.28□□□□□ -0.76
CDX1-202ENST00000616154 C14orf132Q9NPU4 83 aa10.28□□□□□ -0.76
CDX1-202ENST00000616154 C1orf195Q5TG92 126 aa10.27□□□□□ -0.77
CDX1-202ENST00000616154 MT1HP80294 61 aa10.26□□□□□ -0.77
CDX1-202ENST00000616154 C21orf62-AS1Q17RA5 79 aa10.26□□□□□ -0.77
CDX1-202ENST00000616154 CRCT1Q9UGL9 99 aa10.26□□□□□ -0.77
CDX1-202ENST00000616154 TRBV7-7A0A0K0K1E9 115 aa10.24□□□□□ -0.77
CDX1-202ENST00000616154 CCKP06307 115 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms