RNA–Protein interactions for RNA: ENST00000616122.4

SYNCRIP-204, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,764 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-204ENST00000616122 BCE1O60756 84 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 CSMD1Q96PZ7 3565 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 DEFB116Q30KQ4 102 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 CSMD2Q7Z408 3487 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 Q8N377 158 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 FAM168BA1KXE4 195 aa3.68□□□□□ -1.82
SYNCRIP-204ENST00000616122 CHTF8P0CG12 524 aa3.67□□□□□ -1.82
SYNCRIP-204ENST00000616122 A0A1B0GW54 56 aa3.67□□□□□ -1.82
SYNCRIP-204ENST00000616122 RETNLBQ9BQ08 111 aa3.67□□□□□ -1.82
SYNCRIP-204ENST00000616122 HRCT1Q6UXD1 115 aa3.67□□□□□ -1.82
SYNCRIP-204ENST00000616122 LINC00208Q96KT6 92 aa3.67□□□□□ -1.82
SYNCRIP-204ENST00000616122 RPS28P62857 69 aaKnown RBP3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 LINC00474Q9P2X8 69 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 APLNQ9ULZ1 77 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 IGLV1-50A0A075B6I6 118 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 NDUFAF8A1L188 74 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 A0A1W2PNM2 257 aa3.66□□□□□ -1.82
SYNCRIP-204ENST00000616122 SPINK6Q6UWN8 80 aa3.65□□□□□ -1.82
SYNCRIP-204ENST00000616122 LINC00476Q8WZB0 136 aa3.65□□□□□ -1.82
SYNCRIP-204ENST00000616122 ERC2-IT1O76042 136 aa3.65□□□□□ -1.82
SYNCRIP-204ENST00000616122 IGLV5-48A0A075B6I7 105 aa3.65□□□□□ -1.83
SYNCRIP-204ENST00000616122 KLKP1Q107X0 134 aa3.65□□□□□ -1.83
SYNCRIP-204ENST00000616122 TLX1NBP0CAT3 122 aa3.65□□□□□ -1.83
SYNCRIP-204ENST00000616122 C16orf90A8MZG2 172 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 C9orf163Q8N9P6 203 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 FAM30AQ9NZY2 134 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 IGLV9-49A0A0B4J1Y8 123 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 KRTAP26-1Q6PEX3 210 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 A0A0G2JQZ4 141 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 A0A1W2PNN7 141 aa3.64□□□□□ -1.83
SYNCRIP-204ENST00000616122 NBDYA0A0U1RRE5 68 aa3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 FBN3Q75N90 2809 aa3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 SPAG11AQ6PDA7 123 aa3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 SMIM29Q86T20 159 aa3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 ATP5EP56381 51 aaPredicted RBP3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 PHF5AQ7RTV0 110 aaKnown RBP3.63□□□□□ -1.83
SYNCRIP-204ENST00000616122 EPM2AB3EWF7 344 aa3.62□□□□□ -1.83
SYNCRIP-204ENST00000616122 H7BZZ5 65 aa3.62□□□□□ -1.83
SYNCRIP-204ENST00000616122 IGLV8-61A0A075B6I0 122 aa3.62□□□□□ -1.83
SYNCRIP-204ENST00000616122 HCG22E2RYF7 251 aa3.62□□□□□ -1.83
SYNCRIP-204ENST00000616122 LY6G6CO95867 125 aa3.62□□□□□ -1.83
SYNCRIP-204ENST00000616122 K7EQZ3 153 aa3.61□□□□□ -1.83
SYNCRIP-204ENST00000616122 SPRR1AP35321 89 aa3.6□□□□□ -1.83
SYNCRIP-204ENST00000616122 CYSTM1Q9H1C7 97 aa3.6□□□□□ -1.83
SYNCRIP-204ENST00000616122 IGFL1Q6UW32 110 aa3.6□□□□□ -1.83
SYNCRIP-204ENST00000616122 KRTAP1-5Q9BYS1 174 aa3.59□□□□□ -1.83
SYNCRIP-204ENST00000616122 CNBPP62633 177 aaKnown RBP3.59□□□□□ -1.83
SYNCRIP-204ENST00000616122 C7orf65Q6ZTY9 151 aa3.59□□□□□ -1.84
SYNCRIP-204ENST00000616122 IGLV5-37A0A075B6J1 123 aa3.58□□□□□ -1.84
SYNCRIP-204ENST00000616122 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
SYNCRIP-204ENST00000616122 SPENQ96T58 3664 aaKnown RBP3.58□□□□□ -1.84
SYNCRIP-204ENST00000616122 COL7A1Q02388 2944 aa3.58□□□□□ -1.84
SYNCRIP-204ENST00000616122 IGHV6-1A0A0B4J1U7 121 aa3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 MEGF8Q7Z7M0 2845 aa3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 OCR1Q9BZK8 76 aa3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 IGLV5-52A0A0A0MRZ9 124 aa3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 RPL37AP61513 92 aaKnown RBP3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 SPRR4Q96PI1 79 aa3.57□□□□□ -1.84
SYNCRIP-204ENST00000616122 H0Y9P7 68 aa3.56□□□□□ -1.84
SYNCRIP-204ENST00000616122 DSCR10P59022 87 aa3.56□□□□□ -1.84
SYNCRIP-204ENST00000616122 PCOTHQ58A44 107 aa3.56□□□□□ -1.84
SYNCRIP-204ENST00000616122 C4orf26Q17RF5 130 aa3.56□□□□□ -1.84
SYNCRIP-204ENST00000616122 PRR15Q8IV56 129 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 C1orf64Q8NEQ6 169 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 CIRBP-AS1Q8TBR5 109 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 hDV103S1A0JD37 113 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 P0C880 135 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 PSPHP1O15172 72 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 KRTAP4-16G5E9R7 235 aaPredicted RBP3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 A0A087WTM6 91 aa3.55□□□□□ -1.84
SYNCRIP-204ENST00000616122 TNP2Q05952 138 aa3.54□□□□□ -1.84
SYNCRIP-204ENST00000616122 RTL8CO15255 209 aa3.53□□□□□ -1.84
SYNCRIP-204ENST00000616122 ANAPC11Q9NYG5 84 aa3.52□□□□□ -1.85
SYNCRIP-204ENST00000616122 PRO0628Q9UI54 55 aa3.52□□□□□ -1.85
SYNCRIP-204ENST00000616122 ZNF861PO60384 105 aa3.52□□□□□ -1.85
SYNCRIP-204ENST00000616122 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.51□□□□□ -1.85
SYNCRIP-204ENST00000616122 LINC00336Q6ZUF6 198 aa3.51□□□□□ -1.85
SYNCRIP-204ENST00000616122 H3BPC8 53 aa3.51□□□□□ -1.85
SYNCRIP-204ENST00000616122 TP53AIP1Q9HCN2 124 aa3.51□□□□□ -1.85
SYNCRIP-204ENST00000616122 SPRR1BP22528 89 aa3.5□□□□□ -1.85
SYNCRIP-204ENST00000616122 KRTAP7-1Q8IUC3 87 aa3.5□□□□□ -1.85
SYNCRIP-204ENST00000616122 OXTP01178 125 aa3.48□□□□□ -1.85
SYNCRIP-204ENST00000616122 TRRAPQ9Y4A5 3859 aa3.48□□□□□ -1.85
SYNCRIP-204ENST00000616122 PANO1I0J062 215 aa3.48□□□□□ -1.85
SYNCRIP-204ENST00000616122 IGLV7-43P04211 117 aa3.48□□□□□ -1.85
SYNCRIP-204ENST00000616122 COX6B2Q6YFQ2 88 aa3.48□□□□□ -1.85
SYNCRIP-204ENST00000616122 LINC00472Q9H8W2 130 aa3.47□□□□□ -1.85
SYNCRIP-204ENST00000616122 SPACA4Q8TDM5 124 aa3.47□□□□□ -1.85
SYNCRIP-204ENST00000616122 MRPL34Q9BQ48 92 aaKnown RBP3.47□□□□□ -1.85
SYNCRIP-204ENST00000616122 A8MUN3 132 aa3.47□□□□□ -1.85
SYNCRIP-204ENST00000616122 H1FX-AS1Q4G0G2 97 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 WWC2-AS2Q96NR7 200 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 C8orf87E5RJ46 101 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 FP248Q71RG6 208 aaPredicted RBP3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 A0A1B0GVX0 72 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 LIMD2Q9BT23 127 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 ATP11AUNQ6ZP68 121 aa3.46□□□□□ -1.86
SYNCRIP-204ENST00000616122 KRTAP11-1Q8IUC1 163 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms