RNA–Protein interactions for RNA: ENST00000616033.4

MSH6-214, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 3,429 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-214ENST00000616033 H3BS24 57 aa8.48□□□□□ -1.05
MSH6-214ENST00000616033 Q1T7F1 81 aa8.48□□□□□ -1.05
MSH6-214ENST00000616033 KCNQ1DNQ9H478 68 aa8.48□□□□□ -1.05
MSH6-214ENST00000616033 IGLV5-48A0A075B6I7 105 aa8.47□□□□□ -1.05
MSH6-214ENST00000616033 KRTAP26-1Q6PEX3 210 aa8.47□□□□□ -1.05
MSH6-214ENST00000616033 DHRS4-AS1Q9P1J3 65 aa8.46□□□□□ -1.05
MSH6-214ENST00000616033 COL7A1Q02388 2944 aa8.46□□□□□ -1.06
MSH6-214ENST00000616033 UBE2AP49459 152 aa8.46□□□□□ -1.06
MSH6-214ENST00000616033 LINC00476Q8WZB0 136 aa8.46□□□□□ -1.06
MSH6-214ENST00000616033 LINC00588Q9Y4M8 146 aa8.46□□□□□ -1.06
MSH6-214ENST00000616033 DEFB131BA0A096LNP1 70 aa8.45□□□□□ -1.06
MSH6-214ENST00000616033 MP68P56378 58 aa8.45□□□□□ -1.06
MSH6-214ENST00000616033 MDFIQ99750 246 aa8.45□□□□□ -1.06
MSH6-214ENST00000616033 SPAG11AQ6PDA7 123 aa8.42□□□□□ -1.06
MSH6-214ENST00000616033 LCA10Q71F78 164 aa8.42□□□□□ -1.06
MSH6-214ENST00000616033 B9D2Q9BPU9 175 aa8.42□□□□□ -1.06
MSH6-214ENST00000616033 PCOTHQ58A44 107 aa8.42□□□□□ -1.06
MSH6-214ENST00000616033 IGLV1-50A0A075B6I6 118 aa8.41□□□□□ -1.06
MSH6-214ENST00000616033 KRTAP24-1Q3LI83 254 aa8.39□□□□□ -1.07
MSH6-214ENST00000616033 IGFL1Q6UW32 110 aa8.39□□□□□ -1.07
MSH6-214ENST00000616033 TENM2Q9NT68 2774 aa8.39□□□□□ -1.07
MSH6-214ENST00000616033 H0Y9J4 135 aa8.39□□□□□ -1.07
MSH6-214ENST00000616033 H0Y9P7 68 aa8.38□□□□□ -1.07
MSH6-214ENST00000616033 REG3GQ6UW15 175 aa8.37□□□□□ -1.07
MSH6-214ENST00000616033 KRTAP7-1Q8IUC3 87 aa8.37□□□□□ -1.07
MSH6-214ENST00000616033 TNP2Q05952 138 aa8.35□□□□□ -1.07
MSH6-214ENST00000616033 CASC2Q6XLA1 102 aa8.35□□□□□ -1.07
MSH6-214ENST00000616033 ADM2Q7Z4H4 148 aa8.35□□□□□ -1.07
MSH6-214ENST00000616033 Q8N9P0 234 aaPredicted RBP8.35□□□□□ -1.07
MSH6-214ENST00000616033 ZCCHC13Q8WW36 166 aaKnown RBP8.35□□□□□ -1.07
MSH6-214ENST00000616033 KRTAP10-11P60412 298 aa8.35□□□□□ -1.07
MSH6-214ENST00000616033 C8orf87E5RJ46 101 aa8.34□□□□□ -1.07
MSH6-214ENST00000616033 LINC01556Q5JQF7 62 aa8.34□□□□□ -1.07
MSH6-214ENST00000616033 SPRR4Q96PI1 79 aa8.34□□□□□ -1.07
MSH6-214ENST00000616033 KRTAP4-16G5E9R7 235 aaPredicted RBP8.33□□□□□ -1.08
MSH6-214ENST00000616033 NDUFS5O43920 106 aa8.31□□□□□ -1.08
MSH6-214ENST00000616033 NDUFB1O75438 58 aa8.31□□□□□ -1.08
MSH6-214ENST00000616033 CHTF8P0CG12 524 aa8.31□□□□□ -1.08
MSH6-214ENST00000616033 STAB2Q8WWQ8 2551 aa8.3□□□□□ -1.08
MSH6-214ENST00000616033 ATP11AUNQ6ZP68 121 aa8.28□□□□□ -1.08
MSH6-214ENST00000616033 LCE6AA0A183 80 aa8.28□□□□□ -1.08
MSH6-214ENST00000616033 SPINK7P58062 85 aa8.27□□□□□ -1.09
MSH6-214ENST00000616033 MOBPQ13875 183 aa8.27□□□□□ -1.09
MSH6-214ENST00000616033 C7orf65Q6ZTY9 151 aa8.27□□□□□ -1.09
MSH6-214ENST00000616033 LIMD2Q9BT23 127 aa8.27□□□□□ -1.09
MSH6-214ENST00000616033 SPRR1AP35321 89 aa8.26□□□□□ -1.09
MSH6-214ENST00000616033 PHF5AQ7RTV0 110 aaKnown RBP8.26□□□□□ -1.09
MSH6-214ENST00000616033 COA5Q86WW8 74 aa8.26□□□□□ -1.09
MSH6-214ENST00000616033 CYP4F30PQ9H0H9 118 aa8.26□□□□□ -1.09
MSH6-214ENST00000616033 ANK2Q01484 3957 aa8.25□□□□□ -1.09
MSH6-214ENST00000616033 IGLV9-49A0A0B4J1Y8 123 aa8.25□□□□□ -1.09
MSH6-214ENST00000616033 A6NN06 94 aa8.24□□□□□ -1.09
MSH6-214ENST00000616033 CNBPP62633 177 aaKnown RBP8.23□□□□□ -1.09
MSH6-214ENST00000616033 LINC00313P59037 77 aa8.23□□□□□ -1.09
MSH6-214ENST00000616033 A0A1B0GW54 56 aa8.22□□□□□ -1.09
MSH6-214ENST00000616033 DNAH10OSP0CZ25 163 aa8.22□□□□□ -1.09
MSH6-214ENST00000616033 H3BNG1 76 aa8.22□□□□□ -1.09
MSH6-214ENST00000616033 TLX1NBP0CAT3 122 aa8.21□□□□□ -1.1
MSH6-214ENST00000616033 FLG2Q5D862 2391 aaPredicted RBP8.21□□□□□ -1.1
MSH6-214ENST00000616033 KRTAP11-1Q8IUC1 163 aa8.2□□□□□ -1.1
MSH6-214ENST00000616033 LOC101927531A0A1B0GV80 90 aa8.2□□□□□ -1.1
MSH6-214ENST00000616033 PLA2G2DQ9UNK4 145 aa8.18□□□□□ -1.1
MSH6-214ENST00000616033 IGHV6-1A0A0B4J1U7 121 aa8.17□□□□□ -1.1
MSH6-214ENST00000616033 KRTAP29-1A8MX34 341 aaPredicted RBP8.17□□□□□ -1.1
MSH6-214ENST00000616033 CDC42SE1Q9NRR8 79 aa8.16□□□□□ -1.1
MSH6-214ENST00000616033 A8MWP4 228 aa8.16□□□□□ -1.1
MSH6-214ENST00000616033 IGLV5-37A0A075B6J1 123 aa8.15□□□□□ -1.1
MSH6-214ENST00000616033 UBE2DNLQ8IWF7 75 aa8.15□□□□□ -1.11
MSH6-214ENST00000616033 DNAH10Q8IVF4 4471 aa8.14□□□□□ -1.11
MSH6-214ENST00000616033 SPINK6Q6UWN8 80 aa8.14□□□□□ -1.11
MSH6-214ENST00000616033 PRR26Q8N8Z3 221 aa8.14□□□□□ -1.11
MSH6-214ENST00000616033 Q75L30 129 aa8.13□□□□□ -1.11
MSH6-214ENST00000616033 LYSTQ99698 3801 aa8.13□□□□□ -1.11
MSH6-214ENST00000616033 ANAPC11Q9NYG5 84 aa8.13□□□□□ -1.11
MSH6-214ENST00000616033 KRTAP1-5Q9BYS1 174 aa8.12□□□□□ -1.11
MSH6-214ENST00000616033 LINC00472Q9H8W2 130 aa8.1□□□□□ -1.11
MSH6-214ENST00000616033 MMP24-AS1A0A0U1RRL7 71 aa8.09□□□□□ -1.11
MSH6-214ENST00000616033 RETNLBQ9BQ08 111 aa8.09□□□□□ -1.11
MSH6-214ENST00000616033 SPANXA2-OT1Q8N9U9 137 aa8.09□□□□□ -1.12
MSH6-214ENST00000616033 K7EIL1 84 aa8.08□□□□□ -1.12
MSH6-214ENST00000616033 CDK2AP2O75956 126 aa8.08□□□□□ -1.12
MSH6-214ENST00000616033 LINC01554Q52M75 96 aa8.08□□□□□ -1.12
MSH6-214ENST00000616033 C9orf163Q8N9P6 203 aa8.08□□□□□ -1.12
MSH6-214ENST00000616033 IGLV8-61A0A075B6I0 122 aa8.07□□□□□ -1.12
MSH6-214ENST00000616033 CMYA5Q8N3K9 4069 aa8.05□□□□□ -1.12
MSH6-214ENST00000616033 PANO1I0J062 215 aa8.04□□□□□ -1.12
MSH6-214ENST00000616033 IGLV7-46A0A075B6I9 117 aa8.04□□□□□ -1.12
MSH6-214ENST00000616033 H3BPC8 53 aa8.03□□□□□ -1.12
MSH6-214ENST00000616033 A0A087X002 238 aa8.03□□□□□ -1.12
MSH6-214ENST00000616033 NOTCH2NLQ7Z3S9 236 aa8.03□□□□□ -1.12
MSH6-214ENST00000616033 HRES1P13985 223 aa8.01□□□□□ -1.13
MSH6-214ENST00000616033 C8orf17Q9NRJ1 99 aa8.01□□□□□ -1.13
MSH6-214ENST00000616033 DMBT1Q9UGM3 2413 aaPredicted RBP8□□□□□ -1.13
MSH6-214ENST00000616033 CSAG1Q6PB30 78 aa8□□□□□ -1.13
MSH6-214ENST00000616033 ZNF706Q9Y5V0 76 aaPredicted RBP7.99□□□□□ -1.13
MSH6-214ENST00000616033 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
MSH6-214ENST00000616033 MRPL34Q9BQ48 92 aaKnown RBP7.93□□□□□ -1.14
MSH6-214ENST00000616033 A0A1B0GVX0 72 aa7.92□□□□□ -1.14
MSH6-214ENST00000616033 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
MSH6-214ENST00000616033 TP53AIP1Q9HCN2 124 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms