RNA–Protein interactions for RNA: ENST00000611625.4

CDH1-212, Transcript of cadherin 1, humanhuman

TSL 5 BASIC

Gene CDH1, Length 4,878 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-212ENST00000611625 C8orf87E5RJ46 101 aa7.89□□□□□ -1.15
CDH1-212ENST00000611625 ZNF861PO60384 105 aa7.89□□□□□ -1.15
CDH1-212ENST00000611625 CYP4F30PQ9H0H9 118 aa7.88□□□□□ -1.15
CDH1-212ENST00000611625 APLNQ9ULZ1 77 aa7.88□□□□□ -1.15
CDH1-212ENST00000611625 A0A087WTM6 91 aa7.87□□□□□ -1.15
CDH1-212ENST00000611625 FAM229AH3BQW9 127 aa7.87□□□□□ -1.15
CDH1-212ENST00000611625 ZZEF1O43149 2961 aa7.86□□□□□ -1.15
CDH1-212ENST00000611625 SPRR1AP35321 89 aa7.86□□□□□ -1.15
CDH1-212ENST00000611625 LOC400499M0QZD8 3231 aa7.86□□□□□ -1.15
CDH1-212ENST00000611625 TNRC18O15417 2968 aaPredicted RBP7.86□□□□□ -1.15
CDH1-212ENST00000611625 COL6A5A8TX70 2615 aa7.85□□□□□ -1.15
CDH1-212ENST00000611625 ANAPC11Q9NYG5 84 aa7.85□□□□□ -1.15
CDH1-212ENST00000611625 SPANXA2-OT1Q8N9U9 137 aa7.84□□□□□ -1.15
CDH1-212ENST00000611625 STAB1Q9NY15 2570 aa7.84□□□□□ -1.15
CDH1-212ENST00000611625 USP34Q70CQ2 3546 aa7.84□□□□□ -1.15
CDH1-212ENST00000611625 KRTAP26-1Q6PEX3 210 aa7.84□□□□□ -1.16
CDH1-212ENST00000611625 PSORS1C2Q9UIG4 136 aa7.83□□□□□ -1.16
CDH1-212ENST00000611625 TYMSOSQ8TAI1 123 aa7.83□□□□□ -1.16
CDH1-212ENST00000611625 SSBP3-AS1Q7Z2R9 100 aa7.83□□□□□ -1.16
CDH1-212ENST00000611625 MYO15AQ9UKN7 3530 aa7.83□□□□□ -1.16
CDH1-212ENST00000611625 DMXL1Q9Y485 3027 aa7.82□□□□□ -1.16
CDH1-212ENST00000611625 Q5XG85 94 aa7.81□□□□□ -1.16
CDH1-212ENST00000611625 ATP11AUNQ6ZP68 121 aa7.78□□□□□ -1.16
CDH1-212ENST00000611625 UTP20O75691 2785 aaKnown RBP7.78□□□□□ -1.16
CDH1-212ENST00000611625 Q96NJ1 140 aa7.78□□□□□ -1.16
CDH1-212ENST00000611625 ZANQ9Y493 2812 aa7.77□□□□□ -1.17
CDH1-212ENST00000611625 IGLV7-43P04211 117 aa7.77□□□□□ -1.17
CDH1-212ENST00000611625 FP248Q71RG6 208 aaPredicted RBP7.76□□□□□ -1.17
CDH1-212ENST00000611625 HRNRQ86YZ3 2850 aaPredicted RBP7.76□□□□□ -1.17
CDH1-212ENST00000611625 PLA2G1BP04054 148 aaKnown RBP7.76□□□□□ -1.17
CDH1-212ENST00000611625 OXTP01178 125 aa7.75□□□□□ -1.17
CDH1-212ENST00000611625 Q1T7F1 81 aa7.75□□□□□ -1.17
CDH1-212ENST00000611625 NBEAL1Q6ZS30 2694 aa7.75□□□□□ -1.17
CDH1-212ENST00000611625 IGLV8-61A0A075B6I0 122 aa7.74□□□□□ -1.17
CDH1-212ENST00000611625 ASH1LQ9NR48 2969 aaKnown RBP7.74□□□□□ -1.17
CDH1-212ENST00000611625 FAM229BQ4G0N7 80 aa7.74□□□□□ -1.17
CDH1-212ENST00000611625 WWC2-AS2Q96NR7 200 aa7.73□□□□□ -1.17
CDH1-212ENST00000611625 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.73□□□□□ -1.17
CDH1-212ENST00000611625 CD164Q04900 197 aa7.72□□□□□ -1.17
CDH1-212ENST00000611625 TNP2Q05952 138 aa7.7□□□□□ -1.18
CDH1-212ENST00000611625 UQCR11O14957 56 aa7.69□□□□□ -1.18
CDH1-212ENST00000611625 MMP24-AS1A0A0U1RRL7 71 aa7.69□□□□□ -1.18
CDH1-212ENST00000611625 SPRR1BP22528 89 aa7.69□□□□□ -1.18
CDH1-212ENST00000611625 ITPR2Q14571 2701 aa7.69□□□□□ -1.18
CDH1-212ENST00000611625 KRTAP1-5Q9BYS1 174 aa7.68□□□□□ -1.18
CDH1-212ENST00000611625 IGLV7-46A0A075B6I9 117 aa7.68□□□□□ -1.18
CDH1-212ENST00000611625 KRTAP4-16G5E9R7 235 aaPredicted RBP7.67□□□□□ -1.18
CDH1-212ENST00000611625 LINC00472Q9H8W2 130 aa7.67□□□□□ -1.18
CDH1-212ENST00000611625 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.19
CDH1-212ENST00000611625 KTN1-AS1Q86SY8 53 aa7.64□□□□□ -1.19
CDH1-212ENST00000611625 NSD1Q96L73 2696 aaPredicted RBP7.64□□□□□ -1.19
CDH1-212ENST00000611625 LINC00304Q8N9R0 145 aa7.64□□□□□ -1.19
CDH1-212ENST00000611625 APCP25054 2843 aa7.63□□□□□ -1.19
CDH1-212ENST00000611625 MIR22HGQ0VDD5 57 aa7.63□□□□□ -1.19
CDH1-212ENST00000611625 CDC42SE1Q9NRR8 79 aa7.63□□□□□ -1.19
CDH1-212ENST00000611625 BAHCC1Q9P281 2608 aa7.63□□□□□ -1.19
CDH1-212ENST00000611625 Q8N9P0 234 aaPredicted RBP7.62□□□□□ -1.19
CDH1-212ENST00000611625 CELSR2Q9HCU4 2923 aa7.6□□□□□ -1.19
CDH1-212ENST00000611625 NIPBLQ6KC79 2804 aaeCLIP7.6□□□□□ -1.19
CDH1-212ENST00000611625 PLAC8Q9NZF1 115 aa7.58□□□□□ -1.2
CDH1-212ENST00000611625 Q75L30 129 aa7.57□□□□□ -1.2
CDH1-212ENST00000611625 NF1P21359 2839 aa7.56□□□□□ -1.2
CDH1-212ENST00000611625 C9orf92A6NGG3 77 aa7.56□□□□□ -1.2
CDH1-212ENST00000611625 FBN2P35556 2912 aa7.56□□□□□ -1.2
CDH1-212ENST00000611625 LCA10Q71F78 164 aa7.55□□□□□ -1.2
CDH1-212ENST00000611625 HRES1P13985 223 aa7.55□□□□□ -1.2
CDH1-212ENST00000611625 WDFY3Q8IZQ1 3526 aa7.54□□□□□ -1.2
CDH1-212ENST00000611625 SMR3BP02814 79 aaPredicted RBP7.54□□□□□ -1.2
CDH1-212ENST00000611625 HIVEP1P15822 2718 aa7.54□□□□□ -1.2
CDH1-212ENST00000611625 LINC01558Q9Y6Z2 57 aa7.53□□□□□ -1.2
CDH1-212ENST00000611625 Q5VV11 94 aa7.53□□□□□ -1.2
CDH1-212ENST00000611625 Q8N1X5 172 aa7.53□□□□□ -1.2
CDH1-212ENST00000611625 STAB2Q8WWQ8 2551 aa7.53□□□□□ -1.2
CDH1-212ENST00000611625 KRTAP29-1A8MX34 341 aaPredicted RBP7.51□□□□□ -1.21
CDH1-212ENST00000611625 ZCCHC13Q8WW36 166 aaKnown RBP7.51□□□□□ -1.21
CDH1-212ENST00000611625 DCHS2Q6V1P9 2916 aa7.49□□□□□ -1.21
CDH1-212ENST00000611625 CRYBG3Q68DQ2 2970 aa7.48□□□□□ -1.21
CDH1-212ENST00000611625 PANO1I0J062 215 aa7.48□□□□□ -1.21
CDH1-212ENST00000611625 KRTAP7-1Q8IUC3 87 aa7.48□□□□□ -1.21
CDH1-212ENST00000611625 RBM12B-AS1Q9P1G2 102 aa7.47□□□□□ -1.21
CDH1-212ENST00000611625 SPINT4Q6UDR6 99 aa7.46□□□□□ -1.21
CDH1-212ENST00000611625 LINC00483Q53H64 154 aa7.45□□□□□ -1.22
CDH1-212ENST00000611625 MXRA5Q9NR99 2828 aa7.45□□□□□ -1.22
CDH1-212ENST00000611625 Q5W150 140 aa7.45□□□□□ -1.22
CDH1-212ENST00000611625 KMT2BQ9UMN6 2715 aaPredicted RBP7.44□□□□□ -1.22
CDH1-212ENST00000611625 DCHS1Q96JQ0 3298 aa7.43□□□□□ -1.22
CDH1-212ENST00000611625 RELNP78509 3460 aa7.42□□□□□ -1.22
CDH1-212ENST00000611625 KRTAP11-1Q8IUC1 163 aa7.42□□□□□ -1.22
CDH1-212ENST00000611625 LCE6AA0A183 80 aa7.41□□□□□ -1.22
CDH1-212ENST00000611625 Q6ZR54 194 aa7.41□□□□□ -1.22
CDH1-212ENST00000611625 SPINK7P58062 85 aa7.4□□□□□ -1.23
CDH1-212ENST00000611625 ZFHX4Q86UP3 3567 aa7.37□□□□□ -1.23
CDH1-212ENST00000611625 ASPMQ8IZT6 3477 aa7.36□□□□□ -1.23
CDH1-212ENST00000611625 PRAC1Q96KF2 57 aa7.34□□□□□ -1.24
CDH1-212ENST00000611625 LAMA5O15230 3695 aa7.33□□□□□ -1.24
CDH1-212ENST00000611625 DMAC1Q96GE9 116 aa7.32□□□□□ -1.24
CDH1-212ENST00000611625 MUC3AQ02505 3323 aa7.32□□□□□ -1.24
CDH1-212ENST00000611625 A0A087X002 238 aa7.32□□□□□ -1.24
CDH1-212ENST00000611625 NOTCH2NLQ7Z3S9 236 aa7.32□□□□□ -1.24
CDH1-212ENST00000611625 KRTAP10-2P60368 255 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms