RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 LINC00313P59037 77 aa9.27□□□□□ -0.93
VPS36-207ENST00000611132 Q8N9P0 234 aaPredicted RBP9.27□□□□□ -0.93
VPS36-207ENST00000611132 FAM229AH3BQW9 127 aa9.26□□□□□ -0.93
VPS36-207ENST00000611132 TNRC18O15417 2968 aaPredicted RBP9.26□□□□□ -0.93
VPS36-207ENST00000611132 ITPR1Q14643 2758 aa9.26□□□□□ -0.93
VPS36-207ENST00000611132 IGLV7-46A0A075B6I9 117 aa9.24□□□□□ -0.93
VPS36-207ENST00000611132 C9orf163Q8N9P6 203 aa9.24□□□□□ -0.93
VPS36-207ENST00000611132 CNBPP62633 177 aaKnown RBP9.24□□□□□ -0.93
VPS36-207ENST00000611132 FLNCQ14315 2725 aa9.23□□□□□ -0.93
VPS36-207ENST00000611132 C1orf134Q5TEV5 83 aa9.23□□□□□ -0.93
VPS36-207ENST00000611132 UQCR11O14957 56 aa9.22□□□□□ -0.93
VPS36-207ENST00000611132 MAST4O15021 2626 aa9.22□□□□□ -0.93
VPS36-207ENST00000611132 LCA10Q71F78 164 aa9.22□□□□□ -0.93
VPS36-207ENST00000611132 Q75L30 129 aa9.22□□□□□ -0.93
VPS36-207ENST00000611132 SETXQ7Z333 2677 aaKnown RBP9.22□□□□□ -0.93
VPS36-207ENST00000611132 KRTAP26-1Q6PEX3 210 aa9.22□□□□□ -0.93
VPS36-207ENST00000611132 Q5VV11 94 aa9.21□□□□□ -0.94
VPS36-207ENST00000611132 RTL8CO15255 209 aa9.2□□□□□ -0.94
VPS36-207ENST00000611132 COL12A1Q99715 3063 aa9.2□□□□□ -0.94
VPS36-207ENST00000611132 SPACA4Q8TDM5 124 aa9.2□□□□□ -0.94
VPS36-207ENST00000611132 IGLV8-61A0A075B6I0 122 aa9.19□□□□□ -0.94
VPS36-207ENST00000611132 TNP2Q05952 138 aa9.19□□□□□ -0.94
VPS36-207ENST00000611132 HELZ2Q9BYK8 2649 aaKnown RBP9.18□□□□□ -0.94
VPS36-207ENST00000611132 IGSF10Q6WRI0 2623 aa9.18□□□□□ -0.94
VPS36-207ENST00000611132 PRR26Q8N8Z3 221 aa9.17□□□□□ -0.94
VPS36-207ENST00000611132 MIR22HGQ0VDD5 57 aa9.16□□□□□ -0.94
VPS36-207ENST00000611132 MMP24-AS1A0A0U1RRL7 71 aa9.15□□□□□ -0.94
VPS36-207ENST00000611132 ZNF861PO60384 105 aa9.15□□□□□ -0.94
VPS36-207ENST00000611132 RBM12B-AS1Q9P1G2 102 aa9.15□□□□□ -0.94
VPS36-207ENST00000611132 ASH1LQ9NR48 2969 aaKnown RBP9.15□□□□□ -0.94
VPS36-207ENST00000611132 WDFY3Q8IZQ1 3526 aa9.14□□□□□ -0.95
VPS36-207ENST00000611132 ZCCHC13Q8WW36 166 aaKnown RBP9.14□□□□□ -0.95
VPS36-207ENST00000611132 ANAPC11Q9NYG5 84 aa9.13□□□□□ -0.95
VPS36-207ENST00000611132 K7EIL1 84 aa9.13□□□□□ -0.95
VPS36-207ENST00000611132 LINC01558Q9Y6Z2 57 aa9.13□□□□□ -0.95
VPS36-207ENST00000611132 HRNRQ86YZ3 2850 aaPredicted RBP9.12□□□□□ -0.95
VPS36-207ENST00000611132 LINC00472Q9H8W2 130 aa9.12□□□□□ -0.95
VPS36-207ENST00000611132 UBR5O95071 2799 aaPredicted RBP9.11□□□□□ -0.95
VPS36-207ENST00000611132 KRTAP4-16G5E9R7 235 aaPredicted RBP9.1□□□□□ -0.95
VPS36-207ENST00000611132 SSBP3-AS1Q7Z2R9 100 aa9.1□□□□□ -0.95
VPS36-207ENST00000611132 NOTCH1P46531 2555 aa9.08□□□□□ -0.96
VPS36-207ENST00000611132 ZANQ9Y493 2812 aa9.08□□□□□ -0.96
VPS36-207ENST00000611132 SPRR1BP22528 89 aa9.08□□□□□ -0.96
VPS36-207ENST00000611132 PSORS1C2Q9UIG4 136 aa9.08□□□□□ -0.96
VPS36-207ENST00000611132 DMXL1Q9Y485 3027 aa9.06□□□□□ -0.96
VPS36-207ENST00000611132 LCE6AA0A183 80 aa9.04□□□□□ -0.96
VPS36-207ENST00000611132 Q96NJ1 140 aa9.04□□□□□ -0.96
VPS36-207ENST00000611132 HRES1P13985 223 aa9.03□□□□□ -0.96
VPS36-207ENST00000611132 A0A087WTM6 91 aa9.03□□□□□ -0.96
VPS36-207ENST00000611132 KRTAP29-1A8MX34 341 aaPredicted RBP9.03□□□□□ -0.96
VPS36-207ENST00000611132 APLNQ9ULZ1 77 aa9.01□□□□□ -0.97
VPS36-207ENST00000611132 TEP1Q99973 2627 aaKnown RBP9□□□□□ -0.97
VPS36-207ENST00000611132 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
VPS36-207ENST00000611132 TYMSOSQ8TAI1 123 aa9□□□□□ -0.97
VPS36-207ENST00000611132 COL6A5A8TX70 2615 aa8.99□□□□□ -0.97
VPS36-207ENST00000611132 SPINK7P58062 85 aa8.99□□□□□ -0.97
VPS36-207ENST00000611132 NBEAL1Q6ZS30 2694 aa8.99□□□□□ -0.97
VPS36-207ENST00000611132 IGLV7-43P04211 117 aa8.98□□□□□ -0.97
VPS36-207ENST00000611132 BAHCC1Q9P281 2608 aa8.98□□□□□ -0.97
VPS36-207ENST00000611132 DCHS1Q96JQ0 3298 aa8.97□□□□□ -0.97
VPS36-207ENST00000611132 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.94□□□□□ -0.98
VPS36-207ENST00000611132 PRAC1Q96KF2 57 aa8.91□□□□□ -0.98
VPS36-207ENST00000611132 PLA2G1BP04054 148 aaKnown RBP8.91□□□□□ -0.98
VPS36-207ENST00000611132 APCP25054 2843 aa8.9□□□□□ -0.99
VPS36-207ENST00000611132 KRTAP1-5Q9BYS1 174 aa8.89□□□□□ -0.99
VPS36-207ENST00000611132 FBN2P35556 2912 aa8.89□□□□□ -0.99
VPS36-207ENST00000611132 LINC01554Q52M75 96 aa8.88□□□□□ -0.99
VPS36-207ENST00000611132 STAB1Q9NY15 2570 aa8.88□□□□□ -0.99
VPS36-207ENST00000611132 Q6ZR54 194 aa8.87□□□□□ -0.99
VPS36-207ENST00000611132 ASPMQ8IZT6 3477 aa8.87□□□□□ -0.99
VPS36-207ENST00000611132 NF1P21359 2839 aa8.87□□□□□ -0.99
VPS36-207ENST00000611132 CELSR2Q9HCU4 2923 aa8.86□□□□□ -0.99
VPS36-207ENST00000611132 Q8N1X5 172 aa8.85□□□□□ -0.99
VPS36-207ENST00000611132 KRTAP7-1Q8IUC3 87 aa8.85□□□□□ -0.99
VPS36-207ENST00000611132 ZFHX4Q86UP3 3567 aa8.84□□□□□ -0.99
VPS36-207ENST00000611132 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
VPS36-207ENST00000611132 Q5W150 140 aa8.82□□□□□ -1
VPS36-207ENST00000611132 A8MU10 97 aa8.81□□□□□ -1
VPS36-207ENST00000611132 NIPBLQ6KC79 2804 aaeCLIP8.8□□□□□ -1
VPS36-207ENST00000611132 NSD1Q96L73 2696 aaPredicted RBP8.79□□□□□ -1
VPS36-207ENST00000611132 SPINT4Q6UDR6 99 aa8.79□□□□□ -1
VPS36-207ENST00000611132 ITPR2Q14571 2701 aa8.78□□□□□ -1
VPS36-207ENST00000611132 DMDP11532 3685 aa8.78□□□□□ -1
VPS36-207ENST00000611132 HIVEP1P15822 2718 aa8.77□□□□□ -1
VPS36-207ENST00000611132 A6NN06 94 aa8.77□□□□□ -1.01
VPS36-207ENST00000611132 LINC00304Q8N9R0 145 aa8.77□□□□□ -1.01
VPS36-207ENST00000611132 DCHS2Q6V1P9 2916 aa8.77□□□□□ -1.01
VPS36-207ENST00000611132 MXRA5Q9NR99 2828 aa8.77□□□□□ -1.01
VPS36-207ENST00000611132 PLAC8Q9NZF1 115 aa8.77□□□□□ -1.01
VPS36-207ENST00000611132 DMAC1Q96GE9 116 aa8.75□□□□□ -1.01
VPS36-207ENST00000611132 LINC00483Q53H64 154 aa8.74□□□□□ -1.01
VPS36-207ENST00000611132 MUC3AQ02505 3323 aa8.74□□□□□ -1.01
VPS36-207ENST00000611132 RELNP78509 3460 aa8.73□□□□□ -1.01
VPS36-207ENST00000611132 KRTAP11-1Q8IUC1 163 aa8.72□□□□□ -1.01
VPS36-207ENST00000611132 C9orf92A6NGG3 77 aa8.72□□□□□ -1.01
VPS36-207ENST00000611132 PANO1I0J062 215 aa8.71□□□□□ -1.02
VPS36-207ENST00000611132 CSAG1Q6PB30 78 aa8.71□□□□□ -1.02
VPS36-207ENST00000611132 CRYBG3Q68DQ2 2970 aa8.71□□□□□ -1.02
VPS36-207ENST00000611132 CSMD1Q96PZ7 3565 aa8.7□□□□□ -1.02
VPS36-207ENST00000611132 STAB2Q8WWQ8 2551 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 282.7 ms