RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 SEC61BP60468 96 aaKnown RBP10.64□□□□□ -0.71
TCF3-219ENST00000610756 XP32Q5T750 250 aa10.64□□□□□ -0.71
TCF3-219ENST00000610756 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.64□□□□□ -0.71
TCF3-219ENST00000610756 FAT4Q6V0I7 4981 aa10.63□□□□□ -0.71
TCF3-219ENST00000610756 F8WEM9 126 aa10.63□□□□□ -0.71
TCF3-219ENST00000610756 RAB37Q96AX2 223 aa10.63□□□□□ -0.71
TCF3-219ENST00000610756 A0A0B4J2C4 111 aa10.61□□□□□ -0.71
TCF3-219ENST00000610756 PPDPFLQ8WWR9 84 aa10.61□□□□□ -0.71
TCF3-219ENST00000610756 IGLV8-61A0A075B6I0 122 aa10.6□□□□□ -0.71
TCF3-219ENST00000610756 C1orf195Q5TG92 126 aa10.59□□□□□ -0.71
TCF3-219ENST00000610756 CEND1Q8N111 149 aa10.59□□□□□ -0.71
TCF3-219ENST00000610756 H0YGX0 51 aa10.58□□□□□ -0.71
TCF3-219ENST00000610756 OCIAD2Q56VL3 154 aa10.58□□□□□ -0.71
TCF3-219ENST00000610756 Q6JHZ5 121 aa10.58□□□□□ -0.71
TCF3-219ENST00000610756 PYY3Q5JQD4 70 aa10.58□□□□□ -0.72
TCF3-219ENST00000610756 TMEM238LA0A1B0GVL6 79 aa10.56□□□□□ -0.72
TCF3-219ENST00000610756 A6NJY4 79 aa10.56□□□□□ -0.72
TCF3-219ENST00000610756 SNCGO76070 127 aa10.56□□□□□ -0.72
TCF3-219ENST00000610756 TCL1BO95988 128 aa10.56□□□□□ -0.72
TCF3-219ENST00000610756 SNHG12Q9BXW3 62 aa10.56□□□□□ -0.72
TCF3-219ENST00000610756 PRO1854Q9UHT4 67 aa10.55□□□□□ -0.72
TCF3-219ENST00000610756 LCE2AQ5TA79 106 aaPredicted RBP10.54□□□□□ -0.72
TCF3-219ENST00000610756 IGFL1Q6UW32 110 aa10.54□□□□□ -0.72
TCF3-219ENST00000610756 CLEC2BQ92478 149 aa10.54□□□□□ -0.72
TCF3-219ENST00000610756 C9orf92A6NGG3 77 aa10.53□□□□□ -0.72
TCF3-219ENST00000610756 KRTAP4-1Q9BYQ7 146 aa10.53□□□□□ -0.72
TCF3-219ENST00000610756 FXYD2P54710 66 aa10.52□□□□□ -0.73
TCF3-219ENST00000610756 FAM218AQ96MZ4 157 aa10.51□□□□□ -0.73
TCF3-219ENST00000610756 TRBV7-7A0A0K0K1E9 115 aa10.49□□□□□ -0.73
TCF3-219ENST00000610756 A0A1B0GX51 115 aa10.49□□□□□ -0.73
TCF3-219ENST00000610756 HSD52Q0P140 79 aa10.47□□□□□ -0.73
TCF3-219ENST00000610756 TMA7Q9Y2S6 64 aaKnown RBP10.47□□□□□ -0.73
TCF3-219ENST00000610756 GHRHP01286 108 aa10.46□□□□□ -0.73
TCF3-219ENST00000610756 H3BUT2 72 aa10.45□□□□□ -0.74
TCF3-219ENST00000610756 NDUFV3P56181 108 aaKnown RBP10.44□□□□□ -0.74
TCF3-219ENST00000610756 TRIAP1O43715 76 aa10.43□□□□□ -0.74
TCF3-219ENST00000610756 PCOTHQ58A44 107 aa10.42□□□□□ -0.74
TCF3-219ENST00000610756 UQCR10Q9UDW1 63 aa10.42□□□□□ -0.74
TCF3-219ENST00000610756 Q6Q795 121 aa10.41□□□□□ -0.74
TCF3-219ENST00000610756 TEN1Q86WV5 123 aa10.38□□□□□ -0.75
TCF3-219ENST00000610756 H3BMG7 143 aa10.37□□□□□ -0.75
TCF3-219ENST00000610756 FABP2P12104 132 aa10.37□□□□□ -0.75
TCF3-219ENST00000610756 K7ERJ3 54 aa10.36□□□□□ -0.75
TCF3-219ENST00000610756 LST1O00453 97 aa10.35□□□□□ -0.75
TCF3-219ENST00000610756 COX6CP09669 75 aa10.35□□□□□ -0.75
TCF3-219ENST00000610756 PSMB2P49721 201 aa10.35□□□□□ -0.75
TCF3-219ENST00000610756 RPL37P61927 97 aaKnown RBP10.35□□□□□ -0.75
TCF3-219ENST00000610756 SS18L2Q9UHA2 77 aa10.34□□□□□ -0.75
TCF3-219ENST00000610756 H3BQ85 93 aa10.33□□□□□ -0.76
TCF3-219ENST00000610756 DNAL4O96015 105 aa10.33□□□□□ -0.76
TCF3-219ENST00000610756 ORMDL1Q9P0S3 153 aa10.31□□□□□ -0.76
TCF3-219ENST00000610756 TMEM256-PLSCR3K7ERE1 68 aa10.3□□□□□ -0.76
TCF3-219ENST00000610756 A0A087WSZ3 146 aa10.28□□□□□ -0.76
TCF3-219ENST00000610756 LCE2CQ5TA81 110 aa10.27□□□□□ -0.77
TCF3-219ENST00000610756 OBSCN-AS1Q96MR7 158 aa10.27□□□□□ -0.77
TCF3-219ENST00000610756 A0A1W2PNM2 257 aa10.26□□□□□ -0.77
TCF3-219ENST00000610756 KRTAP19-2Q3LHN2 52 aa10.26□□□□□ -0.77
TCF3-219ENST00000610756 ANKRD29Q8N6D5 301 aa10.25□□□□□ -0.77
TCF3-219ENST00000610756 TRACP01848 142 aa10.23□□□□□ -0.77
TCF3-219ENST00000610756 SCGB1C2P0DMR2 95 aa10.23□□□□□ -0.77
TCF3-219ENST00000610756 TRBV7-4A0A0J9YYF1 115 aa10.22□□□□□ -0.77
TCF3-219ENST00000610756 UBE2V1Q13404 147 aa10.22□□□□□ -0.77
TCF3-219ENST00000610756 Q75L30 129 aa10.22□□□□□ -0.77
TCF3-219ENST00000610756 Q96NJ1 140 aa10.22□□□□□ -0.77
TCF3-219ENST00000610756 KRTAP9-2Q9BYQ4 174 aa10.2□□□□□ -0.78
TCF3-219ENST00000610756 ATP11AUNQ6ZP68 121 aa10.18□□□□□ -0.78
TCF3-219ENST00000610756 A0A1B0GV72 72 aa10.16□□□□□ -0.78
TCF3-219ENST00000610756 M0R143 59 aa10.14□□□□□ -0.79
TCF3-219ENST00000610756 CCKP06307 115 aa10.14□□□□□ -0.79
TCF3-219ENST00000610756 SMIM6P0DI80 62 aa10.14□□□□□ -0.79
TCF3-219ENST00000610756 C20orf166-AS1Q96NR2 134 aa10.13□□□□□ -0.79
TCF3-219ENST00000610756 RBM3P98179 157 aaKnown RBP10.12□□□□□ -0.79
TCF3-219ENST00000610756 BAALC-AS2P0C853 105 aa10.11□□□□□ -0.79
TCF3-219ENST00000610756 MT1HP80294 61 aa10.11□□□□□ -0.79
TCF3-219ENST00000610756 A8MUU9 505 aa10.1□□□□□ -0.79
TCF3-219ENST00000610756 IGKV4-1P06312 121 aa10.09□□□□□ -0.79
TCF3-219ENST00000610756 LINC00472Q9H8W2 130 aa10.09□□□□□ -0.79
TCF3-219ENST00000610756 DSCR8Q96T75 97 aa10.08□□□□□ -0.8
TCF3-219ENST00000610756 SIGMAR1Q99720 223 aa10.08□□□□□ -0.8
TCF3-219ENST00000610756 DSCR10P59022 87 aa10.07□□□□□ -0.8
TCF3-219ENST00000610756 LINC00313P59037 77 aa10.07□□□□□ -0.8
TCF3-219ENST00000610756 ATXN8Q156A1 80 aa10.05□□□□□ -0.8
TCF3-219ENST00000610756 DEFB116Q30KQ4 102 aa10.04□□□□□ -0.8
TCF3-219ENST00000610756 C9JAW5 83 aa10.03□□□□□ -0.8
TCF3-219ENST00000610756 COX6B2Q6YFQ2 88 aa10.03□□□□□ -0.8
TCF3-219ENST00000610756 NAA38Q9BRA0 125 aaKnown RBP10.03□□□□□ -0.8
TCF3-219ENST00000610756 VPS25Q9BRG1 176 aa10.03□□□□□ -0.8
TCF3-219ENST00000610756 C21orf62-AS1Q17RA5 79 aa10.02□□□□□ -0.81
TCF3-219ENST00000610756 TSTD3H0UI37 97 aa10.01□□□□□ -0.81
TCF3-219ENST00000610756 KRTAP16-1A8MUX0 517 aa9.99□□□□□ -0.81
TCF3-219ENST00000610756 JMJD7-PLA2G4BH0Y9G9 81 aa9.99□□□□□ -0.81
TCF3-219ENST00000610756 NOTCH2NLQ7Z3S9 236 aa9.98□□□□□ -0.81
TCF3-219ENST00000610756 FLGP20930 4061 aaPredicted RBP9.97□□□□□ -0.81
TCF3-219ENST00000610756 LCE2DQ5TA82 110 aaPredicted RBP9.97□□□□□ -0.81
TCF3-219ENST00000610756 Q6ZQT0 140 aa9.96□□□□□ -0.82
TCF3-219ENST00000610756 TRBV20-1A0A075B6N2 111 aa9.95□□□□□ -0.82
TCF3-219ENST00000610756 IGHV6-1A0A0B4J1U7 121 aa9.95□□□□□ -0.82
TCF3-219ENST00000610756 LOC105371267A0A1B0GV96 52 aa9.95□□□□□ -0.82
TCF3-219ENST00000610756 LYRM7Q5U5X0 104 aa9.95□□□□□ -0.82
TCF3-219ENST00000610756 A0A1B0GW54 56 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms