RNA–Protein interactions for RNA: ENST00000609853.1

USP6NL-206, Transcript of USP6 N-terminal like, humanhuman

TSL 4 BASIC

Gene USP6NL, Length 1,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-206ENST00000609853 CRYGAP11844 174 aa7.47□□□□□ -1.21
USP6NL-206ENST00000609853 C9orf153Q5TBE3 101 aa7.47□□□□□ -1.21
USP6NL-206ENST00000609853 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
USP6NL-206ENST00000609853 HIGD2AQ9BW72 106 aa7.47□□□□□ -1.21
USP6NL-206ENST00000609853 SPRR1BP22528 89 aa7.46□□□□□ -1.22
USP6NL-206ENST00000609853 DPH3Q96FX2 82 aa7.45□□□□□ -1.22
USP6NL-206ENST00000609853 C3orf84H3BNL1 204 aa7.44□□□□□ -1.22
USP6NL-206ENST00000609853 BPY2O14599 106 aa7.44□□□□□ -1.22
USP6NL-206ENST00000609853 UBE2AP49459 152 aa7.44□□□□□ -1.22
USP6NL-206ENST00000609853 LINC00476Q8WZB0 136 aa7.44□□□□□ -1.22
USP6NL-206ENST00000609853 C1orf134Q5TEV5 83 aa7.44□□□□□ -1.22
USP6NL-206ENST00000609853 KRTAP11-1Q8IUC1 163 aa7.43□□□□□ -1.22
USP6NL-206ENST00000609853 RTL8CO15255 209 aa7.42□□□□□ -1.22
USP6NL-206ENST00000609853 PANO1I0J062 215 aa7.41□□□□□ -1.22
USP6NL-206ENST00000609853 KRTAP13-1Q8IUC0 172 aa7.41□□□□□ -1.22
USP6NL-206ENST00000609853 TRAV7A0A075B6U4 112 aa7.41□□□□□ -1.22
USP6NL-206ENST00000609853 IGFL1Q6UW32 110 aa7.41□□□□□ -1.22
USP6NL-206ENST00000609853 SCXQ7RTU7 201 aa7.41□□□□□ -1.22
USP6NL-206ENST00000609853 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.41□□□□□ -1.22
USP6NL-206ENST00000609853 IGKV4-1P06312 121 aa7.38□□□□□ -1.23
USP6NL-206ENST00000609853 PLAC8Q9NZF1 115 aa7.38□□□□□ -1.23
USP6NL-206ENST00000609853 WWC2-AS2Q96NR7 200 aa7.38□□□□□ -1.23
USP6NL-206ENST00000609853 SS18L2Q9UHA2 77 aa7.38□□□□□ -1.23
USP6NL-206ENST00000609853 DNAH17Q9UFH2 4485 aa7.37□□□□□ -1.23
USP6NL-206ENST00000609853 IGLV5-52A0A0A0MRZ9 124 aa7.37□□□□□ -1.23
USP6NL-206ENST00000609853 DNAH6Q9C0G6 4158 aa7.37□□□□□ -1.23
USP6NL-206ENST00000609853 HECTD4Q9Y4D8 3996 aa7.36□□□□□ -1.23
USP6NL-206ENST00000609853 LY6G6CO95867 125 aa7.36□□□□□ -1.23
USP6NL-206ENST00000609853 ZNF706Q9Y5V0 76 aaPredicted RBP7.35□□□□□ -1.23
USP6NL-206ENST00000609853 DNAH2Q9P225 4427 aa7.35□□□□□ -1.23
USP6NL-206ENST00000609853 RPL37AP61513 92 aaKnown RBP7.34□□□□□ -1.23
USP6NL-206ENST00000609853 KMT2AQ03164 3969 aa7.33□□□□□ -1.24
USP6NL-206ENST00000609853 Q8N9L7 120 aa7.32□□□□□ -1.24
USP6NL-206ENST00000609853 TMEM258P61165 79 aa7.32□□□□□ -1.24
USP6NL-206ENST00000609853 LINC00483Q53H64 154 aa7.32□□□□□ -1.24
USP6NL-206ENST00000609853 A0A087WSZ3 146 aa7.31□□□□□ -1.24
USP6NL-206ENST00000609853 DSCR10P59022 87 aa7.31□□□□□ -1.24
USP6NL-206ENST00000609853 PSORS1C2Q9UIG4 136 aa7.31□□□□□ -1.24
USP6NL-206ENST00000609853 SRRM2Q9UQ35 2752 aaKnown RBP7.3□□□□□ -1.24
USP6NL-206ENST00000609853 ZNF861PO60384 105 aa7.3□□□□□ -1.24
USP6NL-206ENST00000609853 KLKP1Q107X0 134 aa7.3□□□□□ -1.24
USP6NL-206ENST00000609853 C20orf197Q8N268 126 aa7.3□□□□□ -1.24
USP6NL-206ENST00000609853 OCR1Q9BZK8 76 aa7.28□□□□□ -1.24
USP6NL-206ENST00000609853 A0A0G2JQZ4 141 aa7.27□□□□□ -1.25
USP6NL-206ENST00000609853 ALMS1Q8TCU4 4167 aa7.27□□□□□ -1.25
USP6NL-206ENST00000609853 CYSTM1Q9H1C7 97 aa7.27□□□□□ -1.25
USP6NL-206ENST00000609853 K7EQZ3 153 aa7.26□□□□□ -1.25
USP6NL-206ENST00000609853 NDUFC1O43677 76 aa7.26□□□□□ -1.25
USP6NL-206ENST00000609853 J3KT08 172 aa7.24□□□□□ -1.25
USP6NL-206ENST00000609853 HCG22E2RYF7 251 aa7.24□□□□□ -1.25
USP6NL-206ENST00000609853 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
USP6NL-206ENST00000609853 RPS28P62857 69 aaKnown RBP7.23□□□□□ -1.25
USP6NL-206ENST00000609853 DNAH8Q96JB1 4490 aa7.23□□□□□ -1.25
USP6NL-206ENST00000609853 IGLV7-43P04211 117 aa7.22□□□□□ -1.25
USP6NL-206ENST00000609853 TMEM254Q8TBM7 123 aa7.22□□□□□ -1.25
USP6NL-206ENST00000609853 IGLV9-49A0A0B4J1Y8 123 aa7.21□□□□□ -1.25
USP6NL-206ENST00000609853 A8MWP4 228 aa7.21□□□□□ -1.26
USP6NL-206ENST00000609853 H7BZZ5 65 aa7.21□□□□□ -1.26
USP6NL-206ENST00000609853 KMT2CQ8NEZ4 4911 aaKnown RBP7.2□□□□□ -1.26
USP6NL-206ENST00000609853 KRTAP10-2P60368 255 aa7.2□□□□□ -1.26
USP6NL-206ENST00000609853 PRR15Q8IV56 129 aa7.2□□□□□ -1.26
USP6NL-206ENST00000609853 FRAS1Q86XX4 4008 aa7.2□□□□□ -1.26
USP6NL-206ENST00000609853 LCE6AA0A183 80 aa7.19□□□□□ -1.26
USP6NL-206ENST00000609853 Q6ZSA8 131 aa7.19□□□□□ -1.26
USP6NL-206ENST00000609853 DEFB116Q30KQ4 102 aa7.18□□□□□ -1.26
USP6NL-206ENST00000609853 CIRBP-AS1Q8TBR5 109 aa7.18□□□□□ -1.26
USP6NL-206ENST00000609853 SNURFQ9Y675 71 aa7.18□□□□□ -1.26
USP6NL-206ENST00000609853 DNAH11Q96DT5 4516 aa7.17□□□□□ -1.26
USP6NL-206ENST00000609853 A0A0U1RQV1 116 aa7.17□□□□□ -1.26
USP6NL-206ENST00000609853 NDUFB1O75438 58 aa7.17□□□□□ -1.26
USP6NL-206ENST00000609853 MOBPQ13875 183 aa7.17□□□□□ -1.26
USP6NL-206ENST00000609853 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
USP6NL-206ENST00000609853 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
USP6NL-206ENST00000609853 ATP5EP56381 51 aaPredicted RBP7.16□□□□□ -1.26
USP6NL-206ENST00000609853 RYR3Q15413 4870 aa7.16□□□□□ -1.26
USP6NL-206ENST00000609853 C5orf47Q569G3 176 aa7.16□□□□□ -1.26
USP6NL-206ENST00000609853 FAM30AQ9NZY2 134 aa7.16□□□□□ -1.26
USP6NL-206ENST00000609853 DNAH5Q8TE73 4624 aa7.15□□□□□ -1.26
USP6NL-206ENST00000609853 KRTAP29-1A8MX34 341 aaPredicted RBP7.15□□□□□ -1.27
USP6NL-206ENST00000609853 CD164Q04900 197 aa7.14□□□□□ -1.27
USP6NL-206ENST00000609853 CASC2Q6XLA1 102 aa7.13□□□□□ -1.27
USP6NL-206ENST00000609853 SSBP3-AS1Q7Z2R9 100 aa7.13□□□□□ -1.27
USP6NL-206ENST00000609853 KRTAP10-1P60331 282 aa7.13□□□□□ -1.27
USP6NL-206ENST00000609853 Q96NJ1 140 aa7.13□□□□□ -1.27
USP6NL-206ENST00000609853 PKD1P98161 4303 aa7.12□□□□□ -1.27
USP6NL-206ENST00000609853 WFDC13Q8IUB5 93 aa7.12□□□□□ -1.27
USP6NL-206ENST00000609853 ANAPC11Q9NYG5 84 aa7.11□□□□□ -1.27
USP6NL-206ENST00000609853 FAT2Q9NYQ8 4349 aa7.1□□□□□ -1.27
USP6NL-206ENST00000609853 MP68P56378 58 aa7.09□□□□□ -1.27
USP6NL-206ENST00000609853 FAM229BQ4G0N7 80 aa7.09□□□□□ -1.27
USP6NL-206ENST00000609853 HRCT1Q6UXD1 115 aa7.09□□□□□ -1.27
USP6NL-206ENST00000609853 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
USP6NL-206ENST00000609853 MMP24-AS1A0A0U1RRL7 71 aa7.08□□□□□ -1.28
USP6NL-206ENST00000609853 H3BPC8 53 aa7.08□□□□□ -1.28
USP6NL-206ENST00000609853 CDK2AP2O75956 126 aa7.08□□□□□ -1.28
USP6NL-206ENST00000609853 XP32Q5T750 250 aa7.08□□□□□ -1.28
USP6NL-206ENST00000609853 ZCCHC13Q8WW36 166 aaKnown RBP7.08□□□□□ -1.28
USP6NL-206ENST00000609853 LINC00336Q6ZUF6 198 aa7.07□□□□□ -1.28
USP6NL-206ENST00000609853 hDV103S1A0JD37 113 aa7.07□□□□□ -1.28
USP6NL-206ENST00000609853 A0A1B0GVX0 72 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms