RNA–Protein interactions for RNA: ENST00000609574.1

HDDC2-210, Transcript of HD domain containing 2, humanhuman

TSL 2

Gene HDDC2, Length 607 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-210ENST00000609574 KRTAP9-8Q9BYQ0 159 aa8.12□□□□□ -1.11
HDDC2-210ENST00000609574 OCIAD2Q56VL3 154 aa8.11□□□□□ -1.11
HDDC2-210ENST00000609574 IGFL1Q6UW32 110 aa8.09□□□□□ -1.11
HDDC2-210ENST00000609574 hADV29S1A0JD25 119 aa8.08□□□□□ -1.12
HDDC2-210ENST00000609574 FAM236DA0A1B0GTK5 79 aa8.07□□□□□ -1.12
HDDC2-210ENST00000609574 FAM236CP0DP71 79 aa8.07□□□□□ -1.12
HDDC2-210ENST00000609574 LINC00575Q6W349 94 aa8.07□□□□□ -1.12
HDDC2-210ENST00000609574 Q6ZQY7 126 aa8.07□□□□□ -1.12
HDDC2-210ENST00000609574 SNHG12Q9BXW3 62 aa8.07□□□□□ -1.12
HDDC2-210ENST00000609574 FCGBPQ9Y6R7 5405 aaPredicted RBP8.06□□□□□ -1.12
HDDC2-210ENST00000609574 SS18L2Q9UHA2 77 aa8.06□□□□□ -1.12
HDDC2-210ENST00000609574 COLCA2A8K830 154 aa8.05□□□□□ -1.12
HDDC2-210ENST00000609574 SCGB1D1O95968 90 aa8.05□□□□□ -1.12
HDDC2-210ENST00000609574 KRTDAPP60985 99 aa8.04□□□□□ -1.12
HDDC2-210ENST00000609574 C3orf79P0CE67 100 aa8.03□□□□□ -1.12
HDDC2-210ENST00000609574 C20orf166-AS1Q96NR2 134 aa8.03□□□□□ -1.12
HDDC2-210ENST00000609574 LINC00846Q9NV44 126 aa8.03□□□□□ -1.12
HDDC2-210ENST00000609574 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP8.02□□□□□ -1.13
HDDC2-210ENST00000609574 PPDPFLQ8WWR9 84 aa8.02□□□□□ -1.13
HDDC2-210ENST00000609574 A8MUU9 505 aa8.01□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BKO60814 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BJP06899 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 S100A1P23297 94 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BOP23527 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BBP33778 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BDP58876 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BCP62807 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST2H2BEQ16778 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST2H2BFQ5QNW6 126 aaPredicted RBP8□□□□□ -1.13
HDDC2-210ENST00000609574 KRTAP19-1Q8IUB9 90 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BHQ93079 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BNQ99877 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 HIST1H2BMQ99879 126 aa8□□□□□ -1.13
HDDC2-210ENST00000609574 ANKRD39Q53RE8 183 aa7.99□□□□□ -1.13
HDDC2-210ENST00000609574 RBM12B-AS1Q9P1G2 102 aa7.99□□□□□ -1.13
HDDC2-210ENST00000609574 MT2AP02795 61 aa7.98□□□□□ -1.13
HDDC2-210ENST00000609574 KRTAP10-10P60014 251 aa7.98□□□□□ -1.13
HDDC2-210ENST00000609574 SNCGO76070 127 aa7.97□□□□□ -1.13
HDDC2-210ENST00000609574 H3BUT2 72 aa7.96□□□□□ -1.14
HDDC2-210ENST00000609574 C12orf57Q99622 126 aa7.96□□□□□ -1.14
HDDC2-210ENST00000609574 BVES-AS1Q5T3Y7 98 aa7.95□□□□□ -1.14
HDDC2-210ENST00000609574 ATOH7Q8N100 152 aa7.95□□□□□ -1.14
HDDC2-210ENST00000609574 SNRPEP62304 92 aaKnown RBP7.94□□□□□ -1.14
HDDC2-210ENST00000609574 TEN1Q86WV5 123 aa7.94□□□□□ -1.14
HDDC2-210ENST00000609574 SYNE2Q8WXH0 6885 aaKnown RBP7.92□□□□□ -1.14
HDDC2-210ENST00000609574 LCE2BO14633 110 aa7.92□□□□□ -1.14
HDDC2-210ENST00000609574 DSCR10P59022 87 aa7.91□□□□□ -1.14
HDDC2-210ENST00000609574 A0A087WSZ3 146 aa7.89□□□□□ -1.15
HDDC2-210ENST00000609574 MT1FP04733 61 aa7.89□□□□□ -1.15
HDDC2-210ENST00000609574 LINC00313P59037 77 aa7.89□□□□□ -1.15
HDDC2-210ENST00000609574 MTURNQ8N3F0 131 aa7.89□□□□□ -1.15
HDDC2-210ENST00000609574 SIGMAR1Q99720 223 aa7.88□□□□□ -1.15
HDDC2-210ENST00000609574 KRTAP9-3Q9BYQ3 159 aa7.88□□□□□ -1.15
HDDC2-210ENST00000609574 GHRHP01286 108 aa7.87□□□□□ -1.15
HDDC2-210ENST00000609574 MACF1Q9UPN3 7388 aaKnown RBP7.87□□□□□ -1.15
HDDC2-210ENST00000609574 HSBP1L1C9JCN9 74 aa7.86□□□□□ -1.15
HDDC2-210ENST00000609574 NDUFV3P56181 108 aaKnown RBP7.85□□□□□ -1.15
HDDC2-210ENST00000609574 COA6Q5JTJ3 125 aaKnown RBP7.85□□□□□ -1.15
HDDC2-210ENST00000609574 H0YGX0 51 aa7.81□□□□□ -1.16
HDDC2-210ENST00000609574 H3BMG7 143 aa7.81□□□□□ -1.16
HDDC2-210ENST00000609574 HIST1H4GQ99525 98 aa7.81□□□□□ -1.16
HDDC2-210ENST00000609574 KRTAP16-1A8MUX0 517 aa7.8□□□□□ -1.16
HDDC2-210ENST00000609574 IGKV4-1P06312 121 aa7.8□□□□□ -1.16
HDDC2-210ENST00000609574 HRES1P13985 223 aa7.8□□□□□ -1.16
HDDC2-210ENST00000609574 FABP2P12104 132 aa7.79□□□□□ -1.16
HDDC2-210ENST00000609574 MPLKIPQ8TAP9 179 aa7.79□□□□□ -1.16
HDDC2-210ENST00000609574 RAB37Q96AX2 223 aa7.77□□□□□ -1.17
HDDC2-210ENST00000609574 KRTAP19-6Q3LI70 58 aa7.75□□□□□ -1.17
HDDC2-210ENST00000609574 NOTCH2NLQ7Z3S9 236 aa7.75□□□□□ -1.17
HDDC2-210ENST00000609574 IGHV6-1A0A0B4J1U7 121 aa7.72□□□□□ -1.17
HDDC2-210ENST00000609574 ANKRD29Q8N6D5 301 aa7.72□□□□□ -1.17
HDDC2-210ENST00000609574 S100A2P29034 98 aa7.71□□□□□ -1.18
HDDC2-210ENST00000609574 A0A1B0GX51 115 aa7.7□□□□□ -1.18
HDDC2-210ENST00000609574 A0A1W2PNM2 257 aa7.7□□□□□ -1.18
HDDC2-210ENST00000609574 A8MWP4 228 aa7.7□□□□□ -1.18
HDDC2-210ENST00000609574 TRBV7-4A0A0J9YYF1 115 aa7.69□□□□□ -1.18
HDDC2-210ENST00000609574 DEFB116Q30KQ4 102 aa7.68□□□□□ -1.18
HDDC2-210ENST00000609574 FAM218AQ96MZ4 157 aa7.68□□□□□ -1.18
HDDC2-210ENST00000609574 KRTAP6-3Q3LI67 103 aa7.67□□□□□ -1.18
HDDC2-210ENST00000609574 C8orf87E5RJ46 101 aa7.66□□□□□ -1.18
HDDC2-210ENST00000609574 H3BQ85 93 aa7.66□□□□□ -1.18
HDDC2-210ENST00000609574 TMA7Q9Y2S6 64 aaKnown RBP7.66□□□□□ -1.18
HDDC2-210ENST00000609574 SPINK7P58062 85 aa7.65□□□□□ -1.18
HDDC2-210ENST00000609574 A0A0B4J2C4 111 aa7.64□□□□□ -1.19
HDDC2-210ENST00000609574 TRACP01848 142 aa7.64□□□□□ -1.19
HDDC2-210ENST00000609574 LINC00472Q9H8W2 130 aa7.64□□□□□ -1.19
HDDC2-210ENST00000609574 DNAL4O96015 105 aa7.63□□□□□ -1.19
HDDC2-210ENST00000609574 COX8AP10176 69 aa7.63□□□□□ -1.19
HDDC2-210ENST00000609574 ZCCHC13Q8WW36 166 aaKnown RBP7.63□□□□□ -1.19
HDDC2-210ENST00000609574 HIST1H2BLQ99880 126 aa7.62□□□□□ -1.19
HDDC2-210ENST00000609574 A0A1B0GV72 72 aa7.61□□□□□ -1.19
HDDC2-210ENST00000609574 CCKP06307 115 aa7.61□□□□□ -1.19
HDDC2-210ENST00000609574 ORMDL1Q9P0S3 153 aa7.61□□□□□ -1.19
HDDC2-210ENST00000609574 DLEU1O43261 78 aa7.6□□□□□ -1.19
HDDC2-210ENST00000609574 LYRM7Q5U5X0 104 aa7.6□□□□□ -1.19
HDDC2-210ENST00000609574 HIST3H2BBQ8N257 126 aa7.6□□□□□ -1.19
HDDC2-210ENST00000609574 A0A1B0GVX0 72 aa7.59□□□□□ -1.19
HDDC2-210ENST00000609574 PRO1854Q9UHT4 67 aa7.59□□□□□ -1.19
HDDC2-210ENST00000609574 TMEM238LA0A1B0GVL6 79 aa7.58□□□□□ -1.2
HDDC2-210ENST00000609574 A6NJY4 79 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 130.6 ms