RNA–Protein interactions for RNA: ENST00000606785.1

LINC00397-202, long intergenic non-protein coding RNA 397, humanhuman

TSL 5 BASIC

Gene LINC00397, Length 409 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-202ENST00000606785 COX14Q96I36 57 aa1.86□□□□□ -2.11
LINC00397-202ENST00000606785 KRTAP21-3Q3LHN1 58 aa1.85□□□□□ -2.11
LINC00397-202ENST00000606785 HMCN1Q96RW7 5635 aa1.84□□□□□ -2.12
LINC00397-202ENST00000606785 NAV3Q8IVL0 2385 aa1.83□□□□□ -2.12
LINC00397-202ENST00000606785 K7EIL1 84 aa1.83□□□□□ -2.12
LINC00397-202ENST00000606785 APELAP0DMC3 54 aa1.83□□□□□ -2.12
LINC00397-202ENST00000606785 CACNA1BQ00975 2339 aa1.83□□□□□ -2.12
LINC00397-202ENST00000606785 FLG2Q5D862 2391 aaPredicted RBP1.82□□□□□ -2.12
LINC00397-202ENST00000606785 RP1L1Q8IWN7 2480 aaPredicted RBP1.81□□□□□ -2.12
LINC00397-202ENST00000606785 PRLHP81277 87 aa1.81□□□□□ -2.12
LINC00397-202ENST00000606785 APLNQ9ULZ1 77 aa1.8□□□□□ -2.12
LINC00397-202ENST00000606785 IGF2RP11717 2491 aa1.8□□□□□ -2.12
LINC00397-202ENST00000606785 ZDBF2Q9HCK1 2354 aa1.79□□□□□ -2.12
LINC00397-202ENST00000606785 SPRR1AP35321 89 aa1.79□□□□□ -2.12
LINC00397-202ENST00000606785 PIEZO2Q9H5I5 2752 aa1.79□□□□□ -2.12
LINC00397-202ENST00000606785 TPRP12270 2363 aaKnown RBP1.77□□□□□ -2.13
LINC00397-202ENST00000606785 WNK2Q9Y3S1 2297 aa1.77□□□□□ -2.13
LINC00397-202ENST00000606785 S4R3F8 94 aa1.76□□□□□ -2.13
LINC00397-202ENST00000606785 FAM208BQ5VWN6 2430 aa1.76□□□□□ -2.13
LINC00397-202ENST00000606785 PCNX1Q96RV3 2341 aa1.75□□□□□ -2.13
LINC00397-202ENST00000606785 MUC6Q6W4X9 2439 aa1.75□□□□□ -2.13
LINC00397-202ENST00000606785 SPRR1BP22528 89 aa1.75□□□□□ -2.13
LINC00397-202ENST00000606785 PRO0255Q9UI72 69 aa1.75□□□□□ -2.13
LINC00397-202ENST00000606785 OTOGLQ3ZCN5 2332 aa1.75□□□□□ -2.13
LINC00397-202ENST00000606785 SPINK1P00995 79 aa1.74□□□□□ -2.13
LINC00397-202ENST00000606785 DEFB1P60022 68 aa1.74□□□□□ -2.13
LINC00397-202ENST00000606785 Q5VSD8 79 aa1.73□□□□□ -2.13
LINC00397-202ENST00000606785 RHPN1-AS1Q9BWJ2 59 aa1.73□□□□□ -2.13
LINC00397-202ENST00000606785 NOP10Q9NPE3 64 aaKnown RBP1.72□□□□□ -2.13
LINC00397-202ENST00000606785 DEFB110Q30KQ9 67 aa1.71□□□□□ -2.14
LINC00397-202ENST00000606785 CHD7Q9P2D1 2997 aa1.71□□□□□ -2.14
LINC00397-202ENST00000606785 A0A0C4DFX4 3053 aa1.7□□□□□ -2.14
LINC00397-202ENST00000606785 PTPRZ1P23471 2315 aaPredicted RBP1.7□□□□□ -2.14
LINC00397-202ENST00000606785 WNK1Q9H4A3 2382 aa1.69□□□□□ -2.14
LINC00397-202ENST00000606785 H3BUX3 64 aa1.69□□□□□ -2.14
LINC00397-202ENST00000606785 HTN1P15515 57 aa1.69□□□□□ -2.14
LINC00397-202ENST00000606785 PKDREJQ9NTG1 2253 aa1.69□□□□□ -2.14
LINC00397-202ENST00000606785 JMJD1CQ15652 2540 aa1.69□□□□□ -2.14
LINC00397-202ENST00000606785 DEFB108BQ8NET1 73 aa1.68□□□□□ -2.14
LINC00397-202ENST00000606785 ZNF462Q96JM2 2506 aa1.67□□□□□ -2.14
LINC00397-202ENST00000606785 MGAQ8IWI9 3026 aa1.67□□□□□ -2.14
LINC00397-202ENST00000606785 ROS1P08922 2347 aa1.67□□□□□ -2.14
LINC00397-202ENST00000606785 SPTBN1Q01082 2364 aaKnown RBP1.66□□□□□ -2.14
LINC00397-202ENST00000606785 A0A0D9SG42 100 aa1.66□□□□□ -2.14
LINC00397-202ENST00000606785 HELZ2Q9BYK8 2649 aaKnown RBP1.66□□□□□ -2.14
LINC00397-202ENST00000606785 AKAP6Q13023 2319 aa1.65□□□□□ -2.15
LINC00397-202ENST00000606785 TENM2Q9NT68 2774 aa1.64□□□□□ -2.15
LINC00397-202ENST00000606785 DSPP15924 2871 aaKnown RBP1.64□□□□□ -2.15
LINC00397-202ENST00000606785 CSPG4Q6UVK1 2322 aa1.62□□□□□ -2.15
LINC00397-202ENST00000606785 OTOGQ6ZRI0 2925 aa1.61□□□□□ -2.15
LINC00397-202ENST00000606785 KRTAP10-4P60372 401 aaPredicted RBP1.61□□□□□ -2.15
LINC00397-202ENST00000606785 REV3LO60673 3130 aa1.61□□□□□ -2.15
LINC00397-202ENST00000606785 ACACAQ13085 2346 aa1.6□□□□□ -2.15
LINC00397-202ENST00000606785 SPTA1P02549 2419 aa1.59□□□□□ -2.15
LINC00397-202ENST00000606785 DEFB136Q30KP8 78 aa1.59□□□□□ -2.15
LINC00397-202ENST00000606785 CRCT1Q9UGL9 99 aa1.59□□□□□ -2.15
LINC00397-202ENST00000606785 WDR87Q6ZQQ6 2873 aa1.59□□□□□ -2.16
LINC00397-202ENST00000606785 M0QZ58 72 aa1.58□□□□□ -2.16
LINC00397-202ENST00000606785 SPTBN2O15020 2390 aa1.58□□□□□ -2.16
LINC00397-202ENST00000606785 SPTBN4Q9H254 2564 aa1.57□□□□□ -2.16
LINC00397-202ENST00000606785 ASH1LQ9NR48 2969 aaKnown RBP1.56□□□□□ -2.16
LINC00397-202ENST00000606785 CHD6Q8TD26 2715 aa1.55□□□□□ -2.16
LINC00397-202ENST00000606785 CELSR2Q9HCU4 2923 aa1.55□□□□□ -2.16
LINC00397-202ENST00000606785 C2CD3Q4AC94 2353 aa1.55□□□□□ -2.16
LINC00397-202ENST00000606785 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
LINC00397-202ENST00000606785 PRRC2CQ9Y520 2896 aaKnown RBP1.54□□□□□ -2.16
LINC00397-202ENST00000606785 COL6A3P12111 3177 aa1.53□□□□□ -2.16
LINC00397-202ENST00000606785 A0A096LNI7 61 aa1.53□□□□□ -2.16
LINC00397-202ENST00000606785 TRANK1O15050 2925 aa1.53□□□□□ -2.16
LINC00397-202ENST00000606785 UBR5O95071 2799 aaPredicted RBP1.53□□□□□ -2.16
LINC00397-202ENST00000606785 CD52P31358 61 aa1.53□□□□□ -2.16
LINC00397-202ENST00000606785 VWFP04275 2813 aa1.53□□□□□ -2.17
LINC00397-202ENST00000606785 SPINK6Q6UWN8 80 aa1.52□□□□□ -2.17
LINC00397-202ENST00000606785 ABCA2Q9BZC7 2435 aa1.52□□□□□ -2.17
LINC00397-202ENST00000606785 SRRM2Q9UQ35 2752 aaKnown RBP1.52□□□□□ -2.17
LINC00397-202ENST00000606785 Q9Y3F1 56 aa1.51□□□□□ -2.17
LINC00397-202ENST00000606785 CACNA1HO95180 2353 aa1.5□□□□□ -2.17
LINC00397-202ENST00000606785 F8P00451 2351 aa1.5□□□□□ -2.17
LINC00397-202ENST00000606785 COL6A5A8TX70 2615 aa1.5□□□□□ -2.17
LINC00397-202ENST00000606785 A0A096LPF7 62 aa1.48□□□□□ -2.17
LINC00397-202ENST00000606785 CEP290O15078 2479 aa1.47□□□□□ -2.17
LINC00397-202ENST00000606785 CEP350Q5VT06 3117 aa1.47□□□□□ -2.17
LINC00397-202ENST00000606785 DEFB124Q8NES8 71 aa1.47□□□□□ -2.17
LINC00397-202ENST00000606785 CCDC168Q8NDH2 2452 aa1.46□□□□□ -2.18
LINC00397-202ENST00000606785 EP300Q09472 2414 aaPredicted RBP1.46□□□□□ -2.18
LINC00397-202ENST00000606785 TNRC18O15417 2968 aaPredicted RBP1.46□□□□□ -2.18
LINC00397-202ENST00000606785 ABCA12Q86UK0 2595 aa1.46□□□□□ -2.18
LINC00397-202ENST00000606785 CRYBG3Q68DQ2 2970 aa1.45□□□□□ -2.18
LINC00397-202ENST00000606785 GVINP1Q7Z2Y8 2422 aa1.45□□□□□ -2.18
LINC00397-202ENST00000606785 MEGF8Q7Z7M0 2845 aa1.45□□□□□ -2.18
LINC00397-202ENST00000606785 PKD1L2Q7Z442 2459 aa1.44□□□□□ -2.18
LINC00397-202ENST00000606785 CELSR1Q9NYQ6 3014 aa1.44□□□□□ -2.18
LINC00397-202ENST00000606785 H3BNG1 76 aa1.44□□□□□ -2.18
LINC00397-202ENST00000606785 MAP1BP46821 2468 aaKnown RBP1.44□□□□□ -2.18
LINC00397-202ENST00000606785 AKAP13Q12802 2813 aa1.44□□□□□ -2.18
LINC00397-202ENST00000606785 NBEAQ8NFP9 2946 aa1.43□□□□□ -2.18
LINC00397-202ENST00000606785 ZNF292O60281 2723 aa1.43□□□□□ -2.18
LINC00397-202ENST00000606785 APC2O95996 2303 aa1.43□□□□□ -2.18
LINC00397-202ENST00000606785 NCOR1O75376 2440 aa1.42□□□□□ -2.18
LINC00397-202ENST00000606785 SPART-AS1P0CW21 52 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms