RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 CLEC2BQ92478 149 aa7.68□□□□□ -1.18
CTSA-213ENST00000606782 TAX1BP3O14907 124 aa7.67□□□□□ -1.18
CTSA-213ENST00000606782 Q6ZQY7 126 aa7.67□□□□□ -1.18
CTSA-213ENST00000606782 Q8N377 158 aa7.67□□□□□ -1.18
CTSA-213ENST00000606782 DEFB105AQ8NG35 78 aa7.67□□□□□ -1.18
CTSA-213ENST00000606782 TPRXLQ17RH7 258 aa7.66□□□□□ -1.18
CTSA-213ENST00000606782 SPAG11AQ6PDA7 123 aa7.66□□□□□ -1.18
CTSA-213ENST00000606782 RETNLBQ9BQ08 111 aa7.66□□□□□ -1.18
CTSA-213ENST00000606782 C9orf118A6NHY6 69 aa7.65□□□□□ -1.18
CTSA-213ENST00000606782 SMIM29Q86T20 159 aa7.65□□□□□ -1.18
CTSA-213ENST00000606782 NAA38Q9BRA0 125 aaKnown RBP7.65□□□□□ -1.18
CTSA-213ENST00000606782 IGLV7-46A0A075B6I9 117 aa7.64□□□□□ -1.19
CTSA-213ENST00000606782 OCIAD2Q56VL3 154 aa7.64□□□□□ -1.19
CTSA-213ENST00000606782 A0A0U1RQV1 116 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 H3BUT2 72 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 LST1O00453 97 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 COL5A1-AS1Q5SY13 56 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 PPDPFLQ8WWR9 84 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 LAMTOR3Q9UHA4 124 aa7.63□□□□□ -1.19
CTSA-213ENST00000606782 SSBP3-AS1Q7Z2R9 100 aa7.62□□□□□ -1.19
CTSA-213ENST00000606782 IGLV9-49A0A0B4J1Y8 123 aa7.61□□□□□ -1.19
CTSA-213ENST00000606782 TRACP01848 142 aa7.61□□□□□ -1.19
CTSA-213ENST00000606782 TCL1BO95988 128 aa7.6□□□□□ -1.19
CTSA-213ENST00000606782 GHRHP01286 108 aa7.6□□□□□ -1.19
CTSA-213ENST00000606782 A0A1W2PPM0 123 aa7.59□□□□□ -1.19
CTSA-213ENST00000606782 H3BQ85 93 aa7.59□□□□□ -1.19
CTSA-213ENST00000606782 FP248Q71RG6 208 aaPredicted RBP7.59□□□□□ -1.19
CTSA-213ENST00000606782 CDIP1Q9H305 208 aa7.59□□□□□ -1.19
CTSA-213ENST00000606782 TRBV20-1A0A075B6N2 111 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 DNAL4O96015 105 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 MOBPQ13875 183 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 ATXN8Q156A1 80 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 LYRM7Q5U5X0 104 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 Q8NBF4 154 aa7.58□□□□□ -1.2
CTSA-213ENST00000606782 SPINK1P00995 79 aa7.57□□□□□ -1.2
CTSA-213ENST00000606782 C4orf48Q5BLP8 95 aa7.57□□□□□ -1.2
CTSA-213ENST00000606782 ORMDL1Q9P0S3 153 aa7.57□□□□□ -1.2
CTSA-213ENST00000606782 TMEM256-PLSCR3K7ERE1 68 aa7.56□□□□□ -1.2
CTSA-213ENST00000606782 FABP2P12104 132 aa7.56□□□□□ -1.2
CTSA-213ENST00000606782 LCE2AQ5TA79 106 aaPredicted RBP7.56□□□□□ -1.2
CTSA-213ENST00000606782 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
CTSA-213ENST00000606782 MUC17Q685J3 4493 aa7.56□□□□□ -1.2
CTSA-213ENST00000606782 IGLV8-61A0A075B6I0 122 aa7.55□□□□□ -1.2
CTSA-213ENST00000606782 NDUFV3P56181 108 aaKnown RBP7.55□□□□□ -1.2
CTSA-213ENST00000606782 BAALC-AS2P0C853 105 aa7.54□□□□□ -1.2
CTSA-213ENST00000606782 RPS29P62273 56 aaKnown RBP7.54□□□□□ -1.2
CTSA-213ENST00000606782 UBE2V1Q13404 147 aa7.53□□□□□ -1.2
CTSA-213ENST00000606782 KRTAP13-3Q3SY46 172 aa7.53□□□□□ -1.2
CTSA-213ENST00000606782 F8WEM9 126 aa7.52□□□□□ -1.21
CTSA-213ENST00000606782 Q6JHZ5 121 aa7.5□□□□□ -1.21
CTSA-213ENST00000606782 SPCS1Q9Y6A9 102 aa7.5□□□□□ -1.21
CTSA-213ENST00000606782 H3BMG7 143 aa7.49□□□□□ -1.21
CTSA-213ENST00000606782 CD164Q04900 197 aa7.49□□□□□ -1.21
CTSA-213ENST00000606782 FAT4Q6V0I7 4981 aa7.49□□□□□ -1.21
CTSA-213ENST00000606782 A0A0G2JQZ4 141 aa7.48□□□□□ -1.21
CTSA-213ENST00000606782 C9JAW5 83 aa7.48□□□□□ -1.21
CTSA-213ENST00000606782 IGFL1Q6UW32 110 aa7.48□□□□□ -1.21
CTSA-213ENST00000606782 ASB16-AS1Q495Z4 193 aa7.47□□□□□ -1.21
CTSA-213ENST00000606782 ANKRD29Q8N6D5 301 aa7.47□□□□□ -1.21
CTSA-213ENST00000606782 K7EP34 96 aa7.45□□□□□ -1.22
CTSA-213ENST00000606782 HRCT1Q6UXD1 115 aa7.45□□□□□ -1.22
CTSA-213ENST00000606782 H3BT86 120 aa7.43□□□□□ -1.22
CTSA-213ENST00000606782 RBM3P98179 157 aaKnown RBP7.43□□□□□ -1.22
CTSA-213ENST00000606782 Q6Q795 121 aa7.43□□□□□ -1.22
CTSA-213ENST00000606782 Q5XG85 94 aa7.42□□□□□ -1.22
CTSA-213ENST00000606782 OBSCN-AS1Q96MR7 158 aa7.42□□□□□ -1.22
CTSA-213ENST00000606782 KRTAP9-2Q9BYQ4 174 aa7.42□□□□□ -1.22
CTSA-213ENST00000606782 TRBV7-4A0A0J9YYF1 115 aa7.41□□□□□ -1.22
CTSA-213ENST00000606782 JMJD7-PLA2G4BH0Y9G9 81 aa7.41□□□□□ -1.22
CTSA-213ENST00000606782 GTF2H5Q6ZYL4 71 aa7.41□□□□□ -1.22
CTSA-213ENST00000606782 PRO0461Q9UI25 63 aa7.41□□□□□ -1.22
CTSA-213ENST00000606782 A0A1W2PNM2 257 aa7.4□□□□□ -1.22
CTSA-213ENST00000606782 SMCPP49901 116 aaPredicted RBP7.4□□□□□ -1.22
CTSA-213ENST00000606782 SEC61BP60468 96 aaKnown RBP7.4□□□□□ -1.22
CTSA-213ENST00000606782 TEN1Q86WV5 123 aa7.4□□□□□ -1.22
CTSA-213ENST00000606782 MTURNQ8N3F0 131 aa7.4□□□□□ -1.22
CTSA-213ENST00000606782 TRBV7-7A0A0K0K1E9 115 aa7.39□□□□□ -1.23
CTSA-213ENST00000606782 A0A1B0GV72 72 aa7.39□□□□□ -1.23
CTSA-213ENST00000606782 XP32Q5T750 250 aa7.39□□□□□ -1.23
CTSA-213ENST00000606782 DSCR8Q96T75 97 aa7.39□□□□□ -1.23
CTSA-213ENST00000606782 LIMD2Q9BT23 127 aa7.38□□□□□ -1.23
CTSA-213ENST00000606782 KRTAP4-1Q9BYQ7 146 aa7.38□□□□□ -1.23
CTSA-213ENST00000606782 LOC110117498A0A087WWA1 95 aa7.35□□□□□ -1.23
CTSA-213ENST00000606782 F8W1H4 67 aa7.35□□□□□ -1.23
CTSA-213ENST00000606782 PDE6GP18545 87 aa7.35□□□□□ -1.23
CTSA-213ENST00000606782 CCKP06307 115 aa7.34□□□□□ -1.23
CTSA-213ENST00000606782 Q6ZQT0 140 aa7.34□□□□□ -1.23
CTSA-213ENST00000606782 A0A1B0GV90 55 aa7.32□□□□□ -1.24
CTSA-213ENST00000606782 C1orf195Q5TG92 126 aa7.32□□□□□ -1.24
CTSA-213ENST00000606782 C14orf132Q9NPU4 83 aa7.32□□□□□ -1.24
CTSA-213ENST00000606782 A0A087WSZ3 146 aa7.31□□□□□ -1.24
CTSA-213ENST00000606782 A0A1B0GW54 56 aa7.3□□□□□ -1.24
CTSA-213ENST00000606782 SS18L2Q9UHA2 77 aa7.3□□□□□ -1.24
CTSA-213ENST00000606782 C21orf62-AS1Q17RA5 79 aa7.29□□□□□ -1.24
CTSA-213ENST00000606782 VPS25Q9BRG1 176 aa7.29□□□□□ -1.24
CTSA-213ENST00000606782 LCE2CQ5TA81 110 aa7.25□□□□□ -1.25
CTSA-213ENST00000606782 Q96NJ1 140 aa7.25□□□□□ -1.25
CTSA-213ENST00000606782 ETDBQ3ZM63 59 aa7.24□□□□□ -1.25
CTSA-213ENST00000606782 LINC00472Q9H8W2 130 aa7.24□□□□□ -1.25
CTSA-213ENST00000606782 KRTAP19-2Q3LHN2 52 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 85.6 ms