RNA–Protein interactions for RNA: ENST00000604911.1

LSM1P2-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM1P2, Length 322 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P2-201ENST00000604911 GPR179Q6PRD1 2367 aa3.18□□□□□ -1.9
LSM1P2-201ENST00000604911 USP24Q9UPU5 2620 aa3.17□□□□□ -1.9
LSM1P2-201ENST00000604911 IGFL1Q6UW32 110 aa3.17□□□□□ -1.9
LSM1P2-201ENST00000604911 TYMSOSQ8TAI1 123 aa3.17□□□□□ -1.9
LSM1P2-201ENST00000604911 BRWD1Q9NSI6 2320 aa3.17□□□□□ -1.9
LSM1P2-201ENST00000604911 ANKRD11Q6UB99 2663 aaPredicted RBP3.17□□□□□ -1.9
LSM1P2-201ENST00000604911 DEFB109BQ30KR1 87 aa3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 Q6ZSA8 131 aa3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 SPACA4Q8TDM5 124 aa3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 FASNP49327 2511 aaKnown RBP3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 GCN1Q92616 2671 aaKnown RBP3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 ICE1Q9Y2F5 2266 aa3.16□□□□□ -1.9
LSM1P2-201ENST00000604911 DNAH14Q0VDD8 3507 aa3.15□□□□□ -1.9
LSM1P2-201ENST00000604911 DEFB1P60022 68 aa3.15□□□□□ -1.91
LSM1P2-201ENST00000604911 ABCA1O95477 2261 aa3.14□□□□□ -1.91
LSM1P2-201ENST00000604911 DMXL1Q9Y485 3027 aa3.14□□□□□ -1.91
LSM1P2-201ENST00000604911 CNOT1A5YKK6 2376 aaKnown RBP3.14□□□□□ -1.91
LSM1P2-201ENST00000604911 ZNF462Q96JM2 2506 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 SPEGQ15772 3267 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 SPRR1AP35321 89 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 KRTAP13-3Q3SY46 172 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 LCE3EQ5T5B0 92 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 UNQ6190/PRO20217Q6UXQ8 127 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 MYO15AQ9UKN7 3530 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 NCOR1O75376 2440 aa3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 MAP1BP46821 2468 aaKnown RBP3.13□□□□□ -1.91
LSM1P2-201ENST00000604911 H1FX-AS1Q4G0G2 97 aa3.12□□□□□ -1.91
LSM1P2-201ENST00000604911 LCE3AQ5TA76 89 aa3.12□□□□□ -1.91
LSM1P2-201ENST00000604911 FLNBO75369 2602 aaKnown RBP3.11□□□□□ -1.91
LSM1P2-201ENST00000604911 NAV2Q8IVL1 2488 aa3.11□□□□□ -1.91
LSM1P2-201ENST00000604911 ZFHX2Q9C0A1 2572 aaPredicted RBP3.11□□□□□ -1.91
LSM1P2-201ENST00000604911 ASPMQ8IZT6 3477 aa3.11□□□□□ -1.91
LSM1P2-201ENST00000604911 NCOR2Q9Y618 2525 aa3.11□□□□□ -1.91
LSM1P2-201ENST00000604911 C10orf99Q6UWK7 81 aa3.1□□□□□ -1.91
LSM1P2-201ENST00000604911 KRTAP5-2Q701N4 177 aa3.1□□□□□ -1.91
LSM1P2-201ENST00000604911 ALMS1Q8TCU4 4167 aa3.1□□□□□ -1.91
LSM1P2-201ENST00000604911 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.1□□□□□ -1.91
LSM1P2-201ENST00000604911 WNK2Q9Y3S1 2297 aa3.09□□□□□ -1.91
LSM1P2-201ENST00000604911 RPL37P61927 97 aaKnown RBP3.09□□□□□ -1.91
LSM1P2-201ENST00000604911 Q6ZRN7 208 aaPredicted RBP3.09□□□□□ -1.91
LSM1P2-201ENST00000604911 TEP1Q99973 2627 aaKnown RBP3.09□□□□□ -1.91
LSM1P2-201ENST00000604911 DNAH12Q6ZR08 3092 aa3.08□□□□□ -1.92
LSM1P2-201ENST00000604911 HTN1P15515 57 aa3.08□□□□□ -1.92
LSM1P2-201ENST00000604911 FAM208BQ5VWN6 2430 aa3.08□□□□□ -1.92
LSM1P2-201ENST00000604911 DMDP11532 3685 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 H3BUX3 64 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 DEFB130BP0DP73 79 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 DEFB130AP0DP74 79 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 CACNA1EQ15878 2313 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 ACACBO00763 2458 aa3.07□□□□□ -1.92
LSM1P2-201ENST00000604911 SPRR1BP22528 89 aa3.06□□□□□ -1.92
LSM1P2-201ENST00000604911 ZFYVE26Q68DK2 2539 aa3.06□□□□□ -1.92
LSM1P2-201ENST00000604911 VPS13AQ96RL7 3174 aa3.06□□□□□ -1.92
LSM1P2-201ENST00000604911 ZZEF1O43149 2961 aa3.06□□□□□ -1.92
LSM1P2-201ENST00000604911 CHD9Q3L8U1 2897 aa3.06□□□□□ -1.92
LSM1P2-201ENST00000604911 TPRP12270 2363 aaKnown RBP3.05□□□□□ -1.92
LSM1P2-201ENST00000604911 USP9XQ93008 2570 aaPredicted RBP3.05□□□□□ -1.92
LSM1P2-201ENST00000604911 UBE2DNLQ8IWF7 75 aa3.04□□□□□ -1.92
LSM1P2-201ENST00000604911 WNK1Q9H4A3 2382 aa3.04□□□□□ -1.92
LSM1P2-201ENST00000604911 LOC400499M0QZD8 3231 aa3.04□□□□□ -1.92
LSM1P2-201ENST00000604911 CHD7Q9P2D1 2997 aa3.03□□□□□ -1.92
LSM1P2-201ENST00000604911 FRYQ5TBA9 3013 aa3.03□□□□□ -1.92
LSM1P2-201ENST00000604911 KRTAP10-8P60410 259 aa3.03□□□□□ -1.92
LSM1P2-201ENST00000604911 DEFB119Q8N690 84 aa3.03□□□□□ -1.92
LSM1P2-201ENST00000604911 NOTCH2Q04721 2471 aa3.03□□□□□ -1.92
LSM1P2-201ENST00000604911 FBN3Q75N90 2809 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 TENM4Q6N022 2769 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 SPTBN1Q01082 2364 aaKnown RBP3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 MYO18BQ8IUG5 2567 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 LYNX1P0DP58 116 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 TRIOO75962 3097 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 COL6A6A6NMZ7 2263 aa3.02□□□□□ -1.93
LSM1P2-201ENST00000604911 DNHD1Q96M86 4753 aa3.01□□□□□ -1.93
LSM1P2-201ENST00000604911 NBEAQ8NFP9 2946 aa3.01□□□□□ -1.93
LSM1P2-201ENST00000604911 SMG1Q96Q15 3661 aaKnown RBP3.01□□□□□ -1.93
LSM1P2-201ENST00000604911 KRTAP12-2P59991 146 aa3□□□□□ -1.93
LSM1P2-201ENST00000604911 RELNP78509 3460 aa3□□□□□ -1.93
LSM1P2-201ENST00000604911 GVINP1Q7Z2Y8 2422 aa2.99□□□□□ -1.93
LSM1P2-201ENST00000604911 K7EIL1 84 aa2.99□□□□□ -1.93
LSM1P2-201ENST00000604911 C10orf95Q9H7T3 257 aa2.99□□□□□ -1.93
LSM1P2-201ENST00000604911 HELZ2Q9BYK8 2649 aaKnown RBP2.99□□□□□ -1.93
LSM1P2-201ENST00000604911 WDFY3Q8IZQ1 3526 aa2.98□□□□□ -1.93
LSM1P2-201ENST00000604911 NOP10Q9NPE3 64 aaKnown RBP2.97□□□□□ -1.93
LSM1P2-201ENST00000604911 ITPR1Q14643 2758 aa2.97□□□□□ -1.93
LSM1P2-201ENST00000604911 FRYLO94915 3013 aa2.97□□□□□ -1.93
LSM1P2-201ENST00000604911 PTPN13Q12923 2485 aa2.97□□□□□ -1.93
LSM1P2-201ENST00000604911 WDR87Q6ZQQ6 2873 aa2.97□□□□□ -1.93
LSM1P2-201ENST00000604911 PRLHP81277 87 aa2.96□□□□□ -1.94
LSM1P2-201ENST00000604911 DEFB133Q30KQ1 61 aa2.96□□□□□ -1.94
LSM1P2-201ENST00000604911 FAM186AA6NE01 2351 aa2.96□□□□□ -1.94
LSM1P2-201ENST00000604911 LELP1Q5T871 98 aa2.95□□□□□ -1.94
LSM1P2-201ENST00000604911 PP632Q6XCG6 107 aa2.95□□□□□ -1.94
LSM1P2-201ENST00000604911 PRO0255Q9UI72 69 aa2.95□□□□□ -1.94
LSM1P2-201ENST00000604911 DOPEY1Q5JWR5 2465 aa2.95□□□□□ -1.94
LSM1P2-201ENST00000604911 TEX15Q9BXT5 2789 aa2.94□□□□□ -1.94
LSM1P2-201ENST00000604911 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
LSM1P2-201ENST00000604911 HECTD1Q9ULT8 2610 aa2.94□□□□□ -1.94
LSM1P2-201ENST00000604911 FBN2P35556 2912 aa2.94□□□□□ -1.94
LSM1P2-201ENST00000604911 FLG2Q5D862 2391 aaPredicted RBP2.94□□□□□ -1.94
LSM1P2-201ENST00000604911 IGF2RP11717 2491 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms