RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 CFC1P0CG37 223 aa6.6□□□□□ -1.35
LIG1-217ENST00000599165 PAM16Q9Y3D7 125 aa6.6□□□□□ -1.35
LIG1-217ENST00000599165 IGLV8-61A0A075B6I0 122 aa6.59□□□□□ -1.35
LIG1-217ENST00000599165 VAMP3Q15836 100 aa6.59□□□□□ -1.35
LIG1-217ENST00000599165 SPATA45Q537H7 98 aa6.59□□□□□ -1.35
LIG1-217ENST00000599165 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
LIG1-217ENST00000599165 KRTAP19-2Q3LHN2 52 aa6.58□□□□□ -1.36
LIG1-217ENST00000599165 LCE2CQ5TA81 110 aa6.57□□□□□ -1.36
LIG1-217ENST00000599165 IGFL1Q6UW32 110 aa6.57□□□□□ -1.36
LIG1-217ENST00000599165 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.57□□□□□ -1.36
LIG1-217ENST00000599165 FAM218AQ96MZ4 157 aa6.56□□□□□ -1.36
LIG1-217ENST00000599165 A0A0B4J2C4 111 aa6.55□□□□□ -1.36
LIG1-217ENST00000599165 PCOTHQ58A44 107 aa6.55□□□□□ -1.36
LIG1-217ENST00000599165 BVES-AS1Q5T3Y7 98 aa6.55□□□□□ -1.36
LIG1-217ENST00000599165 VAMP8Q9BV40 100 aa6.55□□□□□ -1.36
LIG1-217ENST00000599165 OCIAD2Q56VL3 154 aa6.54□□□□□ -1.36
LIG1-217ENST00000599165 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
LIG1-217ENST00000599165 TRBV7-7A0A0K0K1E9 115 aa6.53□□□□□ -1.36
LIG1-217ENST00000599165 F8WEM9 126 aa6.53□□□□□ -1.36
LIG1-217ENST00000599165 PYY3Q5JQD4 70 aa6.53□□□□□ -1.36
LIG1-217ENST00000599165 CLEC2BQ92478 149 aa6.53□□□□□ -1.36
LIG1-217ENST00000599165 H3BUT2 72 aa6.52□□□□□ -1.37
LIG1-217ENST00000599165 FXYD2P54710 66 aa6.52□□□□□ -1.37
LIG1-217ENST00000599165 Q6JHZ5 121 aa6.52□□□□□ -1.37
LIG1-217ENST00000599165 CEND1Q8N111 149 aa6.52□□□□□ -1.37
LIG1-217ENST00000599165 PPDPFLQ8WWR9 84 aa6.52□□□□□ -1.37
LIG1-217ENST00000599165 RAB37Q96AX2 223 aa6.51□□□□□ -1.37
LIG1-217ENST00000599165 TCL1BO95988 128 aa6.5□□□□□ -1.37
LIG1-217ENST00000599165 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
LIG1-217ENST00000599165 H0YGX0 51 aa6.48□□□□□ -1.37
LIG1-217ENST00000599165 SNHG12Q9BXW3 62 aa6.47□□□□□ -1.37
LIG1-217ENST00000599165 PRO1854Q9UHT4 67 aa6.47□□□□□ -1.37
LIG1-217ENST00000599165 TRIAP1O43715 76 aa6.46□□□□□ -1.38
LIG1-217ENST00000599165 NDUFV3P56181 108 aaKnown RBP6.45□□□□□ -1.38
LIG1-217ENST00000599165 K7ERJ3 54 aa6.44□□□□□ -1.38
LIG1-217ENST00000599165 MT1HP80294 61 aa6.44□□□□□ -1.38
LIG1-217ENST00000599165 Q6Q795 121 aa6.44□□□□□ -1.38
LIG1-217ENST00000599165 TMEM238LA0A1B0GVL6 79 aa6.43□□□□□ -1.38
LIG1-217ENST00000599165 A0A1B0GX51 115 aa6.43□□□□□ -1.38
LIG1-217ENST00000599165 A6NJY4 79 aa6.43□□□□□ -1.38
LIG1-217ENST00000599165 HSD52Q0P140 79 aa6.43□□□□□ -1.38
LIG1-217ENST00000599165 TMA7Q9Y2S6 64 aaKnown RBP6.42□□□□□ -1.38
LIG1-217ENST00000599165 Q96NJ1 140 aa6.41□□□□□ -1.38
LIG1-217ENST00000599165 A0A1W2PNM2 257 aa6.4□□□□□ -1.38
LIG1-217ENST00000599165 TEN1Q86WV5 123 aa6.4□□□□□ -1.38
LIG1-217ENST00000599165 OBSCN-AS1Q96MR7 158 aa6.4□□□□□ -1.38
LIG1-217ENST00000599165 FLGP20930 4061 aaPredicted RBP6.39□□□□□ -1.39
LIG1-217ENST00000599165 H3BMG7 143 aa6.39□□□□□ -1.39
LIG1-217ENST00000599165 LST1O00453 97 aa6.39□□□□□ -1.39
LIG1-217ENST00000599165 A0A087WSZ3 146 aa6.38□□□□□ -1.39
LIG1-217ENST00000599165 SNCGO76070 127 aa6.37□□□□□ -1.39
LIG1-217ENST00000599165 FABP2P12104 132 aa6.37□□□□□ -1.39
LIG1-217ENST00000599165 Q75L30 129 aa6.37□□□□□ -1.39
LIG1-217ENST00000599165 UQCR10Q9UDW1 63 aa6.37□□□□□ -1.39
LIG1-217ENST00000599165 SS18L2Q9UHA2 77 aa6.35□□□□□ -1.39
LIG1-217ENST00000599165 LCE2DQ5TA82 110 aaPredicted RBP6.34□□□□□ -1.39
LIG1-217ENST00000599165 PSMB2P49721 201 aa6.33□□□□□ -1.4
LIG1-217ENST00000599165 C20orf166-AS1Q96NR2 134 aa6.33□□□□□ -1.4
LIG1-217ENST00000599165 ORMDL1Q9P0S3 153 aa6.33□□□□□ -1.4
LIG1-217ENST00000599165 A0A1B0GV72 72 aa6.32□□□□□ -1.4
LIG1-217ENST00000599165 GHRHP01286 108 aa6.32□□□□□ -1.4
LIG1-217ENST00000599165 LORP23490 312 aaPredicted RBP6.32□□□□□ -1.4
LIG1-217ENST00000599165 A8MUU9 505 aa6.31□□□□□ -1.4
LIG1-217ENST00000599165 TRBV7-4A0A0J9YYF1 115 aa6.3□□□□□ -1.4
LIG1-217ENST00000599165 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
LIG1-217ENST00000599165 DNAL4O96015 105 aa6.3□□□□□ -1.4
LIG1-217ENST00000599165 KRTAP10-6P60371 365 aaPredicted RBP6.3□□□□□ -1.4
LIG1-217ENST00000599165 KRTAP16-1A8MUX0 517 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 TMEM256-PLSCR3K7ERE1 68 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 TRACP01848 142 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 COX6CP09669 75 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 DSCR10P59022 87 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 ANKRD29Q8N6D5 301 aa6.29□□□□□ -1.4
LIG1-217ENST00000599165 UBE2V1Q13404 147 aa6.28□□□□□ -1.4
LIG1-217ENST00000599165 ATP11AUNQ6ZP68 121 aa6.28□□□□□ -1.4
LIG1-217ENST00000599165 NOTCH2NLQ7Z3S9 236 aa6.28□□□□□ -1.4
LIG1-217ENST00000599165 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
LIG1-217ENST00000599165 H3BQ85 93 aa6.27□□□□□ -1.41
LIG1-217ENST00000599165 FSIP2Q5CZC0 6907 aa6.27□□□□□ -1.41
LIG1-217ENST00000599165 CCKP06307 115 aa6.25□□□□□ -1.41
LIG1-217ENST00000599165 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
LIG1-217ENST00000599165 SIGMAR1Q99720 223 aa6.25□□□□□ -1.41
LIG1-217ENST00000599165 IGKV4-1P06312 121 aa6.24□□□□□ -1.41
LIG1-217ENST00000599165 COX6B2Q6YFQ2 88 aa6.24□□□□□ -1.41
LIG1-217ENST00000599165 NAA38Q9BRA0 125 aaKnown RBP6.23□□□□□ -1.41
LIG1-217ENST00000599165 SCGB1C2P0DMR2 95 aa6.22□□□□□ -1.41
LIG1-217ENST00000599165 LINC00313P59037 77 aa6.21□□□□□ -1.42
LIG1-217ENST00000599165 BAALC-AS2P0C853 105 aa6.2□□□□□ -1.42
LIG1-217ENST00000599165 RBM3P98179 157 aaKnown RBP6.2□□□□□ -1.42
LIG1-217ENST00000599165 M0R2T5 61 aa6.19□□□□□ -1.42
LIG1-217ENST00000599165 SMIM6P0DI80 62 aa6.19□□□□□ -1.42
LIG1-217ENST00000599165 M0R143 59 aa6.17□□□□□ -1.42
LIG1-217ENST00000599165 VPS25Q9BRG1 176 aa6.17□□□□□ -1.42
LIG1-217ENST00000599165 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
LIG1-217ENST00000599165 DSCR8Q96T75 97 aa6.16□□□□□ -1.42
LIG1-217ENST00000599165 CRCT1Q9UGL9 99 aa6.16□□□□□ -1.42
LIG1-217ENST00000599165 Q6ZQT0 140 aa6.15□□□□□ -1.42
LIG1-217ENST00000599165 A0A1B0GVX0 72 aa6.14□□□□□ -1.43
LIG1-217ENST00000599165 C9JAW5 83 aa6.14□□□□□ -1.43
LIG1-217ENST00000599165 ATXN8Q156A1 80 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms