RNA–Protein interactions for RNA: ENST00000597968.1

TRIM28-211, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-211ENST00000597968 RPL37P61927 97 aaKnown RBP7.31□□□□□ -1.24
TRIM28-211ENST00000597968 VAMP3Q15836 100 aa7.3□□□□□ -1.24
TRIM28-211ENST00000597968 F8WEM9 126 aa7.28□□□□□ -1.24
TRIM28-211ENST00000597968 HSBP1L1C9JCN9 74 aa7.27□□□□□ -1.25
TRIM28-211ENST00000597968 Q6JHZ5 121 aa7.27□□□□□ -1.25
TRIM28-211ENST00000597968 FSIP2Q5CZC0 6907 aa7.26□□□□□ -1.25
TRIM28-211ENST00000597968 S100A6P06703 90 aa7.25□□□□□ -1.25
TRIM28-211ENST00000597968 LORP23490 312 aaPredicted RBP7.25□□□□□ -1.25
TRIM28-211ENST00000597968 SCGB1D1O95968 90 aa7.24□□□□□ -1.25
TRIM28-211ENST00000597968 LINC00575Q6W349 94 aa7.24□□□□□ -1.25
TRIM28-211ENST00000597968 PPDPFLQ8WWR9 84 aa7.24□□□□□ -1.25
TRIM28-211ENST00000597968 C12orf57Q99622 126 aa7.24□□□□□ -1.25
TRIM28-211ENST00000597968 KRTAP10-6P60371 365 aaPredicted RBP7.23□□□□□ -1.25
TRIM28-211ENST00000597968 hADV29S1A0JD25 119 aa7.22□□□□□ -1.25
TRIM28-211ENST00000597968 CLEC2BQ92478 149 aa7.22□□□□□ -1.25
TRIM28-211ENST00000597968 COX6B2Q6YFQ2 88 aa7.21□□□□□ -1.26
TRIM28-211ENST00000597968 Q6ZQY7 126 aa7.21□□□□□ -1.26
TRIM28-211ENST00000597968 TRBV7-7A0A0K0K1E9 115 aa7.2□□□□□ -1.26
TRIM28-211ENST00000597968 HIST1H4GQ99525 98 aa7.2□□□□□ -1.26
TRIM28-211ENST00000597968 M0R2T5 61 aa7.19□□□□□ -1.26
TRIM28-211ENST00000597968 BVES-AS1Q5T3Y7 98 aa7.19□□□□□ -1.26
TRIM28-211ENST00000597968 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.19□□□□□ -1.26
TRIM28-211ENST00000597968 COX8AP10176 69 aa7.18□□□□□ -1.26
TRIM28-211ENST00000597968 OCIAD2Q56VL3 154 aa7.18□□□□□ -1.26
TRIM28-211ENST00000597968 Q75L30 129 aa7.18□□□□□ -1.26
TRIM28-211ENST00000597968 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
TRIM28-211ENST00000597968 IGFL1Q6UW32 110 aa7.17□□□□□ -1.26
TRIM28-211ENST00000597968 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
TRIM28-211ENST00000597968 C14orf144Q96I85 54 aa7.17□□□□□ -1.26
TRIM28-211ENST00000597968 CFC1P0CG37 223 aa7.14□□□□□ -1.27
TRIM28-211ENST00000597968 SS18L2Q9UHA2 77 aa7.14□□□□□ -1.27
TRIM28-211ENST00000597968 DLEU1O43261 78 aa7.13□□□□□ -1.27
TRIM28-211ENST00000597968 SNCGO76070 127 aa7.13□□□□□ -1.27
TRIM28-211ENST00000597968 Q6Q795 121 aa7.13□□□□□ -1.27
TRIM28-211ENST00000597968 SNHG12Q9BXW3 62 aa7.13□□□□□ -1.27
TRIM28-211ENST00000597968 PAM16Q9Y3D7 125 aa7.13□□□□□ -1.27
TRIM28-211ENST00000597968 H3BUT2 72 aa7.12□□□□□ -1.27
TRIM28-211ENST00000597968 LST1O00453 97 aa7.12□□□□□ -1.27
TRIM28-211ENST00000597968 SPATA45Q537H7 98 aa7.11□□□□□ -1.27
TRIM28-211ENST00000597968 GHRHP01286 108 aa7.1□□□□□ -1.27
TRIM28-211ENST00000597968 RAB37Q96AX2 223 aa7.1□□□□□ -1.27
TRIM28-211ENST00000597968 OBSCN-AS1Q96MR7 158 aa7.1□□□□□ -1.27
TRIM28-211ENST00000597968 SMIM6P0DI80 62 aa7.09□□□□□ -1.27
TRIM28-211ENST00000597968 C2orf91Q6ZV80 131 aa7.09□□□□□ -1.27
TRIM28-211ENST00000597968 FAM218AQ96MZ4 157 aa7.09□□□□□ -1.27
TRIM28-211ENST00000597968 PCP4L1A6NKN8 68 aa7.08□□□□□ -1.28
TRIM28-211ENST00000597968 TEN1Q86WV5 123 aa7.08□□□□□ -1.28
TRIM28-211ENST00000597968 HIGD1BQ9P298 99 aa7.08□□□□□ -1.28
TRIM28-211ENST00000597968 H0YGX0 51 aa7.07□□□□□ -1.28
TRIM28-211ENST00000597968 C20orf166-AS1Q96NR2 134 aa7.07□□□□□ -1.28
TRIM28-211ENST00000597968 VAMP8Q9BV40 100 aa7.06□□□□□ -1.28
TRIM28-211ENST00000597968 A0A0B4J2C4 111 aa7.05□□□□□ -1.28
TRIM28-211ENST00000597968 Q96NJ1 140 aa7.05□□□□□ -1.28
TRIM28-211ENST00000597968 A0A1B0GX51 115 aa7.04□□□□□ -1.28
TRIM28-211ENST00000597968 CEND1Q8N111 149 aa7.04□□□□□ -1.28
TRIM28-211ENST00000597968 A8MUU9 505 aa7.03□□□□□ -1.28
TRIM28-211ENST00000597968 NDUFV3P56181 108 aaKnown RBP7.03□□□□□ -1.28
TRIM28-211ENST00000597968 TRBV20-1A0A075B6N2 111 aa7.02□□□□□ -1.29
TRIM28-211ENST00000597968 FXYD2P54710 66 aa7.02□□□□□ -1.29
TRIM28-211ENST00000597968 PRO1854Q9UHT4 67 aa7.01□□□□□ -1.29
TRIM28-211ENST00000597968 FABP2P12104 132 aa6.99□□□□□ -1.29
TRIM28-211ENST00000597968 A0A087WSZ3 146 aa6.98□□□□□ -1.29
TRIM28-211ENST00000597968 H3BMG7 143 aa6.98□□□□□ -1.29
TRIM28-211ENST00000597968 TRIAP1O43715 76 aa6.98□□□□□ -1.29
TRIM28-211ENST00000597968 H3BQ85 93 aa6.97□□□□□ -1.29
TRIM28-211ENST00000597968 TMEM238LA0A1B0GVL6 79 aa6.96□□□□□ -1.3
TRIM28-211ENST00000597968 A6NJY4 79 aa6.96□□□□□ -1.3
TRIM28-211ENST00000597968 PYY3Q5JQD4 70 aa6.96□□□□□ -1.3
TRIM28-211ENST00000597968 K7ERJ3 54 aa6.95□□□□□ -1.3
TRIM28-211ENST00000597968 A0A1B0GV72 72 aa6.94□□□□□ -1.3
TRIM28-211ENST00000597968 A0A1W2PNM2 257 aa6.94□□□□□ -1.3
TRIM28-211ENST00000597968 TRBV7-4A0A0J9YYF1 115 aa6.92□□□□□ -1.3
TRIM28-211ENST00000597968 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
TRIM28-211ENST00000597968 PSMB2P49721 201 aa6.91□□□□□ -1.3
TRIM28-211ENST00000597968 LINC00313P59037 77 aa6.91□□□□□ -1.3
TRIM28-211ENST00000597968 HSD52Q0P140 79 aa6.91□□□□□ -1.3
TRIM28-211ENST00000597968 DSCR10P59022 87 aa6.9□□□□□ -1.3
TRIM28-211ENST00000597968 ANKRD29Q8N6D5 301 aa6.89□□□□□ -1.31
TRIM28-211ENST00000597968 SIGMAR1Q99720 223 aa6.89□□□□□ -1.31
TRIM28-211ENST00000597968 ORMDL1Q9P0S3 153 aa6.89□□□□□ -1.31
TRIM28-211ENST00000597968 DNAL4O96015 105 aa6.88□□□□□ -1.31
TRIM28-211ENST00000597968 TMEM256-PLSCR3K7ERE1 68 aa6.87□□□□□ -1.31
TRIM28-211ENST00000597968 RBM12B-AS1Q9P1G2 102 aa6.87□□□□□ -1.31
TRIM28-211ENST00000597968 IGKV4-1P06312 121 aa6.86□□□□□ -1.31
TRIM28-211ENST00000597968 DEFB116Q30KQ4 102 aa6.86□□□□□ -1.31
TRIM28-211ENST00000597968 KRTAP16-1A8MUX0 517 aa6.85□□□□□ -1.31
TRIM28-211ENST00000597968 MPLKIPQ8TAP9 179 aa6.85□□□□□ -1.31
TRIM28-211ENST00000597968 UQCR10Q9UDW1 63 aa6.85□□□□□ -1.31
TRIM28-211ENST00000597968 FAM236DA0A1B0GTK5 79 aa6.84□□□□□ -1.31
TRIM28-211ENST00000597968 COX6CP09669 75 aa6.84□□□□□ -1.31
TRIM28-211ENST00000597968 FAM236CP0DP71 79 aa6.84□□□□□ -1.31
TRIM28-211ENST00000597968 NOTCH2NLQ7Z3S9 236 aa6.84□□□□□ -1.31
TRIM28-211ENST00000597968 LINC00472Q9H8W2 130 aa6.84□□□□□ -1.31
TRIM28-211ENST00000597968 USH2AO75445 5202 aa6.83□□□□□ -1.32
TRIM28-211ENST00000597968 SSPOA2VEC9 5147 aa6.82□□□□□ -1.32
TRIM28-211ENST00000597968 CCKP06307 115 aa6.82□□□□□ -1.32
TRIM28-211ENST00000597968 C21orf62-AS1Q17RA5 79 aa6.82□□□□□ -1.32
TRIM28-211ENST00000597968 TRACP01848 142 aa6.81□□□□□ -1.32
TRIM28-211ENST00000597968 SCGB1C2P0DMR2 95 aa6.81□□□□□ -1.32
TRIM28-211ENST00000597968 UBE2V1Q13404 147 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms