RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 Q6ZQY7 126 aa11.8□□□□□ -0.52
PNKP-209ENST00000596726 RAB37Q96AX2 223 aa11.8□□□□□ -0.52
PNKP-209ENST00000596726 MUC17Q685J3 4493 aa11.79□□□□□ -0.52
PNKP-209ENST00000596726 LIMD2Q9BT23 127 aa11.79□□□□□ -0.52
PNKP-209ENST00000596726 H7C2G1 150 aa11.77□□□□□ -0.53
PNKP-209ENST00000596726 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP11.76□□□□□ -0.53
PNKP-209ENST00000596726 FXYD2P54710 66 aa11.75□□□□□ -0.53
PNKP-209ENST00000596726 MUC2Q02817 5179 aa11.75□□□□□ -0.53
PNKP-209ENST00000596726 A0A0G2JQZ4 141 aa11.74□□□□□ -0.53
PNKP-209ENST00000596726 TMEM238LA0A1B0GVL6 79 aa11.74□□□□□ -0.53
PNKP-209ENST00000596726 A6NJY4 79 aa11.74□□□□□ -0.53
PNKP-209ENST00000596726 M0R143 59 aa11.72□□□□□ -0.53
PNKP-209ENST00000596726 Q5XG85 94 aa11.72□□□□□ -0.53
PNKP-209ENST00000596726 PRO1854Q9UHT4 67 aa11.72□□□□□ -0.53
PNKP-209ENST00000596726 H0YGX0 51 aa11.71□□□□□ -0.53
PNKP-209ENST00000596726 PPDPFLQ8WWR9 84 aa11.71□□□□□ -0.53
PNKP-209ENST00000596726 IGLV8-61A0A075B6I0 122 aa11.7□□□□□ -0.54
PNKP-209ENST00000596726 F8WEM9 126 aa11.7□□□□□ -0.54
PNKP-209ENST00000596726 HSD52Q0P140 79 aa11.69□□□□□ -0.54
PNKP-209ENST00000596726 FAM218AQ96MZ4 157 aa11.68□□□□□ -0.54
PNKP-209ENST00000596726 OCIAD2Q56VL3 154 aa11.66□□□□□ -0.54
PNKP-209ENST00000596726 Q6JHZ5 121 aa11.65□□□□□ -0.54
PNKP-209ENST00000596726 SNCGO76070 127 aa11.64□□□□□ -0.55
PNKP-209ENST00000596726 IGFL1Q6UW32 110 aa11.63□□□□□ -0.55
PNKP-209ENST00000596726 A0A1B0GX51 115 aa11.62□□□□□ -0.55
PNKP-209ENST00000596726 ASB16-AS1Q495Z4 193 aa11.62□□□□□ -0.55
PNKP-209ENST00000596726 C1orf195Q5TG92 126 aa11.62□□□□□ -0.55
PNKP-209ENST00000596726 CLEC2BQ92478 149 aa11.62□□□□□ -0.55
PNKP-209ENST00000596726 SNHG12Q9BXW3 62 aa11.62□□□□□ -0.55
PNKP-209ENST00000596726 TRIAP1O43715 76 aa11.61□□□□□ -0.55
PNKP-209ENST00000596726 XP32Q5T750 250 aa11.61□□□□□ -0.55
PNKP-209ENST00000596726 COL5A1-AS1Q5SY13 56 aa11.6□□□□□ -0.55
PNKP-209ENST00000596726 K7ERJ3 54 aa11.58□□□□□ -0.56
PNKP-209ENST00000596726 TCL1BO95988 128 aa11.57□□□□□ -0.56
PNKP-209ENST00000596726 TRBV7-7A0A0K0K1E9 115 aa11.56□□□□□ -0.56
PNKP-209ENST00000596726 A0A0U1RQV1 116 aa11.55□□□□□ -0.56
PNKP-209ENST00000596726 H3BUT2 72 aa11.55□□□□□ -0.56
PNKP-209ENST00000596726 SEC61BP60468 96 aaKnown RBP11.55□□□□□ -0.56
PNKP-209ENST00000596726 BATFQ16520 125 aa11.55□□□□□ -0.56
PNKP-209ENST00000596726 NDUFV3P56181 108 aaKnown RBP11.53□□□□□ -0.56
PNKP-209ENST00000596726 C9orf92A6NGG3 77 aa11.52□□□□□ -0.57
PNKP-209ENST00000596726 GHRHP01286 108 aa11.52□□□□□ -0.57
PNKP-209ENST00000596726 PSMB2P49721 201 aa11.51□□□□□ -0.57
PNKP-209ENST00000596726 COX6CP09669 75 aa11.48□□□□□ -0.57
PNKP-209ENST00000596726 KRTAP4-1Q9BYQ7 146 aa11.48□□□□□ -0.57
PNKP-209ENST00000596726 FAT4Q6V0I7 4981 aa11.47□□□□□ -0.57
PNKP-209ENST00000596726 FABP2P12104 132 aa11.47□□□□□ -0.57
PNKP-209ENST00000596726 Q6Q795 121 aa11.47□□□□□ -0.57
PNKP-209ENST00000596726 H3BMG7 143 aa11.45□□□□□ -0.58
PNKP-209ENST00000596726 DNAL4O96015 105 aa11.44□□□□□ -0.58
PNKP-209ENST00000596726 H3BQ85 93 aa11.43□□□□□ -0.58
PNKP-209ENST00000596726 TEN1Q86WV5 123 aa11.43□□□□□ -0.58
PNKP-209ENST00000596726 ORMDL1Q9P0S3 153 aa11.43□□□□□ -0.58
PNKP-209ENST00000596726 TMEM256-PLSCR3K7ERE1 68 aa11.38□□□□□ -0.59
PNKP-209ENST00000596726 LST1O00453 97 aa11.38□□□□□ -0.59
PNKP-209ENST00000596726 TRACP01848 142 aa11.38□□□□□ -0.59
PNKP-209ENST00000596726 LCE2AQ5TA79 106 aaPredicted RBP11.38□□□□□ -0.59
PNKP-209ENST00000596726 TAX1BP3O14907 124 aa11.37□□□□□ -0.59
PNKP-209ENST00000596726 SS18L2Q9UHA2 77 aa11.37□□□□□ -0.59
PNKP-209ENST00000596726 A0A1W2PNM2 257 aa11.36□□□□□ -0.59
PNKP-209ENST00000596726 SCGB1C2P0DMR2 95 aa11.36□□□□□ -0.59
PNKP-209ENST00000596726 PCOTHQ58A44 107 aa11.36□□□□□ -0.59
PNKP-209ENST00000596726 A0A1B0GV90 55 aa11.35□□□□□ -0.59
PNKP-209ENST00000596726 C9orf118A6NHY6 69 aa11.35□□□□□ -0.59
PNKP-209ENST00000596726 A0A087WSZ3 146 aa11.33□□□□□ -0.6
PNKP-209ENST00000596726 RPL37P61927 97 aaKnown RBP11.33□□□□□ -0.6
PNKP-209ENST00000596726 UBE2V1Q13404 147 aa11.33□□□□□ -0.6
PNKP-209ENST00000596726 ANKRD29Q8N6D5 301 aa11.32□□□□□ -0.6
PNKP-209ENST00000596726 Q96NJ1 140 aa11.29□□□□□ -0.6
PNKP-209ENST00000596726 TRBV7-4A0A0J9YYF1 115 aa11.28□□□□□ -0.6
PNKP-209ENST00000596726 A0A1B0GV72 72 aa11.28□□□□□ -0.6
PNKP-209ENST00000596726 LYRM7Q5U5X0 104 aa11.27□□□□□ -0.61
PNKP-209ENST00000596726 OBSCN-AS1Q96MR7 158 aa11.25□□□□□ -0.61
PNKP-209ENST00000596726 A0A1W2PPM0 123 aa11.24□□□□□ -0.61
PNKP-209ENST00000596726 GTF2H5Q6ZYL4 71 aa11.24□□□□□ -0.61
PNKP-209ENST00000596726 NAA38Q9BRA0 125 aaKnown RBP11.24□□□□□ -0.61
PNKP-209ENST00000596726 BAALC-AS2P0C853 105 aa11.22□□□□□ -0.61
PNKP-209ENST00000596726 CCKP06307 115 aa11.21□□□□□ -0.61
PNKP-209ENST00000596726 RBM3P98179 157 aaKnown RBP11.2□□□□□ -0.62
PNKP-209ENST00000596726 ATXN8Q156A1 80 aa11.2□□□□□ -0.62
PNKP-209ENST00000596726 Q75L30 129 aa11.19□□□□□ -0.62
PNKP-209ENST00000596726 KRTAP19-2Q3LHN2 52 aa11.18□□□□□ -0.62
PNKP-209ENST00000596726 K7EP34 96 aa11.17□□□□□ -0.62
PNKP-209ENST00000596726 SPCS1Q9Y6A9 102 aa11.17□□□□□ -0.62
PNKP-209ENST00000596726 TRBV20-1A0A075B6N2 111 aa11.16□□□□□ -0.62
PNKP-209ENST00000596726 LCE2CQ5TA81 110 aa11.16□□□□□ -0.62
PNKP-209ENST00000596726 DSCR8Q96T75 97 aa11.15□□□□□ -0.62
PNKP-209ENST00000596726 LINC00472Q9H8W2 130 aa11.14□□□□□ -0.63
PNKP-209ENST00000596726 IGKV4-1P06312 121 aa11.12□□□□□ -0.63
PNKP-209ENST00000596726 C20orf166-AS1Q96NR2 134 aa11.12□□□□□ -0.63
PNKP-209ENST00000596726 SIGMAR1Q99720 223 aa11.12□□□□□ -0.63
PNKP-209ENST00000596726 C9JAW5 83 aa11.1□□□□□ -0.63
PNKP-209ENST00000596726 VPS25Q9BRG1 176 aa11.1□□□□□ -0.63
PNKP-209ENST00000596726 A8MUU9 505 aa11.09□□□□□ -0.63
PNKP-209ENST00000596726 DSCR10P59022 87 aa11.09□□□□□ -0.63
PNKP-209ENST00000596726 ATP11AUNQ6ZP68 121 aa11.09□□□□□ -0.63
PNKP-209ENST00000596726 JMJD7-PLA2G4BH0Y9G9 81 aa11.07□□□□□ -0.64
PNKP-209ENST00000596726 DEFB116Q30KQ4 102 aa11.07□□□□□ -0.64
PNKP-209ENST00000596726 F8W1H4 67 aa11.04□□□□□ -0.64
PNKP-209ENST00000596726 LINC00313P59037 77 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms