RNA–Protein interactions for RNA: ENST00000596708.1

CHMP2A-202, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-202ENST00000596708 ANKRD39Q53RE8 183 aa5.53□□□□□ -1.52
CHMP2A-202ENST00000596708 ATP11AUNQ6ZP68 121 aa5.53□□□□□ -1.52
CHMP2A-202ENST00000596708 VAMP3Q15836 100 aa5.52□□□□□ -1.53
CHMP2A-202ENST00000596708 C20orf202A1L168 122 aa5.51□□□□□ -1.53
CHMP2A-202ENST00000596708 ATOH7Q8N100 152 aa5.51□□□□□ -1.53
CHMP2A-202ENST00000596708 TRBV7-7A0A0K0K1E9 115 aa5.5□□□□□ -1.53
CHMP2A-202ENST00000596708 Q6JHZ5 121 aa5.5□□□□□ -1.53
CHMP2A-202ENST00000596708 OBSCN-AS1Q96MR7 158 aa5.5□□□□□ -1.53
CHMP2A-202ENST00000596708 hADV29S1A0JD25 119 aa5.49□□□□□ -1.53
CHMP2A-202ENST00000596708 IGFL1Q6UW32 110 aa5.49□□□□□ -1.53
CHMP2A-202ENST00000596708 LINC00575Q6W349 94 aa5.49□□□□□ -1.53
CHMP2A-202ENST00000596708 Q6ZQY7 126 aa5.49□□□□□ -1.53
CHMP2A-202ENST00000596708 CLEC2BQ92478 149 aa5.49□□□□□ -1.53
CHMP2A-202ENST00000596708 OCIAD2Q56VL3 154 aa5.48□□□□□ -1.53
CHMP2A-202ENST00000596708 Q75L30 129 aa5.48□□□□□ -1.53
CHMP2A-202ENST00000596708 Q96NJ1 140 aa5.47□□□□□ -1.53
CHMP2A-202ENST00000596708 LST1O00453 97 aa5.46□□□□□ -1.54
CHMP2A-202ENST00000596708 COA6Q5JTJ3 125 aaKnown RBP5.45□□□□□ -1.54
CHMP2A-202ENST00000596708 SNHG12Q9BXW3 62 aa5.45□□□□□ -1.54
CHMP2A-202ENST00000596708 CFC1P0CG37 223 aa5.44□□□□□ -1.54
CHMP2A-202ENST00000596708 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.44□□□□□ -1.54
CHMP2A-202ENST00000596708 SNRPEP62304 92 aaKnown RBP5.43□□□□□ -1.54
CHMP2A-202ENST00000596708 TRBV20-1A0A075B6N2 111 aa5.42□□□□□ -1.54
CHMP2A-202ENST00000596708 LOC100996750A0A140TA64 210 aa5.42□□□□□ -1.54
CHMP2A-202ENST00000596708 KRTAP9-7A8MTY7 169 aa5.42□□□□□ -1.54
CHMP2A-202ENST00000596708 H3BUT2 72 aa5.42□□□□□ -1.54
CHMP2A-202ENST00000596708 KRTAP4-6Q9BYQ5 205 aa5.42□□□□□ -1.54
CHMP2A-202ENST00000596708 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.41□□□□□ -1.54
CHMP2A-202ENST00000596708 SCGB1D1O95968 90 aa5.41□□□□□ -1.54
CHMP2A-202ENST00000596708 PPDPFLQ8WWR9 84 aa5.41□□□□□ -1.54
CHMP2A-202ENST00000596708 BVES-AS1Q5T3Y7 98 aa5.4□□□□□ -1.54
CHMP2A-202ENST00000596708 KRTAP9-8Q9BYQ0 159 aa5.4□□□□□ -1.54
CHMP2A-202ENST00000596708 SS18L2Q9UHA2 77 aa5.4□□□□□ -1.54
CHMP2A-202ENST00000596708 HSBP1L1C9JCN9 74 aa5.39□□□□□ -1.55
CHMP2A-202ENST00000596708 C20orf166-AS1Q96NR2 134 aa5.39□□□□□ -1.55
CHMP2A-202ENST00000596708 C12orf57Q99622 126 aa5.39□□□□□ -1.55
CHMP2A-202ENST00000596708 A8MUU9 505 aa5.38□□□□□ -1.55
CHMP2A-202ENST00000596708 TEN1Q86WV5 123 aa5.37□□□□□ -1.55
CHMP2A-202ENST00000596708 SSPOA2VEC9 5147 aa5.36□□□□□ -1.55
CHMP2A-202ENST00000596708 FAM236DA0A1B0GTK5 79 aa5.36□□□□□ -1.55
CHMP2A-202ENST00000596708 SNCGO76070 127 aa5.36□□□□□ -1.55
CHMP2A-202ENST00000596708 FAM236CP0DP71 79 aa5.36□□□□□ -1.55
CHMP2A-202ENST00000596708 HIST1H4GQ99525 98 aa5.36□□□□□ -1.55
CHMP2A-202ENST00000596708 A0A087WSZ3 146 aa5.35□□□□□ -1.55
CHMP2A-202ENST00000596708 DSCR10P59022 87 aa5.35□□□□□ -1.55
CHMP2A-202ENST00000596708 S100A2P29034 98 aa5.34□□□□□ -1.55
CHMP2A-202ENST00000596708 NDUFV3P56181 108 aaKnown RBP5.34□□□□□ -1.55
CHMP2A-202ENST00000596708 USH2AO75445 5202 aa5.34□□□□□ -1.55
CHMP2A-202ENST00000596708 H0YGX0 51 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 H3BMG7 143 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 MT2AP02795 61 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 HIST3H2BBQ8N257 126 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 RAB37Q96AX2 223 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 SIGMAR1Q99720 223 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 HIST1H2BLQ99880 126 aa5.31□□□□□ -1.56
CHMP2A-202ENST00000596708 FABP2P12104 132 aa5.3□□□□□ -1.56
CHMP2A-202ENST00000596708 LINC00313P59037 77 aa5.3□□□□□ -1.56
CHMP2A-202ENST00000596708 RBM12B-AS1Q9P1G2 102 aa5.3□□□□□ -1.56
CHMP2A-202ENST00000596708 KRTAP16-1A8MUX0 517 aa5.29□□□□□ -1.56
CHMP2A-202ENST00000596708 GHRHP01286 108 aa5.29□□□□□ -1.56
CHMP2A-202ENST00000596708 FAM218AQ96MZ4 157 aa5.29□□□□□ -1.56
CHMP2A-202ENST00000596708 IGKV4-1P06312 121 aa5.28□□□□□ -1.56
CHMP2A-202ENST00000596708 COX8AP10176 69 aa5.28□□□□□ -1.56
CHMP2A-202ENST00000596708 KRTAP10-10P60014 251 aa5.27□□□□□ -1.57
CHMP2A-202ENST00000596708 A0A1W2PNM2 257 aa5.26□□□□□ -1.57
CHMP2A-202ENST00000596708 LCE2BO14633 110 aa5.26□□□□□ -1.57
CHMP2A-202ENST00000596708 MT1FP04733 61 aa5.26□□□□□ -1.57
CHMP2A-202ENST00000596708 KRTAP19-1Q8IUB9 90 aa5.26□□□□□ -1.57
CHMP2A-202ENST00000596708 A0A0B4J2C4 111 aa5.25□□□□□ -1.57
CHMP2A-202ENST00000596708 A0A1B0GX51 115 aa5.25□□□□□ -1.57
CHMP2A-202ENST00000596708 S100A6P06703 90 aa5.25□□□□□ -1.57
CHMP2A-202ENST00000596708 HRES1P13985 223 aa5.25□□□□□ -1.57
CHMP2A-202ENST00000596708 DLEU1O43261 78 aa5.24□□□□□ -1.57
CHMP2A-202ENST00000596708 ANKRD29Q8N6D5 301 aa5.24□□□□□ -1.57
CHMP2A-202ENST00000596708 FCGBPQ9Y6R7 5405 aaPredicted RBP5.24□□□□□ -1.57
CHMP2A-202ENST00000596708 A0A1B0GV72 72 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 DEFB116Q30KQ4 102 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 NOTCH2NLQ7Z3S9 236 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 MPLKIPQ8TAP9 179 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 C14orf144Q96I85 54 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 KRTAP9-3Q9BYQ3 159 aa5.23□□□□□ -1.57
CHMP2A-202ENST00000596708 IGHV6-1A0A0B4J1U7 121 aa5.22□□□□□ -1.57
CHMP2A-202ENST00000596708 TRBV7-4A0A0J9YYF1 115 aa5.21□□□□□ -1.58
CHMP2A-202ENST00000596708 MTURNQ8N3F0 131 aa5.21□□□□□ -1.58
CHMP2A-202ENST00000596708 HIGD1BQ9P298 99 aa5.21□□□□□ -1.58
CHMP2A-202ENST00000596708 PRO1854Q9UHT4 67 aa5.21□□□□□ -1.58
CHMP2A-202ENST00000596708 DNAL4O96015 105 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 SPATA45Q537H7 98 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 CEND1Q8N111 149 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 LINC00472Q9H8W2 130 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 ORMDL1Q9P0S3 153 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 PAM16Q9Y3D7 125 aa5.19□□□□□ -1.58
CHMP2A-202ENST00000596708 TMEM238LA0A1B0GVL6 79 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 A6NJY4 79 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 TRIAP1O43715 76 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 TRACP01848 142 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 CCKP06307 115 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 LINC00846Q9NV44 126 aa5.18□□□□□ -1.58
CHMP2A-202ENST00000596708 H3BQ85 93 aa5.17□□□□□ -1.58
CHMP2A-202ENST00000596708 C2orf91Q6ZV80 131 aa5.17□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms