RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 LCE2CQ5TA81 110 aa7.05□□□□□ -1.28
LIG1-212ENST00000596549 HIST1H4GQ99525 98 aa7.04□□□□□ -1.28
LIG1-212ENST00000596549 IGLV8-61A0A075B6I0 122 aa7.03□□□□□ -1.28
LIG1-212ENST00000596549 F8WEM9 126 aa7.03□□□□□ -1.28
LIG1-212ENST00000596549 DLEU1O43261 78 aa7.03□□□□□ -1.28
LIG1-212ENST00000596549 IGFL1Q6UW32 110 aa7.02□□□□□ -1.29
LIG1-212ENST00000596549 BVES-AS1Q5T3Y7 98 aa7.01□□□□□ -1.29
LIG1-212ENST00000596549 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.01□□□□□ -1.29
LIG1-212ENST00000596549 C2orf91Q6ZV80 131 aa7.01□□□□□ -1.29
LIG1-212ENST00000596549 CLEC2BQ92478 149 aa7.01□□□□□ -1.29
LIG1-212ENST00000596549 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
LIG1-212ENST00000596549 CRCT1Q9UGL9 99 aa7.01□□□□□ -1.29
LIG1-212ENST00000596549 CFC1BP0CG36 223 aa7□□□□□ -1.29
LIG1-212ENST00000596549 CFC1P0CG37 223 aa7□□□□□ -1.29
LIG1-212ENST00000596549 PAM16Q9Y3D7 125 aa7□□□□□ -1.29
LIG1-212ENST00000596549 TRBV7-7A0A0K0K1E9 115 aa6.99□□□□□ -1.29
LIG1-212ENST00000596549 RPL37P61927 97 aaKnown RBP6.99□□□□□ -1.29
LIG1-212ENST00000596549 SPATA45Q537H7 98 aa6.99□□□□□ -1.29
LIG1-212ENST00000596549 Q6JHZ5 121 aa6.99□□□□□ -1.29
LIG1-212ENST00000596549 TCL1BO95988 128 aa6.98□□□□□ -1.29
LIG1-212ENST00000596549 HIGD1BQ9P298 99 aa6.98□□□□□ -1.29
LIG1-212ENST00000596549 A0A0B4J2C4 111 aa6.97□□□□□ -1.29
LIG1-212ENST00000596549 OCIAD2Q56VL3 154 aa6.97□□□□□ -1.29
LIG1-212ENST00000596549 PPDPFLQ8WWR9 84 aa6.97□□□□□ -1.29
LIG1-212ENST00000596549 FAM218AQ96MZ4 157 aa6.97□□□□□ -1.29
LIG1-212ENST00000596549 FSIP2Q5CZC0 6907 aa6.97□□□□□ -1.29
LIG1-212ENST00000596549 H3BUT2 72 aa6.96□□□□□ -1.3
LIG1-212ENST00000596549 MT1HP80294 61 aa6.96□□□□□ -1.3
LIG1-212ENST00000596549 RAB37Q96AX2 223 aa6.95□□□□□ -1.3
LIG1-212ENST00000596549 VAMP8Q9BV40 100 aa6.95□□□□□ -1.3
LIG1-212ENST00000596549 LCE2DQ5TA82 110 aaPredicted RBP6.93□□□□□ -1.3
LIG1-212ENST00000596549 CEND1Q8N111 149 aa6.92□□□□□ -1.3
LIG1-212ENST00000596549 SNHG12Q9BXW3 62 aa6.92□□□□□ -1.3
LIG1-212ENST00000596549 FXYD2P54710 66 aa6.91□□□□□ -1.3
LIG1-212ENST00000596549 H0YGX0 51 aa6.89□□□□□ -1.31
LIG1-212ENST00000596549 PYY3Q5JQD4 70 aa6.88□□□□□ -1.31
LIG1-212ENST00000596549 Q6Q795 121 aa6.88□□□□□ -1.31
LIG1-212ENST00000596549 TRIAP1O43715 76 aa6.87□□□□□ -1.31
LIG1-212ENST00000596549 NDUFV3P56181 108 aaKnown RBP6.87□□□□□ -1.31
LIG1-212ENST00000596549 OBSCN-AS1Q96MR7 158 aa6.87□□□□□ -1.31
LIG1-212ENST00000596549 PRO1854Q9UHT4 67 aa6.87□□□□□ -1.31
LIG1-212ENST00000596549 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
LIG1-212ENST00000596549 A0A1B0GX51 115 aa6.86□□□□□ -1.31
LIG1-212ENST00000596549 A6NJY4 79 aa6.86□□□□□ -1.31
LIG1-212ENST00000596549 LST1O00453 97 aa6.86□□□□□ -1.31
LIG1-212ENST00000596549 Q75L30 129 aa6.84□□□□□ -1.31
LIG1-212ENST00000596549 TEN1Q86WV5 123 aa6.84□□□□□ -1.31
LIG1-212ENST00000596549 Q96NJ1 140 aa6.84□□□□□ -1.31
LIG1-212ENST00000596549 SS18L2Q9UHA2 77 aa6.84□□□□□ -1.31
LIG1-212ENST00000596549 A0A087WSZ3 146 aa6.83□□□□□ -1.32
LIG1-212ENST00000596549 K7ERJ3 54 aa6.83□□□□□ -1.32
LIG1-212ENST00000596549 LORP23490 312 aaPredicted RBP6.83□□□□□ -1.32
LIG1-212ENST00000596549 H3BMG7 143 aa6.82□□□□□ -1.32
LIG1-212ENST00000596549 SNCGO76070 127 aa6.82□□□□□ -1.32
LIG1-212ENST00000596549 HSD52Q0P140 79 aa6.82□□□□□ -1.32
LIG1-212ENST00000596549 A0A1W2PNM2 257 aa6.81□□□□□ -1.32
LIG1-212ENST00000596549 FABP2P12104 132 aa6.81□□□□□ -1.32
LIG1-212ENST00000596549 KRTAP10-6P60371 365 aaPredicted RBP6.81□□□□□ -1.32
LIG1-212ENST00000596549 FLGP20930 4061 aaPredicted RBP6.8□□□□□ -1.32
LIG1-212ENST00000596549 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
LIG1-212ENST00000596549 C20orf166-AS1Q96NR2 134 aa6.79□□□□□ -1.32
LIG1-212ENST00000596549 A0A1B0GV72 72 aa6.77□□□□□ -1.33
LIG1-212ENST00000596549 GHRHP01286 108 aa6.77□□□□□ -1.33
LIG1-212ENST00000596549 ATP11AUNQ6ZP68 121 aa6.77□□□□□ -1.33
LIG1-212ENST00000596549 A8MUU9 505 aa6.76□□□□□ -1.33
LIG1-212ENST00000596549 ORMDL1Q9P0S3 153 aa6.76□□□□□ -1.33
LIG1-212ENST00000596549 TMA7Q9Y2S6 64 aaKnown RBP6.76□□□□□ -1.33
LIG1-212ENST00000596549 DNAL4O96015 105 aa6.75□□□□□ -1.33
LIG1-212ENST00000596549 PSMB2P49721 201 aa6.75□□□□□ -1.33
LIG1-212ENST00000596549 DSCR10P59022 87 aa6.75□□□□□ -1.33
LIG1-212ENST00000596549 SIGMAR1Q99720 223 aa6.74□□□□□ -1.33
LIG1-212ENST00000596549 UQCR10Q9UDW1 63 aa6.74□□□□□ -1.33
LIG1-212ENST00000596549 TRBV7-4A0A0J9YYF1 115 aa6.73□□□□□ -1.33
LIG1-212ENST00000596549 M0R2T5 61 aa6.73□□□□□ -1.33
LIG1-212ENST00000596549 ANKRD29Q8N6D5 301 aa6.72□□□□□ -1.33
LIG1-212ENST00000596549 KRTAP16-1A8MUX0 517 aa6.71□□□□□ -1.34
LIG1-212ENST00000596549 TMEM256-PLSCR3K7ERE1 68 aa6.7□□□□□ -1.34
LIG1-212ENST00000596549 COX6CP09669 75 aa6.7□□□□□ -1.34
LIG1-212ENST00000596549 H3BQ85 93 aa6.69□□□□□ -1.34
LIG1-212ENST00000596549 IGKV4-1P06312 121 aa6.69□□□□□ -1.34
LIG1-212ENST00000596549 TRACP01848 142 aa6.68□□□□□ -1.34
LIG1-212ENST00000596549 CCKP06307 115 aa6.68□□□□□ -1.34
LIG1-212ENST00000596549 UBE2V1Q13404 147 aa6.68□□□□□ -1.34
LIG1-212ENST00000596549 NOTCH2NLQ7Z3S9 236 aa6.68□□□□□ -1.34
LIG1-212ENST00000596549 LINC00472Q9H8W2 130 aa6.68□□□□□ -1.34
LIG1-212ENST00000596549 DEFB116Q30KQ4 102 aa6.67□□□□□ -1.34
LIG1-212ENST00000596549 KRTAP9-7A8MTY7 169 aa6.66□□□□□ -1.34
LIG1-212ENST00000596549 LINC00313P59037 77 aa6.65□□□□□ -1.34
LIG1-212ENST00000596549 VPS25Q9BRG1 176 aa6.62□□□□□ -1.35
LIG1-212ENST00000596549 IGHV6-1A0A0B4J1U7 121 aa6.61□□□□□ -1.35
LIG1-212ENST00000596549 SCGB1C2P0DMR2 95 aa6.61□□□□□ -1.35
LIG1-212ENST00000596549 RBM3P98179 157 aaKnown RBP6.6□□□□□ -1.35
LIG1-212ENST00000596549 NAA38Q9BRA0 125 aaKnown RBP6.59□□□□□ -1.35
LIG1-212ENST00000596549 TRBV20-1A0A075B6N2 111 aa6.58□□□□□ -1.36
LIG1-212ENST00000596549 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
LIG1-212ENST00000596549 HRES1P13985 223 aa6.58□□□□□ -1.36
LIG1-212ENST00000596549 DSCR8Q96T75 97 aa6.58□□□□□ -1.36
LIG1-212ENST00000596549 BAALC-AS2P0C853 105 aa6.57□□□□□ -1.36
LIG1-212ENST00000596549 MPLKIPQ8TAP9 179 aa6.57□□□□□ -1.36
LIG1-212ENST00000596549 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms