RNA–Protein interactions for RNA: ENST00000596104.5

LIG1-209, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-209ENST00000596104 Q6ZVH6 145 aa5.06□□□□□ -1.6
LIG1-209ENST00000596104 KRTAP19-1Q8IUB9 90 aa5.06□□□□□ -1.6
LIG1-209ENST00000596104 C20orf166-AS1Q96NR2 134 aa5.06□□□□□ -1.6
LIG1-209ENST00000596104 C3orf79P0CE67 100 aa5.05□□□□□ -1.6
LIG1-209ENST00000596104 ANKRD39Q53RE8 183 aa5.05□□□□□ -1.6
LIG1-209ENST00000596104 LINC00575Q6W349 94 aa5.05□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BKO60814 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BJP06899 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BOP23527 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BBP33778 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BDP58876 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BCP62807 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST2H2BEQ16778 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 OCIAD2Q56VL3 154 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.04□□□□□ -1.6
LIG1-209ENST00000596104 Q6ZQY7 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BHQ93079 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 Q96NJ1 140 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BNQ99877 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 HIST1H2BMQ99879 126 aa5.04□□□□□ -1.6
LIG1-209ENST00000596104 A8MUU9 505 aa5.03□□□□□ -1.6
LIG1-209ENST00000596104 MT1FP04733 61 aa5.03□□□□□ -1.6
LIG1-209ENST00000596104 SLC7A5P1Q8MH63 180 aa5.03□□□□□ -1.6
LIG1-209ENST00000596104 TRBV20-1A0A075B6N2 111 aa5.02□□□□□ -1.61
LIG1-209ENST00000596104 LST1O00453 97 aa5.02□□□□□ -1.61
LIG1-209ENST00000596104 KRTAP9-3Q9BYQ3 159 aa5.02□□□□□ -1.61
LIG1-209ENST00000596104 hADV29S1A0JD25 119 aa5.01□□□□□ -1.61
LIG1-209ENST00000596104 VAMP3Q15836 100 aa5.01□□□□□ -1.61
LIG1-209ENST00000596104 KRTDAPP60985 99 aa5□□□□□ -1.61
LIG1-209ENST00000596104 ATOH7Q8N100 152 aa4.99□□□□□ -1.61
LIG1-209ENST00000596104 H3BUT2 72 aa4.98□□□□□ -1.61
LIG1-209ENST00000596104 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.98□□□□□ -1.61
LIG1-209ENST00000596104 PPDPFLQ8WWR9 84 aa4.98□□□□□ -1.61
LIG1-209ENST00000596104 KRTAP16-1A8MUX0 517 aa4.97□□□□□ -1.61
LIG1-209ENST00000596104 COA6Q5JTJ3 125 aaKnown RBP4.97□□□□□ -1.61
LIG1-209ENST00000596104 MACF1Q9UPN3 7388 aaKnown RBP4.96□□□□□ -1.61
LIG1-209ENST00000596104 SCGB1D1O95968 90 aa4.96□□□□□ -1.62
LIG1-209ENST00000596104 KRTAP10-10P60014 251 aa4.96□□□□□ -1.62
LIG1-209ENST00000596104 MPLKIPQ8TAP9 179 aa4.96□□□□□ -1.62
LIG1-209ENST00000596104 SNHG12Q9BXW3 62 aa4.96□□□□□ -1.62
LIG1-209ENST00000596104 SS18L2Q9UHA2 77 aa4.96□□□□□ -1.62
LIG1-209ENST00000596104 FAM236DA0A1B0GTK5 79 aa4.94□□□□□ -1.62
LIG1-209ENST00000596104 FAM236CP0DP71 79 aa4.94□□□□□ -1.62
LIG1-209ENST00000596104 HRES1P13985 223 aa4.94□□□□□ -1.62
LIG1-209ENST00000596104 DSCR10P59022 87 aa4.94□□□□□ -1.62
LIG1-209ENST00000596104 TEN1Q86WV5 123 aa4.93□□□□□ -1.62
LIG1-209ENST00000596104 A0A087WSZ3 146 aa4.92□□□□□ -1.62
LIG1-209ENST00000596104 BVES-AS1Q5T3Y7 98 aa4.92□□□□□ -1.62
LIG1-209ENST00000596104 SNRPEP62304 92 aaKnown RBP4.91□□□□□ -1.62
LIG1-209ENST00000596104 KRTAP19-6Q3LI70 58 aa4.91□□□□□ -1.62
LIG1-209ENST00000596104 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
LIG1-209ENST00000596104 RBM12B-AS1Q9P1G2 102 aa4.9□□□□□ -1.63
LIG1-209ENST00000596104 NDUFV3P56181 108 aaKnown RBP4.89□□□□□ -1.63
LIG1-209ENST00000596104 NOTCH2NLQ7Z3S9 236 aa4.89□□□□□ -1.63
LIG1-209ENST00000596104 C12orf57Q99622 126 aa4.89□□□□□ -1.63
LIG1-209ENST00000596104 SIGMAR1Q99720 223 aa4.88□□□□□ -1.63
LIG1-209ENST00000596104 LINC00313P59037 77 aa4.87□□□□□ -1.63
LIG1-209ENST00000596104 LINC00846Q9NV44 126 aa4.87□□□□□ -1.63
LIG1-209ENST00000596104 A0A1W2PNM2 257 aa4.86□□□□□ -1.63
LIG1-209ENST00000596104 FAM218AQ96MZ4 157 aa4.86□□□□□ -1.63
LIG1-209ENST00000596104 H3BMG7 143 aa4.85□□□□□ -1.63
LIG1-209ENST00000596104 IGKV4-1P06312 121 aa4.83□□□□□ -1.64
LIG1-209ENST00000596104 KRTAP6-3Q3LI67 103 aa4.83□□□□□ -1.64
LIG1-209ENST00000596104 HIST1H4GQ99525 98 aa4.83□□□□□ -1.64
LIG1-209ENST00000596104 HSBP1L1C9JCN9 74 aa4.82□□□□□ -1.64
LIG1-209ENST00000596104 H0YGX0 51 aa4.82□□□□□ -1.64
LIG1-209ENST00000596104 SNCGO76070 127 aa4.81□□□□□ -1.64
LIG1-209ENST00000596104 HIST1H2BLQ99880 126 aa4.81□□□□□ -1.64
LIG1-209ENST00000596104 TRBV7-4A0A0J9YYF1 115 aa4.8□□□□□ -1.64
LIG1-209ENST00000596104 FABP2P12104 132 aa4.8□□□□□ -1.64
LIG1-209ENST00000596104 HIST3H2BBQ8N257 126 aa4.8□□□□□ -1.64
LIG1-209ENST00000596104 LINC00472Q9H8W2 130 aa4.8□□□□□ -1.64
LIG1-209ENST00000596104 A0A1B0GX51 115 aa4.79□□□□□ -1.64
LIG1-209ENST00000596104 DEFB116Q30KQ4 102 aa4.79□□□□□ -1.64
LIG1-209ENST00000596104 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
LIG1-209ENST00000596104 IGHV6-1A0A0B4J1U7 121 aa4.78□□□□□ -1.64
LIG1-209ENST00000596104 A0A0B4J2C4 111 aa4.78□□□□□ -1.64
LIG1-209ENST00000596104 GHRHP01286 108 aa4.78□□□□□ -1.64
LIG1-209ENST00000596104 COX8AP10176 69 aa4.78□□□□□ -1.64
LIG1-209ENST00000596104 RAB37Q96AX2 223 aa4.78□□□□□ -1.64
LIG1-209ENST00000596104 A8MWP4 228 aa4.77□□□□□ -1.65
LIG1-209ENST00000596104 SPINK7P58062 85 aa4.77□□□□□ -1.65
LIG1-209ENST00000596104 ANKRD29Q8N6D5 301 aa4.77□□□□□ -1.65
LIG1-209ENST00000596104 DLEU1O43261 78 aa4.76□□□□□ -1.65
LIG1-209ENST00000596104 ZCCHC13Q8WW36 166 aaKnown RBP4.76□□□□□ -1.65
LIG1-209ENST00000596104 C8orf87E5RJ46 101 aa4.75□□□□□ -1.65
LIG1-209ENST00000596104 S100A2P29034 98 aa4.75□□□□□ -1.65
LIG1-209ENST00000596104 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
LIG1-209ENST00000596104 A0A1B0GV72 72 aa4.73□□□□□ -1.65
LIG1-209ENST00000596104 A0A1B0GVX0 72 aa4.73□□□□□ -1.65
LIG1-209ENST00000596104 HIGD1BQ9P298 99 aa4.73□□□□□ -1.65
LIG1-209ENST00000596104 TRIAP1O43715 76 aa4.72□□□□□ -1.65
LIG1-209ENST00000596104 TRACP01848 142 aa4.72□□□□□ -1.65
LIG1-209ENST00000596104 CCKP06307 115 aa4.72□□□□□ -1.65
LIG1-209ENST00000596104 PRO1854Q9UHT4 67 aa4.72□□□□□ -1.65
LIG1-209ENST00000596104 C2orf91Q6ZV80 131 aa4.71□□□□□ -1.66
LIG1-209ENST00000596104 WFDC13Q8IUB5 93 aa4.71□□□□□ -1.66
LIG1-209ENST00000596104 C14orf144Q96I85 54 aa4.71□□□□□ -1.66
LIG1-209ENST00000596104 ORMDL1Q9P0S3 153 aa4.7□□□□□ -1.66
LIG1-209ENST00000596104 H3BQ85 93 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms