RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.39□□□□□ -0.75
LIG1-206ENST00000594067 IGFL1Q6UW32 110 aa10.39□□□□□ -0.75
LIG1-206ENST00000594067 C1orf64Q8NEQ6 169 aa10.38□□□□□ -0.75
LIG1-206ENST00000594067 C16orf90A8MZG2 172 aa10.38□□□□□ -0.75
LIG1-206ENST00000594067 COL6A5A8TX70 2615 aa10.37□□□□□ -0.75
LIG1-206ENST00000594067 PSCAO43653 123 aa10.37□□□□□ -0.75
LIG1-206ENST00000594067 DEFB116Q30KQ4 102 aa10.37□□□□□ -0.75
LIG1-206ENST00000594067 HCG22E2RYF7 251 aa10.37□□□□□ -0.75
LIG1-206ENST00000594067 LRCOL1A6NCL2 159 aa10.36□□□□□ -0.75
LIG1-206ENST00000594067 DNAH9Q9NYC9 4486 aa10.36□□□□□ -0.75
LIG1-206ENST00000594067 CNBPP62633 177 aaKnown RBP10.34□□□□□ -0.75
LIG1-206ENST00000594067 CHTF8P0CG12 524 aa10.33□□□□□ -0.76
LIG1-206ENST00000594067 A0A087WSZ3 146 aa10.32□□□□□ -0.76
LIG1-206ENST00000594067 PHF5AQ7RTV0 110 aaKnown RBP10.32□□□□□ -0.76
LIG1-206ENST00000594067 KRTAP11-1Q8IUC1 163 aa10.32□□□□□ -0.76
LIG1-206ENST00000594067 UBE2DNLQ8IWF7 75 aa10.31□□□□□ -0.76
LIG1-206ENST00000594067 Q1T7F1 81 aa10.3□□□□□ -0.76
LIG1-206ENST00000594067 UBE2AP49459 152 aa10.3□□□□□ -0.76
LIG1-206ENST00000594067 CYP4F30PQ9H0H9 118 aa10.3□□□□□ -0.76
LIG1-206ENST00000594067 PRR4Q16378 134 aa10.29□□□□□ -0.76
LIG1-206ENST00000594067 IGLV8-61A0A075B6I0 122 aa10.28□□□□□ -0.76
LIG1-206ENST00000594067 WFDC13Q8IUB5 93 aa10.28□□□□□ -0.76
LIG1-206ENST00000594067 STAB2Q8WWQ8 2551 aa10.27□□□□□ -0.77
LIG1-206ENST00000594067 MGAM2Q2M2H8 2515 aa10.27□□□□□ -0.77
LIG1-206ENST00000594067 RPL37AP61513 92 aaKnown RBP10.27□□□□□ -0.77
LIG1-206ENST00000594067 APLNQ9ULZ1 77 aa10.25□□□□□ -0.77
LIG1-206ENST00000594067 CSMD3Q7Z407 3707 aa10.25□□□□□ -0.77
LIG1-206ENST00000594067 SRRM2Q9UQ35 2752 aaKnown RBP10.24□□□□□ -0.77
LIG1-206ENST00000594067 C1orf195Q5TG92 126 aa10.24□□□□□ -0.77
LIG1-206ENST00000594067 NDUFB1O75438 58 aa10.23□□□□□ -0.77
LIG1-206ENST00000594067 COL7A1Q02388 2944 aa10.23□□□□□ -0.77
LIG1-206ENST00000594067 KRTAP29-1A8MX34 341 aaPredicted RBP10.23□□□□□ -0.77
LIG1-206ENST00000594067 C14orf177Q52M58 125 aa10.22□□□□□ -0.77
LIG1-206ENST00000594067 TRAV22A0A0B4J277 110 aa10.21□□□□□ -0.77
LIG1-206ENST00000594067 MP68P56378 58 aa10.21□□□□□ -0.77
LIG1-206ENST00000594067 LINC00208Q96KT6 92 aa10.2□□□□□ -0.78
LIG1-206ENST00000594067 DNAH7Q8WXX0 4024 aa10.2□□□□□ -0.78
LIG1-206ENST00000594067 PSPHP1O15172 72 aa10.2□□□□□ -0.78
LIG1-206ENST00000594067 C9orf163Q8N9P6 203 aa10.19□□□□□ -0.78
LIG1-206ENST00000594067 SPRR1BP22528 89 aa10.18□□□□□ -0.78
LIG1-206ENST00000594067 H0Y9J4 135 aa10.18□□□□□ -0.78
LIG1-206ENST00000594067 PRR15Q8IV56 129 aa10.17□□□□□ -0.78
LIG1-206ENST00000594067 PANO1I0J062 215 aa10.17□□□□□ -0.78
LIG1-206ENST00000594067 TENM2Q9NT68 2774 aa10.16□□□□□ -0.78
LIG1-206ENST00000594067 DYNC2H1Q8NCM8 4307 aaKnown RBP10.15□□□□□ -0.78
LIG1-206ENST00000594067 CASC2Q6XLA1 102 aa10.15□□□□□ -0.78
LIG1-206ENST00000594067 B9D2Q9BPU9 175 aa10.15□□□□□ -0.78
LIG1-206ENST00000594067 PLECQ15149 4684 aaKnown RBP10.15□□□□□ -0.78
LIG1-206ENST00000594067 H0Y9P7 68 aa10.14□□□□□ -0.79
LIG1-206ENST00000594067 LINC00472Q9H8W2 130 aa10.13□□□□□ -0.79
LIG1-206ENST00000594067 NBDYA0A0U1RRE5 68 aa10.12□□□□□ -0.79
LIG1-206ENST00000594067 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
LIG1-206ENST00000594067 A8MUN3 132 aa10.11□□□□□ -0.79
LIG1-206ENST00000594067 A8MWP4 228 aa10.11□□□□□ -0.79
LIG1-206ENST00000594067 H3BPC8 53 aa10.11□□□□□ -0.79
LIG1-206ENST00000594067 V9GYY9 64 aa10.09□□□□□ -0.79
LIG1-206ENST00000594067 MDFIQ99750 246 aa10.08□□□□□ -0.8
LIG1-206ENST00000594067 Q6ZRN7 208 aaPredicted RBP10.08□□□□□ -0.8
LIG1-206ENST00000594067 KRTAP13-1Q8IUC0 172 aa10.08□□□□□ -0.8
LIG1-206ENST00000594067 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.06□□□□□ -0.8
LIG1-206ENST00000594067 Q5VV11 94 aa10.06□□□□□ -0.8
LIG1-206ENST00000594067 IGLV9-49A0A0B4J1Y8 123 aa10.05□□□□□ -0.8
LIG1-206ENST00000594067 Q8N9P0 234 aaPredicted RBP10.04□□□□□ -0.8
LIG1-206ENST00000594067 MMP24-AS1A0A0U1RRL7 71 aa10.02□□□□□ -0.8
LIG1-206ENST00000594067 A8MU10 97 aa10.01□□□□□ -0.81
LIG1-206ENST00000594067 SPACA4Q8TDM5 124 aa10.01□□□□□ -0.81
LIG1-206ENST00000594067 NUPR2A6NF83 97 aa10□□□□□ -0.81
LIG1-206ENST00000594067 PMAIP1Q13794 54 aa10□□□□□ -0.81
LIG1-206ENST00000594067 LIMD2Q9BT23 127 aa9.99□□□□□ -0.81
LIG1-206ENST00000594067 Q96NJ1 140 aa9.97□□□□□ -0.81
LIG1-206ENST00000594067 STARD9Q9P2P6 4700 aa9.96□□□□□ -0.82
LIG1-206ENST00000594067 IGLV7-46A0A075B6I9 117 aa9.96□□□□□ -0.82
LIG1-206ENST00000594067 VPS13DQ5THJ4 4388 aa9.95□□□□□ -0.82
LIG1-206ENST00000594067 A0A087WTM6 91 aa9.95□□□□□ -0.82
LIG1-206ENST00000594067 CHKB-CPT1BH3BT56 60 aa9.94□□□□□ -0.82
LIG1-206ENST00000594067 COA5Q86WW8 74 aa9.94□□□□□ -0.82
LIG1-206ENST00000594067 SEC61GP60059 68 aa9.93□□□□□ -0.82
LIG1-206ENST00000594067 MOBPQ13875 183 aa9.93□□□□□ -0.82
LIG1-206ENST00000594067 ASB16-AS1Q495Z4 193 aa9.93□□□□□ -0.82
LIG1-206ENST00000594067 PRR15LQ9BU68 103 aa9.93□□□□□ -0.82
LIG1-206ENST00000594067 ANAPC11Q9NYG5 84 aa9.93□□□□□ -0.82
LIG1-206ENST00000594067 LINC00483Q53H64 154 aa9.92□□□□□ -0.82
LIG1-206ENST00000594067 PSORS1C2Q9UIG4 136 aa9.92□□□□□ -0.82
LIG1-206ENST00000594067 HECTD4Q9Y4D8 3996 aa9.91□□□□□ -0.82
LIG1-206ENST00000594067 RTL8CO15255 209 aa9.9□□□□□ -0.82
LIG1-206ENST00000594067 PCOTHQ58A44 107 aa9.9□□□□□ -0.82
LIG1-206ENST00000594067 WWC2-AS2Q96NR7 200 aa9.89□□□□□ -0.83
LIG1-206ENST00000594067 DNAH8Q96JB1 4490 aa9.89□□□□□ -0.83
LIG1-206ENST00000594067 FRAS1Q86XX4 4008 aa9.89□□□□□ -0.83
LIG1-206ENST00000594067 C8orf17Q9NRJ1 99 aa9.89□□□□□ -0.83
LIG1-206ENST00000594067 TP53AIP1Q9HCN2 124 aa9.89□□□□□ -0.83
LIG1-206ENST00000594067 IGLV5-52A0A0A0MRZ9 124 aa9.88□□□□□ -0.83
LIG1-206ENST00000594067 IGHV6-1A0A0B4J1U7 121 aa9.88□□□□□ -0.83
LIG1-206ENST00000594067 CD164Q04900 197 aa9.88□□□□□ -0.83
LIG1-206ENST00000594067 LOC101927531A0A1B0GV80 90 aa9.88□□□□□ -0.83
LIG1-206ENST00000594067 ZNF706Q9Y5V0 76 aaPredicted RBP9.88□□□□□ -0.83
LIG1-206ENST00000594067 Q6ZR54 194 aa9.86□□□□□ -0.83
LIG1-206ENST00000594067 Q75L30 129 aa9.86□□□□□ -0.83
LIG1-206ENST00000594067 DNAH2Q9P225 4427 aa9.86□□□□□ -0.83
LIG1-206ENST00000594067 LCA10Q71F78 164 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms