RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 SMIM20Q8N5G0 67 aa4.74□□□□□ -1.65
SMAD4-215ENST00000592911 PPDPFLQ8WWR9 84 aa4.74□□□□□ -1.65
SMAD4-215ENST00000592911 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
SMAD4-215ENST00000592911 KRTAP4-16G5E9R7 235 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-215ENST00000592911 M0R2T5 61 aa4.73□□□□□ -1.65
SMAD4-215ENST00000592911 MOBPQ13875 183 aa4.73□□□□□ -1.65
SMAD4-215ENST00000592911 SMCR5Q8TEV8 140 aa4.73□□□□□ -1.65
SMAD4-215ENST00000592911 LIMD2Q9BT23 127 aa4.73□□□□□ -1.65
SMAD4-215ENST00000592911 A0A1B0GWB2 263 aa4.72□□□□□ -1.65
SMAD4-215ENST00000592911 ETDBQ3ZM63 59 aa4.72□□□□□ -1.65
SMAD4-215ENST00000592911 PCOTHQ58A44 107 aa4.72□□□□□ -1.65
SMAD4-215ENST00000592911 CFC1P0CG37 223 aa4.71□□□□□ -1.66
SMAD4-215ENST00000592911 IFITM1P13164 125 aa4.71□□□□□ -1.66
SMAD4-215ENST00000592911 NDUFV3P56181 108 aaKnown RBP4.71□□□□□ -1.66
SMAD4-215ENST00000592911 RAB37Q96AX2 223 aa4.71□□□□□ -1.66
SMAD4-215ENST00000592911 PRO0461Q9UI25 63 aa4.71□□□□□ -1.66
SMAD4-215ENST00000592911 TRBV20-1A0A075B6N2 111 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 GAGE2AQ6NT46 116 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 CEND1Q8N111 149 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 Q8NDZ9 215 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 OR13C6PQ8NH95 151 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 URB1-AS1Q96HZ7 61 aa4.7□□□□□ -1.66
SMAD4-215ENST00000592911 ZNF625Q96I27 306 aaPredicted RBP4.7□□□□□ -1.66
SMAD4-215ENST00000592911 IGLV9-49A0A0B4J1Y8 123 aa4.69□□□□□ -1.66
SMAD4-215ENST00000592911 A0A1B0GX51 115 aa4.69□□□□□ -1.66
SMAD4-215ENST00000592911 SNCGO76070 127 aa4.69□□□□□ -1.66
SMAD4-215ENST00000592911 MT-ATP8P03928 68 aa4.69□□□□□ -1.66
SMAD4-215ENST00000592911 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
SMAD4-215ENST00000592911 RPS28P62857 69 aaKnown RBP4.69□□□□□ -1.66
SMAD4-215ENST00000592911 TEN1Q86WV5 123 aa4.69□□□□□ -1.66
SMAD4-215ENST00000592911 COX6B2Q6YFQ2 88 aa4.68□□□□□ -1.66
SMAD4-215ENST00000592911 TRBV10-2A0A0K0K1G8 114 aa4.67□□□□□ -1.66
SMAD4-215ENST00000592911 LINC00158P58513 81 aa4.67□□□□□ -1.66
SMAD4-215ENST00000592911 Q6ZRX8 168 aa4.67□□□□□ -1.66
SMAD4-215ENST00000592911 LOC107984156A0A0G2JMH3 177 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 J3KT08 172 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 HBDP02042 147 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 SCGB1C2P0DMR2 95 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 FXYD2P54710 66 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 ARL17AQ8IVW1 177 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 IFI27L1Q96BM0 104 aa4.66□□□□□ -1.66
SMAD4-215ENST00000592911 NAA38Q9BRA0 125 aaKnown RBP4.66□□□□□ -1.66
SMAD4-215ENST00000592911 NHP2Q9NX24 153 aaKnown RBP4.66□□□□□ -1.66
SMAD4-215ENST00000592911 TRBV10-3A0A0K0K1G6 114 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 A4D1N5 150 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 CD164Q04900 197 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 MEIG1Q5JSS6 88 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 C9orf153Q5TBE3 101 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 Q5XG85 94 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 IMUPQ9GZP8 106 aa4.65□□□□□ -1.67
SMAD4-215ENST00000592911 IGLV6-57P01721 117 aa4.64□□□□□ -1.67
SMAD4-215ENST00000592911 NMUP48645 174 aa4.64□□□□□ -1.67
SMAD4-215ENST00000592911 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
SMAD4-215ENST00000592911 MYMXA0A1B0GTQ4 84 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 CCDC179H3BU77 68 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 ERC2-IT1O76042 136 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 DPM2O94777 84 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 SPRR1BP22528 89 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 Q9BRP9 147 aa4.63□□□□□ -1.67
SMAD4-215ENST00000592911 FAM240AA0A1B0GVK7 77 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 IGKCP01834 107 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 TMEM170BQ5T4T1 132 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 PCP2Q8IVA1 136 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 HIST1H4GQ99525 98 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 SSPOA2VEC9 5147 aa4.62□□□□□ -1.67
SMAD4-215ENST00000592911 C9orf92A6NGG3 77 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 C11orf86A6NJI1 115 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 NCR3O14931 201 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 PLNP26678 52 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 MIR7-3HGQ8N6C7 128 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 USH2AO75445 5202 aa4.61□□□□□ -1.67
SMAD4-215ENST00000592911 TRBV7-7A0A0K0K1E9 115 aa4.6□□□□□ -1.67
SMAD4-215ENST00000592911 UQCRQO14949 82 aa4.6□□□□□ -1.67
SMAD4-215ENST00000592911 NDUFC2O95298 119 aa4.6□□□□□ -1.67
SMAD4-215ENST00000592911 ACYP1P07311 99 aa4.6□□□□□ -1.67
SMAD4-215ENST00000592911 FCGBPQ9Y6R7 5405 aaPredicted RBP4.6□□□□□ -1.67
SMAD4-215ENST00000592911 TMEM223A0PJW6 202 aa4.59□□□□□ -1.67
SMAD4-215ENST00000592911 C9JAW5 83 aa4.59□□□□□ -1.67
SMAD4-215ENST00000592911 K7ERJ3 54 aa4.59□□□□□ -1.67
SMAD4-215ENST00000592911 PSMB2P49721 201 aa4.59□□□□□ -1.67
SMAD4-215ENST00000592911 A0A096LNJ9 63 aa4.58□□□□□ -1.68
SMAD4-215ENST00000592911 TRAV12-1A0A0B4J245 112 aa4.58□□□□□ -1.68
SMAD4-215ENST00000592911 LAMTOR3Q9UHA4 124 aa4.58□□□□□ -1.68
SMAD4-215ENST00000592911 TRAV23DV6A0A075B6W5 121 aa4.57□□□□□ -1.68
SMAD4-215ENST00000592911 ANKRD29Q8N6D5 301 aa4.57□□□□□ -1.68
SMAD4-215ENST00000592911 DHRS4-AS1Q9P1J3 65 aa4.57□□□□□ -1.68
SMAD4-215ENST00000592911 A0A0U1RRA0 63 aa4.56□□□□□ -1.68
SMAD4-215ENST00000592911 ZNF73O43830 326 aaPredicted RBP4.56□□□□□ -1.68
SMAD4-215ENST00000592911 S100A7L2Q5SY68 101 aa4.56□□□□□ -1.68
SMAD4-215ENST00000592911 LINC00846Q9NV44 126 aa4.56□□□□□ -1.68
SMAD4-215ENST00000592911 H7C2G1 150 aa4.55□□□□□ -1.68
SMAD4-215ENST00000592911 TMEM258P61165 79 aa4.55□□□□□ -1.68
SMAD4-215ENST00000592911 ATXN8Q156A1 80 aa4.55□□□□□ -1.68
SMAD4-215ENST00000592911 KRTAP9-8Q9BYQ0 159 aa4.55□□□□□ -1.68
SMAD4-215ENST00000592911 H3BT86 120 aa4.54□□□□□ -1.68
SMAD4-215ENST00000592911 C1orf195Q5TG92 126 aa4.54□□□□□ -1.68
SMAD4-215ENST00000592911 MACF1Q9UPN3 7388 aaKnown RBP4.53□□□□□ -1.68
SMAD4-215ENST00000592911 TCL1BO95988 128 aa4.53□□□□□ -1.68
SMAD4-215ENST00000592911 HERVK_113P61574 105 aa4.53□□□□□ -1.68
SMAD4-215ENST00000592911 PRO1854Q9UHT4 67 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms