RNA–Protein interactions for RNA: ENST00000590061.1

SMAD4-210, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 544 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-210ENST00000590061 SPRR1AP35321 89 aa4.6□□□□□ -1.67
SMAD4-210ENST00000590061 C6orf99Q4VX62 202 aa4.6□□□□□ -1.67
SMAD4-210ENST00000590061 PPDPFLQ8WWR9 84 aa4.6□□□□□ -1.67
SMAD4-210ENST00000590061 FAM168BA1KXE4 195 aa4.59□□□□□ -1.67
SMAD4-210ENST00000590061 RPL37AP8A6NKH3 93 aa4.59□□□□□ -1.67
SMAD4-210ENST00000590061 KRTAP10-1P60331 282 aa4.59□□□□□ -1.67
SMAD4-210ENST00000590061 hADV29S1A0JD25 119 aa4.58□□□□□ -1.68
SMAD4-210ENST00000590061 UBE2AP49459 152 aa4.58□□□□□ -1.68
SMAD4-210ENST00000590061 ELOF1P60002 83 aaKnown RBP4.58□□□□□ -1.68
SMAD4-210ENST00000590061 Q6ZRX8 168 aa4.58□□□□□ -1.68
SMAD4-210ENST00000590061 CIRBP-AS1Q8TBR5 109 aa4.58□□□□□ -1.68
SMAD4-210ENST00000590061 ZNF706Q9Y5V0 76 aaPredicted RBP4.58□□□□□ -1.68
SMAD4-210ENST00000590061 SPCS1Q9Y6A9 102 aa4.58□□□□□ -1.68
SMAD4-210ENST00000590061 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.57□□□□□ -1.68
SMAD4-210ENST00000590061 LINC00575Q6W349 94 aa4.57□□□□□ -1.68
SMAD4-210ENST00000590061 SCXQ7RTU7 201 aa4.57□□□□□ -1.68
SMAD4-210ENST00000590061 PHF5AQ7RTV0 110 aaKnown RBP4.57□□□□□ -1.68
SMAD4-210ENST00000590061 PCLOQ9Y6V0 5065 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 TMEM256-PLSCR3K7ERE1 68 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 LST1O00453 97 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 KRTAP7-1Q8IUC3 87 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 Q8NDZ9 215 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 FAT2Q9NYQ8 4349 aa4.56□□□□□ -1.68
SMAD4-210ENST00000590061 F8W1H4 67 aa4.55□□□□□ -1.68
SMAD4-210ENST00000590061 K7EP34 96 aa4.55□□□□□ -1.68
SMAD4-210ENST00000590061 LCE1AQ5T7P2 110 aa4.55□□□□□ -1.68
SMAD4-210ENST00000590061 ORMDL1Q9P0S3 153 aa4.55□□□□□ -1.68
SMAD4-210ENST00000590061 KRTAP4-16G5E9R7 235 aaPredicted RBP4.54□□□□□ -1.68
SMAD4-210ENST00000590061 H3BT86 120 aa4.54□□□□□ -1.68
SMAD4-210ENST00000590061 PANO1I0J062 215 aa4.54□□□□□ -1.68
SMAD4-210ENST00000590061 ZNF861PO60384 105 aa4.54□□□□□ -1.68
SMAD4-210ENST00000590061 C1orf137Q5JT78 98 aa4.54□□□□□ -1.68
SMAD4-210ENST00000590061 PSORS1C2Q9UIG4 136 aa4.54□□□□□ -1.68
SMAD4-210ENST00000590061 PKD1P98161 4303 aa4.53□□□□□ -1.68
SMAD4-210ENST00000590061 DNAH11Q96DT5 4516 aa4.53□□□□□ -1.68
SMAD4-210ENST00000590061 NDUFS5O43920 106 aa4.53□□□□□ -1.68
SMAD4-210ENST00000590061 KIAA1109Q2LD37 5005 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 TEX49A0A1B0GTD5 131 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 JMJD7-PLA2G4BH0Y9G9 81 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 TCL1BO95988 128 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 IGLV7-43P04211 117 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 PDE6GP18545 87 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 FUSP35637 526 aaKnown RBP eCLIP4.52□□□□□ -1.69
SMAD4-210ENST00000590061 RPL37AP61513 92 aaKnown RBP4.52□□□□□ -1.69
SMAD4-210ENST00000590061 IMUPQ9GZP8 106 aa4.52□□□□□ -1.69
SMAD4-210ENST00000590061 F8WEM9 126 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 H3BMG7 143 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 BAALC-AS2P0C853 105 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 SPINK6Q6UWN8 80 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 HRCT1Q6UXD1 115 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 Q8N9P0 234 aaPredicted RBP4.51□□□□□ -1.69
SMAD4-210ENST00000590061 CLEC2BQ92478 149 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 LINC01600Q96MT4 127 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 NAA38Q9BRA0 125 aaKnown RBP4.51□□□□□ -1.69
SMAD4-210ENST00000590061 HIGD2AQ9BW72 106 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
SMAD4-210ENST00000590061 Q6ZQY7 126 aa4.5□□□□□ -1.69
SMAD4-210ENST00000590061 KRTAP13-1Q8IUC0 172 aa4.5□□□□□ -1.69
SMAD4-210ENST00000590061 SMCR5Q8TEV8 140 aa4.5□□□□□ -1.69
SMAD4-210ENST00000590061 IGLV5-48A0A075B6I7 105 aa4.49□□□□□ -1.69
SMAD4-210ENST00000590061 DNAH5Q8TE73 4624 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 KRTAP29-1A8MX34 341 aaPredicted RBP4.48□□□□□ -1.69
SMAD4-210ENST00000590061 SPRR1BP22528 89 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 PRLHP81277 87 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 FAM229BQ4G0N7 80 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 Q6Q795 121 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 Q9BRP9 147 aa4.48□□□□□ -1.69
SMAD4-210ENST00000590061 DNAH8Q96JB1 4490 aa4.47□□□□□ -1.69
SMAD4-210ENST00000590061 A0A1B0GW54 56 aa4.47□□□□□ -1.69
SMAD4-210ENST00000590061 C8orf87E5RJ46 101 aa4.47□□□□□ -1.69
SMAD4-210ENST00000590061 Q6JHZ5 121 aa4.47□□□□□ -1.69
SMAD4-210ENST00000590061 FAM218AQ96MZ4 157 aa4.47□□□□□ -1.69
SMAD4-210ENST00000590061 IGLV9-49A0A0B4J1Y8 123 aa4.46□□□□□ -1.7
SMAD4-210ENST00000590061 RBM3P98179 157 aaKnown RBP4.46□□□□□ -1.7
SMAD4-210ENST00000590061 LINC00483Q53H64 154 aa4.46□□□□□ -1.7
SMAD4-210ENST00000590061 NOTCH2NLQ7Z3S9 236 aa4.46□□□□□ -1.7
SMAD4-210ENST00000590061 DSCR8Q96T75 97 aa4.46□□□□□ -1.7
SMAD4-210ENST00000590061 LRP1BQ9NZR2 4599 aa4.46□□□□□ -1.7
SMAD4-210ENST00000590061 DYNC1H1Q14204 4646 aaKnown RBP4.45□□□□□ -1.7
SMAD4-210ENST00000590061 RYR1P21817 5038 aa4.45□□□□□ -1.7
SMAD4-210ENST00000590061 NDUFV3P56181 108 aaKnown RBP4.45□□□□□ -1.7
SMAD4-210ENST00000590061 TEN1Q86WV5 123 aa4.45□□□□□ -1.7
SMAD4-210ENST00000590061 DEFB105AQ8NG35 78 aa4.45□□□□□ -1.7
SMAD4-210ENST00000590061 SPRR4Q96PI1 79 aa4.45□□□□□ -1.7
SMAD4-210ENST00000590061 PSPHP1O15172 72 aa4.44□□□□□ -1.7
SMAD4-210ENST00000590061 CRYGAP11844 174 aa4.44□□□□□ -1.7
SMAD4-210ENST00000590061 MP68P56378 58 aa4.44□□□□□ -1.7
SMAD4-210ENST00000590061 TMEM258P61165 79 aa4.44□□□□□ -1.7
SMAD4-210ENST00000590061 KRTAP11-1Q8IUC1 163 aa4.44□□□□□ -1.7
SMAD4-210ENST00000590061 SSBP3-AS1Q7Z2R9 100 aa4.43□□□□□ -1.7
SMAD4-210ENST00000590061 PRR15Q8IV56 129 aa4.43□□□□□ -1.7
SMAD4-210ENST00000590061 Q8N377 158 aa4.43□□□□□ -1.7
SMAD4-210ENST00000590061 RBM12B-AS1Q9P1G2 102 aa4.43□□□□□ -1.7
SMAD4-210ENST00000590061 IGLV8-61A0A075B6I0 122 aa4.42□□□□□ -1.7
SMAD4-210ENST00000590061 LOC110117498A0A087WWA1 95 aa4.42□□□□□ -1.7
SMAD4-210ENST00000590061 ERC2-IT1O76042 136 aa4.42□□□□□ -1.7
SMAD4-210ENST00000590061 SMR3BP02814 79 aaPredicted RBP4.42□□□□□ -1.7
SMAD4-210ENST00000590061 ACYP1P07311 99 aa4.42□□□□□ -1.7
SMAD4-210ENST00000590061 PRO0461Q9UI25 63 aa4.42□□□□□ -1.7
SMAD4-210ENST00000590061 ABCA13Q86UQ4 5058 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms