RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 S100A8P05109 93 aa2.31□□□□□ -2.04
VMP1-208ENST00000588617 IFITM1P13164 125 aa2.31□□□□□ -2.04
VMP1-208ENST00000588617 TNCP24821 2201 aa2.31□□□□□ -2.04
VMP1-208ENST00000588617 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.31□□□□□ -2.044e-18■■■■■ 97.3
VMP1-208ENST00000588617 NAV3Q8IVL0 2385 aa2.31□□□□□ -2.04
VMP1-208ENST00000588617 ABCA2Q9BZC7 2435 aa2.3□□□□□ -2.04
VMP1-208ENST00000588617 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa2.3□□□□□ -2.04
VMP1-208ENST00000588617 CNFNQ9BYD5 112 aa2.3□□□□□ -2.04
VMP1-208ENST00000588617 FLNAP21333 2647 aaKnown RBP2.3□□□□□ -2.04
VMP1-208ENST00000588617 CUBNO60494 3623 aa2.3□□□□□ -2.04
VMP1-208ENST00000588617 HECTD1Q9ULT8 2610 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 DOCK11Q5JSL3 2073 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 M0R3E3 92 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 SMIM6P0DI80 62 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 Q0VG73 95 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 RHPN1-AS1Q9BWJ2 59 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 NF1P21359 2839 aa2.29□□□□□ -2.04
VMP1-208ENST00000588617 MYO9AB2RTY4 2548 aa2.28□□□□□ -2.04
VMP1-208ENST00000588617 CCDC168Q8NDH2 2452 aa2.28□□□□□ -2.04
VMP1-208ENST00000588617 A0A1B0GUT8 65 aa2.28□□□□□ -2.04
VMP1-208ENST00000588617 F2Z2F3 143 aa2.28□□□□□ -2.04
VMP1-208ENST00000588617 RPL37P61927 97 aaKnown RBP2.28□□□□□ -2.04
VMP1-208ENST00000588617 HSD52Q0P140 79 aa2.28□□□□□ -2.04
VMP1-208ENST00000588617 NSD1Q96L73 2696 aaPredicted RBP2.27□□□□□ -2.05
VMP1-208ENST00000588617 NIPBLQ6KC79 2804 aaeCLIP2.27□□□□□ -2.05
VMP1-208ENST00000588617 TRAV21A0A0B4J279 112 aa2.27□□□□□ -2.05
VMP1-208ENST00000588617 A8MTW9 85 aa2.27□□□□□ -2.05
VMP1-208ENST00000588617 CRIP1P50238 77 aa2.27□□□□□ -2.05
VMP1-208ENST00000588617 TDRG1Q3Y452 100 aa2.27□□□□□ -2.05
VMP1-208ENST00000588617 FASNP49327 2511 aaKnown RBP2.27□□□□□ -2.05
VMP1-208ENST00000588617 MED13LQ71F56 2210 aa2.26□□□□□ -2.05
VMP1-208ENST00000588617 KRTAP21-2Q3LI59 83 aa2.26□□□□□ -2.05
VMP1-208ENST00000588617 WNK2Q9Y3S1 2297 aa2.26□□□□□ -2.05
VMP1-208ENST00000588617 LINC01549A6NIU2 74 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 K7EMI3 77 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 PPP1R17O96001 155 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 SPINK8P0C7L1 97 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 ARMS2P0C7Q2 107 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 ASIPP42127 132 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 DEFB114Q30KQ6 69 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 BAGE3Q86Y29 109 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 C18orf32Q8TCD1 76 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 ABCA1O95477 2261 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 HIVEP1P15822 2718 aa2.25□□□□□ -2.05
VMP1-208ENST00000588617 CSPG4Q6UVK1 2322 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 ANK2Q01484 3957 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 TLN2Q9Y4G6 2542 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 DOPEY2Q9Y3R5 2298 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 ATP5EP56381 51 aaPredicted RBP2.24□□□□□ -2.05
VMP1-208ENST00000588617 PYY3Q5JQD4 70 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 PSMG4Q5JS54 123 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 CYP4F30PQ9H0H9 118 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 NXT2Q9NPJ8 142 aaKnown RBP2.24□□□□□ -2.05
VMP1-208ENST00000588617 MTORP42345 2549 aa2.24□□□□□ -2.05
VMP1-208ENST00000588617 FLNBO75369 2602 aaKnown RBP2.23□□□□□ -2.05
VMP1-208ENST00000588617 LINC01546A6NGU7 62 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 D6R8Y8 96 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 SPINK4O60575 86 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 PMCHL1Q16048 86 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 DEFB136Q30KP8 78 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 Q96NJ1 140 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 C20orf78Q9BR46 151 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 DPH3P1Q9H4G8 78 aa2.23□□□□□ -2.05
VMP1-208ENST00000588617 DNHD1Q96M86 4753 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 H3BVH4 76 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 DEFB131AP59861 70 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 WFDC9Q8NEX5 89 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 SMR3AQ99954 134 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 ACANP16112 2415 aa2.22□□□□□ -2.05
VMP1-208ENST00000588617 SONP18583 2426 aaKnown RBP2.22□□□□□ -2.05
VMP1-208ENST00000588617 SETXQ7Z333 2677 aaKnown RBP2.21□□□□□ -2.06
VMP1-208ENST00000588617 VWFP04275 2813 aa2.21□□□□□ -2.06
VMP1-208ENST00000588617 LEPROTL1O95214 131 aa2.21□□□□□ -2.06
VMP1-208ENST00000588617 PKIAP61925 76 aa2.21□□□□□ -2.06
VMP1-208ENST00000588617 TRRAPQ9Y4A5 3859 aa2.21□□□□□ -2.06
VMP1-208ENST00000588617 TENM1Q9UKZ4 2725 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 SYS1-DBNDD2H3BUS1 97 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 C3orf79P0CE67 100 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 ACYP2P14621 99 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 FCER1GP30273 86 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 DEFB1P60022 68 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 TMEM263Q8WUH6 116 aaKnown RBP2.2□□□□□ -2.06
VMP1-208ENST00000588617 SMIM2Q9BVW6 85 aa2.2□□□□□ -2.06
VMP1-208ENST00000588617 TRGV1A0A0A0MS02 117 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 M0QY20 66 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 IFI27P40305 119 aaPredicted RBP2.19□□□□□ -2.06
VMP1-208ENST00000588617 POLR2KP53803 58 aaKnown RBP2.19□□□□□ -2.06
VMP1-208ENST00000588617 KRTDAPP60985 99 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 VAMP8Q9BV40 100 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 ST20Q9HBF5 79 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 LINC00474Q9P2X8 69 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 SETD2Q9BYW2 2564 aaPredicted RBP2.19□□□□□ -2.06
VMP1-208ENST00000588617 ATRQ13535 2644 aa2.19□□□□□ -2.06
VMP1-208ENST00000588617 C2CD3Q4AC94 2353 aa2.18□□□□□ -2.06
VMP1-208ENST00000588617 MAST4O15021 2626 aa2.18□□□□□ -2.06
VMP1-208ENST00000588617 MGPP08493 103 aa2.18□□□□□ -2.06
VMP1-208ENST00000588617 PLNP26678 52 aa2.18□□□□□ -2.06
VMP1-208ENST00000588617 CFAP126Q5VTH2 177 aa2.18□□□□□ -2.06
VMP1-208ENST00000588617 TIMM8BQ9Y5J9 83 aaPredicted RBP2.18□□□□□ -2.06
VMP1-208ENST00000588617 DNAH3Q8TD57 4116 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms