RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 ANKRD39Q53RE8 183 aa7.28□□□□□ -1.24
DNMT1-213ENST00000587604 OBSCN-AS1Q96MR7 158 aa7.28□□□□□ -1.24
DNMT1-213ENST00000587604 KRTDAPP60985 99 aa7.27□□□□□ -1.25
DNMT1-213ENST00000587604 VAMP3Q15836 100 aa7.27□□□□□ -1.25
DNMT1-213ENST00000587604 CLEC2BQ92478 149 aa7.27□□□□□ -1.25
DNMT1-213ENST00000587604 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.26□□□□□ -1.25
DNMT1-213ENST00000587604 CFC1P0CG37 223 aa7.26□□□□□ -1.25
DNMT1-213ENST00000587604 IGFL1Q6UW32 110 aa7.26□□□□□ -1.25
DNMT1-213ENST00000587604 LINC00575Q6W349 94 aa7.26□□□□□ -1.25
DNMT1-213ENST00000587604 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
DNMT1-213ENST00000587604 SLC7A5P1Q8MH63 180 aa7.25□□□□□ -1.25
DNMT1-213ENST00000587604 C20orf202A1L168 122 aa7.24□□□□□ -1.25
DNMT1-213ENST00000587604 OCIAD2Q56VL3 154 aa7.24□□□□□ -1.25
DNMT1-213ENST00000587604 Q6ZQY7 126 aa7.24□□□□□ -1.25
DNMT1-213ENST00000587604 hADV29S1A0JD25 119 aa7.23□□□□□ -1.25
DNMT1-213ENST00000587604 KRTAP9-8Q9BYQ0 159 aa7.23□□□□□ -1.25
DNMT1-213ENST00000587604 SSPOA2VEC9 5147 aa7.22□□□□□ -1.25
DNMT1-213ENST00000587604 COA6Q5JTJ3 125 aaKnown RBP7.21□□□□□ -1.26
DNMT1-213ENST00000587604 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
DNMT1-213ENST00000587604 Q96NJ1 140 aa7.21□□□□□ -1.26
DNMT1-213ENST00000587604 LST1O00453 97 aa7.2□□□□□ -1.26
DNMT1-213ENST00000587604 USH2AO75445 5202 aa7.2□□□□□ -1.26
DNMT1-213ENST00000587604 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP7.18□□□□□ -1.26
DNMT1-213ENST00000587604 PPDPFLQ8WWR9 84 aa7.18□□□□□ -1.26
DNMT1-213ENST00000587604 C20orf166-AS1Q96NR2 134 aa7.18□□□□□ -1.26
DNMT1-213ENST00000587604 TRBV20-1A0A075B6N2 111 aa7.16□□□□□ -1.26
DNMT1-213ENST00000587604 SNRPEP62304 92 aaKnown RBP7.16□□□□□ -1.26
DNMT1-213ENST00000587604 SNHG12Q9BXW3 62 aa7.16□□□□□ -1.26
DNMT1-213ENST00000587604 A8MUU9 505 aa7.15□□□□□ -1.26
DNMT1-213ENST00000587604 SCGB1D1O95968 90 aa7.15□□□□□ -1.26
DNMT1-213ENST00000587604 H3BUT2 72 aa7.13□□□□□ -1.27
DNMT1-213ENST00000587604 SS18L2Q9UHA2 77 aa7.13□□□□□ -1.27
DNMT1-213ENST00000587604 BVES-AS1Q5T3Y7 98 aa7.12□□□□□ -1.27
DNMT1-213ENST00000587604 TEN1Q86WV5 123 aa7.09□□□□□ -1.27
DNMT1-213ENST00000587604 MT2AP02795 61 aa7.08□□□□□ -1.28
DNMT1-213ENST00000587604 FCGBPQ9Y6R7 5405 aaPredicted RBP7.07□□□□□ -1.28
DNMT1-213ENST00000587604 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
DNMT1-213ENST00000587604 C12orf57Q99622 126 aa7.06□□□□□ -1.28
DNMT1-213ENST00000587604 A0A087WSZ3 146 aa7.05□□□□□ -1.28
DNMT1-213ENST00000587604 LCE2BO14633 110 aa7.04□□□□□ -1.28
DNMT1-213ENST00000587604 SNCGO76070 127 aa7.04□□□□□ -1.28
DNMT1-213ENST00000587604 DSCR10P59022 87 aa7.04□□□□□ -1.28
DNMT1-213ENST00000587604 FAM236DA0A1B0GTK5 79 aa7.03□□□□□ -1.28
DNMT1-213ENST00000587604 KRTAP16-1A8MUX0 517 aa7.03□□□□□ -1.28
DNMT1-213ENST00000587604 MT1FP04733 61 aa7.03□□□□□ -1.28
DNMT1-213ENST00000587604 FAM236CP0DP71 79 aa7.03□□□□□ -1.28
DNMT1-213ENST00000587604 NDUFV3P56181 108 aaKnown RBP7.03□□□□□ -1.28
DNMT1-213ENST00000587604 KRTAP19-1Q8IUB9 90 aa7.03□□□□□ -1.28
DNMT1-213ENST00000587604 HIST1H4GQ99525 98 aa7.02□□□□□ -1.29
DNMT1-213ENST00000587604 KRTAP9-3Q9BYQ3 159 aa7.01□□□□□ -1.29
DNMT1-213ENST00000587604 H0YGX0 51 aa7□□□□□ -1.29
DNMT1-213ENST00000587604 LINC00313P59037 77 aa7□□□□□ -1.29
DNMT1-213ENST00000587604 KRTAP10-10P60014 251 aa7□□□□□ -1.29
DNMT1-213ENST00000587604 RBM12B-AS1Q9P1G2 102 aa7□□□□□ -1.29
DNMT1-213ENST00000587604 H3BMG7 143 aa6.99□□□□□ -1.29
DNMT1-213ENST00000587604 MPLKIPQ8TAP9 179 aa6.99□□□□□ -1.29
DNMT1-213ENST00000587604 HIST1H2BLQ99880 126 aa6.99□□□□□ -1.29
DNMT1-213ENST00000587604 HIST3H2BBQ8N257 126 aa6.98□□□□□ -1.29
DNMT1-213ENST00000587604 FAM218AQ96MZ4 157 aa6.98□□□□□ -1.29
DNMT1-213ENST00000587604 SIGMAR1Q99720 223 aa6.98□□□□□ -1.29
DNMT1-213ENST00000587604 GHRHP01286 108 aa6.97□□□□□ -1.29
DNMT1-213ENST00000587604 HRES1P13985 223 aa6.97□□□□□ -1.29
DNMT1-213ENST00000587604 S100A2P29034 98 aa6.97□□□□□ -1.29
DNMT1-213ENST00000587604 SYNE2Q8WXH0 6885 aaKnown RBP6.96□□□□□ -1.29
DNMT1-213ENST00000587604 RAB37Q96AX2 223 aa6.96□□□□□ -1.3
DNMT1-213ENST00000587604 A0A1W2PNM2 257 aa6.95□□□□□ -1.3
DNMT1-213ENST00000587604 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
DNMT1-213ENST00000587604 COX8AP10176 69 aa6.94□□□□□ -1.3
DNMT1-213ENST00000587604 FABP2P12104 132 aa6.94□□□□□ -1.3
DNMT1-213ENST00000587604 MACF1Q9UPN3 7388 aaKnown RBP6.94□□□□□ -1.3
DNMT1-213ENST00000587604 A0A1B0GX51 115 aa6.93□□□□□ -1.3
DNMT1-213ENST00000587604 NOTCH2NLQ7Z3S9 236 aa6.93□□□□□ -1.3
DNMT1-213ENST00000587604 A0A0B4J2C4 111 aa6.92□□□□□ -1.3
DNMT1-213ENST00000587604 DLEU1O43261 78 aa6.92□□□□□ -1.3
DNMT1-213ENST00000587604 TRBV7-4A0A0J9YYF1 115 aa6.9□□□□□ -1.3
DNMT1-213ENST00000587604 ANKRD29Q8N6D5 301 aa6.9□□□□□ -1.3
DNMT1-213ENST00000587604 LINC00846Q9NV44 126 aa6.89□□□□□ -1.31
DNMT1-213ENST00000587604 MTURNQ8N3F0 131 aa6.88□□□□□ -1.31
DNMT1-213ENST00000587604 LINC00472Q9H8W2 130 aa6.88□□□□□ -1.31
DNMT1-213ENST00000587604 DEFB116Q30KQ4 102 aa6.87□□□□□ -1.31
DNMT1-213ENST00000587604 HIGD1BQ9P298 99 aa6.87□□□□□ -1.31
DNMT1-213ENST00000587604 IGHV6-1A0A0B4J1U7 121 aa6.86□□□□□ -1.31
DNMT1-213ENST00000587604 S100A6P06703 90 aa6.85□□□□□ -1.31
DNMT1-213ENST00000587604 C14orf144Q96I85 54 aa6.85□□□□□ -1.31
DNMT1-213ENST00000587604 PRO1854Q9UHT4 67 aa6.85□□□□□ -1.31
DNMT1-213ENST00000587604 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
DNMT1-213ENST00000587604 H3BQ85 93 aa6.83□□□□□ -1.32
DNMT1-213ENST00000587604 CCKP06307 115 aa6.82□□□□□ -1.32
DNMT1-213ENST00000587604 CEND1Q8N111 149 aa6.82□□□□□ -1.32
DNMT1-213ENST00000587604 ORMDL1Q9P0S3 153 aa6.82□□□□□ -1.32
DNMT1-213ENST00000587604 A0A1B0GV72 72 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 C8orf87E5RJ46 101 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 TRIAP1O43715 76 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 DNAL4O96015 105 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 TRACP01848 142 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 C2orf91Q6ZV80 131 aa6.81□□□□□ -1.32
DNMT1-213ENST00000587604 TMEM238LA0A1B0GVL6 79 aa6.8□□□□□ -1.32
DNMT1-213ENST00000587604 A6NJY4 79 aa6.8□□□□□ -1.32
DNMT1-213ENST00000587604 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
DNMT1-213ENST00000587604 SPINK7P58062 85 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms