RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-231	ENST00000584063	KRTAP16-1	A8MUX0	517 aa		7.55	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	C1orf134	Q5TEV5	83 aa		7.55	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063		A6NED7	52 aa		7.54	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	IGKV2D-24	A0A075B6R9	120 aa		7.54	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	MEGF8	Q7Z7M0	2845 aa		7.54	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	DNAH10	Q8IVF4	4471 aa		7.54	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	RPL37AP8	A6NKH3	93 aa		7.53	□□□□□ -1.2
CDK5RAP3-231	ENST00000584063	BPY2	O14599	106 aa		7.52	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	SRRM2	Q9UQ35	2752 aa	Known RBP	7.52	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	CDC42SE1	Q9NRR8	79 aa		7.52	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	TRBV7-4	A0A0J9YYF1	115 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	ATP5EP2	Q5VTU8	51 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	KRTAP26-1	Q6PEX3	210 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	C15orf56	Q8N910	161 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	C1orf64	Q8NEQ6	169 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	TMEM254	Q8TBM7	123 aa		7.51	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	LOC110117498	A0A087WWA1	95 aa		7.5	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	NOTCH2NL	Q7Z3S9	236 aa		7.5	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	PRKDC	P78527	4128 aa	Known RBP	7.49	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	DNAH1	Q9P2D7	4330 aa		7.49	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	FAM168B	A1KXE4	195 aa		7.49	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	ELOF1	P60002	83 aa	Known RBP	7.49	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063		A0A0G2JQZ4	141 aa		7.48	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063		A0A1W2PNN7	141 aa		7.48	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	PSCA	O43653	123 aa		7.48	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	CASC10	Q5T4H9	136 aa		7.48	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	DNAH9	Q9NYC9	4486 aa		7.48	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063		H3BNG1	76 aa		7.47	□□□□□ -1.21
CDK5RAP3-231	ENST00000584063	CYP4F30P	Q9H0H9	118 aa		7.46	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	B9D2	Q9BPU9	175 aa		7.45	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	PRR15L	Q9BU68	103 aa		7.45	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	ST20-AS1	Q8NBB2	130 aa		7.45	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	GVQW2	A0A096LPI5	108 aa	Predicted RBP	7.44	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	ROMO1	P60602	79 aa		7.44	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	NREP	Q16612	68 aa		7.44	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	CHTF8	P0CG12	524 aa		7.43	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	C7orf33	Q8WU49	177 aa		7.42	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	UBE2DNL	Q8IWF7	75 aa		7.42	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	FAM229A	H3BQW9	127 aa		7.41	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	DEFB116	Q30KQ4	102 aa		7.41	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063		Q8N377	158 aa		7.41	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	LIMD2	Q9BT23	127 aa		7.41	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	FBN3	Q75N90	2809 aa		7.4	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	LINC01556	Q5JQF7	62 aa		7.4	□□□□□ -1.22
CDK5RAP3-231	ENST00000584063	DNAH7	Q8WXX0	4024 aa		7.4	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	PDE6G	P18545	87 aa		7.39	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	IGKV4-1	P06312	121 aa		7.39	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	CASC2	Q6XLA1	102 aa		7.39	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	HIGD2A	Q9BW72	106 aa		7.39	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	ERC2-IT1	O76042	136 aa		7.38	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063		Q9BRP9	147 aa		7.37	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	DNAH10OS	P0CZ25	163 aa		7.36	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	SMIM29	Q86T20	159 aa		7.36	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	PRR4	Q16378	134 aa		7.35	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	KRTAP7-1	Q8IUC3	87 aa		7.35	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	PLEC	Q15149	4684 aa	Known RBP	7.35	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063		A0A1W2PNM2	257 aa		7.35	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	ETDC	A0A1B0GVM5	59 aa		7.34	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	IGKV2-24	A0A0C4DH68	120 aa		7.34	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	CSAG1	Q6PB30	78 aa		7.34	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063		Q8N9P0	234 aa	Predicted RBP	7.34	□□□□□ -1.23
CDK5RAP3-231	ENST00000584063	C1orf137	Q5JT78	98 aa		7.33	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	KRTAP1-5	Q9BYS1	174 aa		7.32	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	KCNQ1DN	Q9H478	68 aa		7.32	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	C8orf17	Q9NRJ1	99 aa		7.32	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	STARD9	Q9P2P6	4700 aa		7.31	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	LUZP6	Q538Z0	58 aa		7.31	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		Q6ZRX8	168 aa		7.31	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	APLN	Q9ULZ1	77 aa		7.31	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	PRLH	P81277	87 aa		7.3	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	OCR1	Q9BZK8	76 aa		7.3	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	7.3	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		K7EQZ3	153 aa		7.3	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		H3BQ85	93 aa		7.29	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		A0A096LNI7	61 aa		7.28	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		P0C880	135 aa		7.28	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	ASB16-AS1	Q495Z4	193 aa		7.28	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	IGLV1-50	A0A075B6I6	118 aa		7.28	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063	MIR22HG	Q0VDD5	57 aa		7.28	□□□□□ -1.24
CDK5RAP3-231	ENST00000584063		A8MWP4	228 aa		7.27	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063		Q6ZR54	194 aa		7.27	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	RPL37A	P61513	92 aa	Known RBP	7.26	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	WFDC13	Q8IUB5	93 aa		7.26	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	NUPR2	A6NF83	97 aa		7.26	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	IGLV5-48	A0A075B6I7	105 aa		7.25	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	KMT2A	Q03164	3969 aa		7.25	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	LOC101927531	A0A1B0GV80	90 aa		7.25	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	DSCR10	P59022	87 aa		7.25	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	KRTAP4-16	G5E9R7	235 aa	Predicted RBP	7.24	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	DHRS4-AS1	Q9P1J3	65 aa		7.24	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063		Q8NBF4	154 aa		7.23	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063		A0A087WSZ3	146 aa		7.21	□□□□□ -1.25
CDK5RAP3-231	ENST00000584063	NBDY	A0A0U1RRE5	68 aa		7.2	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	TLX1NB	P0CAT3	122 aa		7.2	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	KRTAP11-1	Q8IUC1	163 aa		7.2	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	DYNC2H1	Q8NCM8	4307 aa	Known RBP	7.19	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	LY6G6C	O95867	125 aa		7.19	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	IGFL1	Q6UW32	110 aa		7.19	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	RTL8C	O15255	209 aa		7.18	□□□□□ -1.26
CDK5RAP3-231	ENST00000584063	SPRR1A	P35321	89 aa		7.18	□□□□□ -1.26

Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms