RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 FAM229AH3BQW9 127 aa6.25□□□□□ -1.41
TRAPPC8-211ENST00000582539 SPINK1P00995 79 aa6.23□□□□□ -1.41
TRAPPC8-211ENST00000582539 CIRBP-AS1Q8TBR5 109 aa6.23□□□□□ -1.41
TRAPPC8-211ENST00000582539 NIPBLQ6KC79 2804 aaeCLIP6.23□□□□□ -1.41
TRAPPC8-211ENST00000582539 TACC2O95359 2948 aa6.23□□□□□ -1.41
TRAPPC8-211ENST00000582539 RPS29P62273 56 aaKnown RBP6.23□□□□□ -1.41
TRAPPC8-211ENST00000582539 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
TRAPPC8-211ENST00000582539 FAM30AQ9NZY2 134 aa6.22□□□□□ -1.41
TRAPPC8-211ENST00000582539 CFAP47Q6ZTR5 3102 aa6.22□□□□□ -1.41
TRAPPC8-211ENST00000582539 Q5XG85 94 aa6.22□□□□□ -1.41
TRAPPC8-211ENST00000582539 WFDC13Q8IUB5 93 aa6.21□□□□□ -1.41
TRAPPC8-211ENST00000582539 LOC101927531A0A1B0GV80 90 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 KRTAP7-1Q8IUC3 87 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 OTOGQ6ZRI0 2925 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 SMIM26A0A096LP01 95 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 TYMSOSQ8TAI1 123 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 COL6A5A8TX70 2615 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 H0Y9P7 68 aa6.2□□□□□ -1.42
TRAPPC8-211ENST00000582539 MRPL34Q9BQ48 92 aaKnown RBP6.19□□□□□ -1.42
TRAPPC8-211ENST00000582539 C8orf17Q9NRJ1 99 aa6.19□□□□□ -1.42
TRAPPC8-211ENST00000582539 TRAV22A0A0B4J277 110 aa6.18□□□□□ -1.42
TRAPPC8-211ENST00000582539 ASH1LQ9NR48 2969 aaKnown RBP6.18□□□□□ -1.42
TRAPPC8-211ENST00000582539 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
TRAPPC8-211ENST00000582539 LINC00472Q9H8W2 130 aa6.17□□□□□ -1.42
TRAPPC8-211ENST00000582539 K7EQZ3 153 aa6.17□□□□□ -1.42
TRAPPC8-211ENST00000582539 Q6ZSA8 131 aa6.17□□□□□ -1.42
TRAPPC8-211ENST00000582539 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
TRAPPC8-211ENST00000582539 MGAM2Q2M2H8 2515 aa6.16□□□□□ -1.42
TRAPPC8-211ENST00000582539 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
TRAPPC8-211ENST00000582539 DSCR10P59022 87 aa6.16□□□□□ -1.42
TRAPPC8-211ENST00000582539 STAB1Q9NY15 2570 aa6.16□□□□□ -1.42
TRAPPC8-211ENST00000582539 LINC00313P59037 77 aa6.15□□□□□ -1.42
TRAPPC8-211ENST00000582539 LINC00304Q8N9R0 145 aa6.14□□□□□ -1.43
TRAPPC8-211ENST00000582539 SPTSSBQ8NFR3 76 aa6.14□□□□□ -1.43
TRAPPC8-211ENST00000582539 A0A0U1RQV1 116 aa6.14□□□□□ -1.43
TRAPPC8-211ENST00000582539 LINC00208Q96KT6 92 aa6.13□□□□□ -1.43
TRAPPC8-211ENST00000582539 HRCT1Q6UXD1 115 aa6.13□□□□□ -1.43
TRAPPC8-211ENST00000582539 CRYBG3Q68DQ2 2970 aa6.13□□□□□ -1.43
TRAPPC8-211ENST00000582539 C1orf64Q8NEQ6 169 aa6.13□□□□□ -1.43
TRAPPC8-211ENST00000582539 Q8N9L7 120 aa6.11□□□□□ -1.43
TRAPPC8-211ENST00000582539 SNURFQ9Y675 71 aa6.11□□□□□ -1.43
TRAPPC8-211ENST00000582539 C1orf195Q5TG92 126 aa6.1□□□□□ -1.43
TRAPPC8-211ENST00000582539 KRTAP10-1P60331 282 aa6.08□□□□□ -1.44
TRAPPC8-211ENST00000582539 CHKB-CPT1BH3BT56 60 aa6.07□□□□□ -1.44
TRAPPC8-211ENST00000582539 CYP4F30PQ9H0H9 118 aa6.07□□□□□ -1.44
TRAPPC8-211ENST00000582539 H7BZZ5 65 aa6.07□□□□□ -1.44
TRAPPC8-211ENST00000582539 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
TRAPPC8-211ENST00000582539 PRR15LQ9BU68 103 aa6.06□□□□□ -1.44
TRAPPC8-211ENST00000582539 PANO1I0J062 215 aa6.05□□□□□ -1.44
TRAPPC8-211ENST00000582539 KRTAP10-2P60368 255 aa6.05□□□□□ -1.44
TRAPPC8-211ENST00000582539 NF1P21359 2839 aa6.04□□□□□ -1.44
TRAPPC8-211ENST00000582539 KRTAP29-1A8MX34 341 aaPredicted RBP6.04□□□□□ -1.44
TRAPPC8-211ENST00000582539 DEFB116Q30KQ4 102 aa6.03□□□□□ -1.44
TRAPPC8-211ENST00000582539 ACYP2P14621 99 aa6.03□□□□□ -1.44
TRAPPC8-211ENST00000582539 NOTCH1P46531 2555 aa6.03□□□□□ -1.44
TRAPPC8-211ENST00000582539 FP248Q71RG6 208 aaPredicted RBP6.01□□□□□ -1.45
TRAPPC8-211ENST00000582539 LAMA5O15230 3695 aa6.01□□□□□ -1.45
TRAPPC8-211ENST00000582539 CELSR1Q9NYQ6 3014 aa6.01□□□□□ -1.45
TRAPPC8-211ENST00000582539 RELNP78509 3460 aa6□□□□□ -1.45
TRAPPC8-211ENST00000582539 KRTAP11-1Q8IUC1 163 aa6□□□□□ -1.45
TRAPPC8-211ENST00000582539 NBEAL2Q6ZNJ1 2754 aa6□□□□□ -1.45
TRAPPC8-211ENST00000582539 A8MUN3 132 aa5.98□□□□□ -1.45
TRAPPC8-211ENST00000582539 SEC61GP60059 68 aa5.98□□□□□ -1.45
TRAPPC8-211ENST00000582539 SPENQ96T58 3664 aaKnown RBP5.97□□□□□ -1.45
TRAPPC8-211ENST00000582539 IGLV7-46A0A075B6I9 117 aa5.95□□□□□ -1.46
TRAPPC8-211ENST00000582539 ZCCHC13Q8WW36 166 aaKnown RBP5.95□□□□□ -1.46
TRAPPC8-211ENST00000582539 ASPMQ8IZT6 3477 aa5.95□□□□□ -1.46
TRAPPC8-211ENST00000582539 C7orf65Q6ZTY9 151 aa5.95□□□□□ -1.46
TRAPPC8-211ENST00000582539 AKAP9Q99996 3911 aa5.95□□□□□ -1.46
TRAPPC8-211ENST00000582539 Q96NJ1 140 aa5.93□□□□□ -1.46
TRAPPC8-211ENST00000582539 TENM1Q9UKZ4 2725 aa5.92□□□□□ -1.46
TRAPPC8-211ENST00000582539 NBEAL1Q6ZS30 2694 aa5.92□□□□□ -1.46
TRAPPC8-211ENST00000582539 ANAPC11Q9NYG5 84 aa5.9□□□□□ -1.46
TRAPPC8-211ENST00000582539 A0A0G2JQZ4 141 aa5.9□□□□□ -1.46
TRAPPC8-211ENST00000582539 Q8N9P0 234 aaPredicted RBP5.89□□□□□ -1.47
TRAPPC8-211ENST00000582539 STAB2Q8WWQ8 2551 aa5.89□□□□□ -1.47
TRAPPC8-211ENST00000582539 OXTP01178 125 aa5.88□□□□□ -1.47
TRAPPC8-211ENST00000582539 ATP11AUNQ6ZP68 121 aa5.88□□□□□ -1.47
TRAPPC8-211ENST00000582539 A0A1B0GVY2 172 aa5.88□□□□□ -1.47
TRAPPC8-211ENST00000582539 PCOTHQ58A44 107 aa5.88□□□□□ -1.47
TRAPPC8-211ENST00000582539 PRR26Q8N8Z3 221 aa5.87□□□□□ -1.47
TRAPPC8-211ENST00000582539 KRTAP13-2Q52LG2 175 aa5.86□□□□□ -1.47
TRAPPC8-211ENST00000582539 SMG1Q96Q15 3661 aaKnown RBP5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 IGKV2-30P06310 120 aa5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 Q1T7F1 81 aa5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 TENM3Q9P273 2699 aa5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 KRTAP1-4P0C5Y4 121 aa5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 COA5Q86WW8 74 aa5.85□□□□□ -1.47
TRAPPC8-211ENST00000582539 A0A087X002 238 aa5.84□□□□□ -1.47
TRAPPC8-211ENST00000582539 IGKV2D-30A0A075B6S6 120 aa5.83□□□□□ -1.48
TRAPPC8-211ENST00000582539 SMR3BP02814 79 aaPredicted RBP5.83□□□□□ -1.48
TRAPPC8-211ENST00000582539 Q5VSD8 79 aa5.83□□□□□ -1.48
TRAPPC8-211ENST00000582539 VWFP04275 2813 aa5.82□□□□□ -1.48
TRAPPC8-211ENST00000582539 ALMS1Q8TCU4 4167 aa5.8□□□□□ -1.48
TRAPPC8-211ENST00000582539 Q5W150 140 aa5.8□□□□□ -1.48
TRAPPC8-211ENST00000582539 MPLKIPQ8TAP9 179 aa5.79□□□□□ -1.48
TRAPPC8-211ENST00000582539 FBN1P35555 2871 aaKnown RBP5.79□□□□□ -1.48
TRAPPC8-211ENST00000582539 HUWE1Q7Z6Z7 4374 aaKnown RBP5.78□□□□□ -1.48
TRAPPC8-211ENST00000582539 PRR4Q16378 134 aa5.78□□□□□ -1.48
TRAPPC8-211ENST00000582539 Q75L30 129 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms