RNA–Protein interactions for RNA: ENST00000579969.1

SNORD53-201, Transcript of small nucleolar RNA, C/D box 53, humanhuman

BASIC

Gene SNORD53, Length 78 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD53-201ENST00000579969 SPINK13Q1W4C9 94 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 FAM74A4Q5TZK3 123 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 ENHOQ6UWT2 76 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 Q8TAT8 98 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 RETNLBQ9BQ08 111 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 CDC42SE1Q9NRR8 79 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 C11orf21Q9P2W6 132 aa1.54□□□□□ -2.16
SNORD53-201ENST00000579969 TRGV2A0A075B6R0 118 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 H3BQ85 93 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 GNRH2O43555 120 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 TSHBP01222 138 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 MGPP08493 103 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 PRR4Q16378 134 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 NREPQ16612 68 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 MIAQ16674 131 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 IGFL4Q6B9Z1 124 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 REG3GQ6UW15 175 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 Q6ZRP5 223 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 Q6ZTI0 123 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 C14orf178Q8N769 122 aaPredicted RBP1.53□□□□□ -2.16
SNORD53-201ENST00000579969 CHCHD10Q8WYQ3 142 aaPredicted RBP1.53□□□□□ -2.16
SNORD53-201ENST00000579969 AMELXQ99217 191 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 PRR15LQ9BU68 103 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 LINC00846Q9NV44 126 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 ORMDL1Q9P0S3 153 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 PRO0255Q9UI72 69 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 KIF25-AS1Q9Y6Z4 181 aa1.53□□□□□ -2.16
SNORD53-201ENST00000579969 TRBV7-4A0A0J9YYF1 115 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 K7EQD1 137 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 K7ERS5 55 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 IGHV3-53P01767 116 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 IGHV3-30-3P0DP02 117 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 RNASE3P12724 160 aaKnown RBP1.52□□□□□ -2.17
SNORD53-201ENST00000579969 TSPEAR-AS2P59090 65 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 ELOF1P60002 83 aaKnown RBP1.52□□□□□ -2.17
SNORD53-201ENST00000579969 FAM229BQ4G0N7 80 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 LINC01556Q5JQF7 62 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 LINC00242Q5T6M2 205 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 ZFAND2AQ8N6M9 145 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 C20orf203Q8NBC4 194 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 RPL39LQ96EH5 51 aaKnown RBP1.52□□□□□ -2.17
SNORD53-201ENST00000579969 C14orf132Q9NPU4 83 aa1.52□□□□□ -2.17
SNORD53-201ENST00000579969 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP1.52□□□□□ -2.17
SNORD53-201ENST00000579969 IGLV4-3A0A075B6K6 122 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 TRGV1A0A0A0MS02 117 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 IGLV9-49A0A0B4J1Y8 123 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 IGHV3-16A0A0C4DH30 117 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 KRTAP16-1A8MUX0 517 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 M0QY20 66 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 BPY2O14599 106 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 CRPP02741 224 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 RPL39P62891 51 aaKnown RBP1.51□□□□□ -2.17
SNORD53-201ENST00000579969 REG3AQ06141 175 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 ADAMTSL4-AS1Q5T5F5 129 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 PRR9Q5T870 116 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 Q5VV11 94 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 SUMO4Q6EEV6 95 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 SPINK6Q6UWN8 80 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 LITAFQ99732 161 aa1.51□□□□□ -2.17
SNORD53-201ENST00000579969 IGHV1OR15-1A0A075B7D0 117 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 A0A087WYN8 130 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 TRGV4A0A0C4DH28 118 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 LOC101927531A0A1B0GV80 90 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 NDUFA1O15239 70 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 C14orf177Q52M58 125 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 Q8N3U1 123 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 C9orf163Q8N9P6 203 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 C1orf64Q8NEQ6 169 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 C7orf33Q8WU49 177 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 OBSCN-AS1Q96MR7 158 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 SND1-IT1Q9HBX3 110 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 CDC42SE2Q9NRR3 84 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 PSORS1C2Q9UIG4 136 aa1.5□□□□□ -2.17
SNORD53-201ENST00000579969 SSPOA2VEC9 5147 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 IGHV3-64A0A075B6Q5 118 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 IGKV2D-24A0A075B6R9 120 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 IGLV5-45A0A087WSX0 123 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 IGLV5-39A0A0G2JS06 123 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 SPAG11BQ08648 103 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 MOBPQ13875 183 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 SPAG11AQ6PDA7 123 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 LINC00308Q8TCZ7 52 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 Q9BRP9 147 aa1.49□□□□□ -2.17
SNORD53-201ENST00000579969 LOC110117498A0A087WWA1 95 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 NCR3O14931 201 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 RNASE13Q5GAN3 156 aaKnown RBP1.48□□□□□ -2.17
SNORD53-201ENST00000579969 Q8N9P0 234 aaPredicted RBP1.48□□□□□ -2.17
SNORD53-201ENST00000579969 FAM104AQ969W3 186 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 CAMK2N2Q96S95 79 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 CHCHD7Q9BUK0 85 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 HIGD2AQ9BW72 106 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 PLAC8Q9NZF1 115 aa1.48□□□□□ -2.17
SNORD53-201ENST00000579969 USH2AO75445 5202 aa1.47□□□□□ -2.17
SNORD53-201ENST00000579969 FCGBPQ9Y6R7 5405 aaPredicted RBP1.47□□□□□ -2.17
SNORD53-201ENST00000579969 TRBV10-1A0A0K0K1A3 114 aa1.47□□□□□ -2.17
SNORD53-201ENST00000579969 H3BPC8 53 aa1.47□□□□□ -2.17
SNORD53-201ENST00000579969 CHTF8P0CG12 524 aa1.47□□□□□ -2.17
SNORD53-201ENST00000579969 CNBPP62633 177 aaKnown RBP1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms