RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-216ENST00000577001 WIPF1O43516 503 aa9.34□□□□□ -0.91
PRPF8-216ENST00000577001 Q8NBF4 154 aa9.34□□□□□ -0.91
PRPF8-216ENST00000577001 BRK1Q8WUW1 75 aa9.34□□□□□ -0.91
PRPF8-216ENST00000577001 OCR1Q9BZK8 76 aa9.34□□□□□ -0.91
PRPF8-216ENST00000577001 KRTAP4-16G5E9R7 235 aaPredicted RBP9.34□□□□□ -0.91
PRPF8-216ENST00000577001 EPM2AB3EWF7 344 aa9.32□□□□□ -0.92
PRPF8-216ENST00000577001 SERP1Q9Y6X1 66 aa9.32□□□□□ -0.92
PRPF8-216ENST00000577001 IGLV5-48A0A075B6I7 105 aa9.31□□□□□ -0.92
PRPF8-216ENST00000577001 H0Y9J4 135 aa9.3□□□□□ -0.92
PRPF8-216ENST00000577001 FBN3Q75N90 2809 aa9.29□□□□□ -0.92
PRPF8-216ENST00000577001 PSPHP1O15172 72 aa9.29□□□□□ -0.92
PRPF8-216ENST00000577001 LINC00208Q96KT6 92 aa9.28□□□□□ -0.92
PRPF8-216ENST00000577001 H3BQ85 93 aa9.26□□□□□ -0.93
PRPF8-216ENST00000577001 TNP2Q05952 138 aa9.25□□□□□ -0.93
PRPF8-216ENST00000577001 MDFIQ99750 246 aa9.24□□□□□ -0.93
PRPF8-216ENST00000577001 PLECQ15149 4684 aaKnown RBP9.24□□□□□ -0.93
PRPF8-216ENST00000577001 SPRR1AP35321 89 aa9.24□□□□□ -0.93
PRPF8-216ENST00000577001 HCG22E2RYF7 251 aa9.23□□□□□ -0.93
PRPF8-216ENST00000577001 TLX1NBP0CAT3 122 aa9.22□□□□□ -0.93
PRPF8-216ENST00000577001 SMIM26A0A096LP01 95 aa9.22□□□□□ -0.93
PRPF8-216ENST00000577001 PCOTHQ58A44 107 aa9.2□□□□□ -0.94
PRPF8-216ENST00000577001 C16orf90A8MZG2 172 aa9.2□□□□□ -0.94
PRPF8-216ENST00000577001 SPINK6Q6UWN8 80 aa9.2□□□□□ -0.94
PRPF8-216ENST00000577001 NDUFS5O43920 106 aa9.19□□□□□ -0.94
PRPF8-216ENST00000577001 C1orf64Q8NEQ6 169 aa9.19□□□□□ -0.94
PRPF8-216ENST00000577001 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.19□□□□□ -0.94
PRPF8-216ENST00000577001 DNAH3Q8TD57 4116 aa9.17□□□□□ -0.94
PRPF8-216ENST00000577001 FRAS1Q86XX4 4008 aa9.16□□□□□ -0.94
PRPF8-216ENST00000577001 DNAH1Q9P2D7 4330 aa9.15□□□□□ -0.94
PRPF8-216ENST00000577001 SPRR4Q96PI1 79 aa9.15□□□□□ -0.94
PRPF8-216ENST00000577001 A8MU10 97 aa9.14□□□□□ -0.95
PRPF8-216ENST00000577001 CASC2Q6XLA1 102 aa9.14□□□□□ -0.95
PRPF8-216ENST00000577001 PLA2G2DQ9UNK4 145 aa9.14□□□□□ -0.95
PRPF8-216ENST00000577001 RETNLBQ9BQ08 111 aa9.13□□□□□ -0.95
PRPF8-216ENST00000577001 MEGF8Q7Z7M0 2845 aa9.13□□□□□ -0.95
PRPF8-216ENST00000577001 NDUFC1O43677 76 aa9.13□□□□□ -0.95
PRPF8-216ENST00000577001 APLNQ9ULZ1 77 aa9.13□□□□□ -0.95
PRPF8-216ENST00000577001 IGLV5-37A0A075B6J1 123 aa9.12□□□□□ -0.95
PRPF8-216ENST00000577001 BCE1O60756 84 aa9.12□□□□□ -0.95
PRPF8-216ENST00000577001 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
PRPF8-216ENST00000577001 IGHV6-1A0A0B4J1U7 121 aa9.11□□□□□ -0.95
PRPF8-216ENST00000577001 H0Y9P7 68 aa9.11□□□□□ -0.95
PRPF8-216ENST00000577001 MP68P56378 58 aa9.09□□□□□ -0.95
PRPF8-216ENST00000577001 CNBPP62633 177 aaKnown RBP9.09□□□□□ -0.95
PRPF8-216ENST00000577001 STARD9Q9P2P6 4700 aa9.08□□□□□ -0.96
PRPF8-216ENST00000577001 B9D2Q9BPU9 175 aa9.08□□□□□ -0.96
PRPF8-216ENST00000577001 MOBPQ13875 183 aa9.08□□□□□ -0.96
PRPF8-216ENST00000577001 F8WDY8 70 aa9.07□□□□□ -0.96
PRPF8-216ENST00000577001 NBDYA0A0U1RRE5 68 aa9.07□□□□□ -0.96
PRPF8-216ENST00000577001 A8MUN3 132 aa9.06□□□□□ -0.96
PRPF8-216ENST00000577001 PRR15Q8IV56 129 aa9.06□□□□□ -0.96
PRPF8-216ENST00000577001 A0A087X002 238 aa9.05□□□□□ -0.96
PRPF8-216ENST00000577001 NOTCH2NLQ7Z3S9 236 aa9.05□□□□□ -0.96
PRPF8-216ENST00000577001 C9orf163Q8N9P6 203 aa9.05□□□□□ -0.96
PRPF8-216ENST00000577001 hDV103S1A0JD37 113 aa9.04□□□□□ -0.96
PRPF8-216ENST00000577001 PRKDCP78527 4128 aaKnown RBP9.04□□□□□ -0.96
PRPF8-216ENST00000577001 CIRBP-AS1Q8TBR5 109 aa9.01□□□□□ -0.97
PRPF8-216ENST00000577001 PRO0628Q9UI54 55 aa8.99□□□□□ -0.97
PRPF8-216ENST00000577001 PSORS1C2Q9UIG4 136 aa8.99□□□□□ -0.97
PRPF8-216ENST00000577001 LY6G6CO95867 125 aa8.99□□□□□ -0.97
PRPF8-216ENST00000577001 TRAV22A0A0B4J277 110 aa8.98□□□□□ -0.97
PRPF8-216ENST00000577001 ZCCHC13Q8WW36 166 aaKnown RBP8.97□□□□□ -0.97
PRPF8-216ENST00000577001 LINC00472Q9H8W2 130 aa8.97□□□□□ -0.97
PRPF8-216ENST00000577001 A8MWP4 228 aa8.97□□□□□ -0.97
PRPF8-216ENST00000577001 DNHD1Q96M86 4753 aa8.96□□□□□ -0.98
PRPF8-216ENST00000577001 ATP5EP56381 51 aaPredicted RBP8.96□□□□□ -0.98
PRPF8-216ENST00000577001 RTL8CO15255 209 aa8.95□□□□□ -0.98
PRPF8-216ENST00000577001 NDUFB1O75438 58 aa8.95□□□□□ -0.98
PRPF8-216ENST00000577001 C14orf177Q52M58 125 aa8.95□□□□□ -0.98
PRPF8-216ENST00000577001 SPTSSBQ8NFR3 76 aa8.94□□□□□ -0.98
PRPF8-216ENST00000577001 KRTAP29-1A8MX34 341 aaPredicted RBP8.94□□□□□ -0.98
PRPF8-216ENST00000577001 PRR15LQ9BU68 103 aa8.93□□□□□ -0.98
PRPF8-216ENST00000577001 A0A087WTM6 91 aa8.93□□□□□ -0.98
PRPF8-216ENST00000577001 CDK2AP2O75956 126 aa8.93□□□□□ -0.98
PRPF8-216ENST00000577001 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
PRPF8-216ENST00000577001 SPAG11AQ6PDA7 123 aa8.92□□□□□ -0.98
PRPF8-216ENST00000577001 CHKB-CPT1BH3BT56 60 aa8.91□□□□□ -0.98
PRPF8-216ENST00000577001 Q6ZRN7 208 aaPredicted RBP8.91□□□□□ -0.98
PRPF8-216ENST00000577001 DNAH8Q96JB1 4490 aa8.89□□□□□ -0.99
PRPF8-216ENST00000577001 IGLV5-52A0A0A0MRZ9 124 aa8.89□□□□□ -0.99
PRPF8-216ENST00000577001 DNAH6Q9C0G6 4158 aa8.88□□□□□ -0.99
PRPF8-216ENST00000577001 DNAH2Q9P225 4427 aa8.87□□□□□ -0.99
PRPF8-216ENST00000577001 SPACA4Q8TDM5 124 aa8.87□□□□□ -0.99
PRPF8-216ENST00000577001 DNAH17Q9UFH2 4485 aa8.87□□□□□ -0.99
PRPF8-216ENST00000577001 IGLV8-61A0A075B6I0 122 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 LCE6AA0A183 80 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 C1orf195Q5TG92 126 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 DNAH11Q96DT5 4516 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 CD164Q04900 197 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 VPS13DQ5THJ4 4388 aa8.86□□□□□ -0.99
PRPF8-216ENST00000577001 A0A1B0GW54 56 aa8.85□□□□□ -0.99
PRPF8-216ENST00000577001 C8orf17Q9NRJ1 99 aa8.85□□□□□ -0.99
PRPF8-216ENST00000577001 Q96NJ1 140 aa8.84□□□□□ -0.99
PRPF8-216ENST00000577001 COA5Q86WW8 74 aa8.84□□□□□ -0.99
PRPF8-216ENST00000577001 NUPR2A6NF83 97 aa8.83□□□□□ -1
PRPF8-216ENST00000577001 WWC2-AS2Q96NR7 200 aa8.82□□□□□ -1
PRPF8-216ENST00000577001 HECTD4Q9Y4D8 3996 aa8.82□□□□□ -1
PRPF8-216ENST00000577001 KRTAP13-1Q8IUC0 172 aa8.81□□□□□ -1
PRPF8-216ENST00000577001 PRR26Q8N8Z3 221 aa8.81□□□□□ -1
PRPF8-216ENST00000577001 KRTAP10-2P60368 255 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 274.6 ms