RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 APOC3P02656 99 aa5.06□□□□□ -1.6
CALCOCO2-227ENST00000575560 FABP4P15090 132 aa5.06□□□□□ -1.6
CALCOCO2-227ENST00000575560 KRTAP9-3Q9BYQ3 159 aa5.06□□□□□ -1.6
CALCOCO2-227ENST00000575560 SYNE2Q8WXH0 6885 aaKnown RBP5.04□□□□□ -1.6
CALCOCO2-227ENST00000575560 MT1FP04733 61 aa5.04□□□□□ -1.6
CALCOCO2-227ENST00000575560 A4D1N5 150 aa5.03□□□□□ -1.6
CALCOCO2-227ENST00000575560 TRGC2P03986 189 aa5.03□□□□□ -1.6
CALCOCO2-227ENST00000575560 LCE1DQ5T752 114 aa5.03□□□□□ -1.6
CALCOCO2-227ENST00000575560 MACF1Q9UPN3 7388 aaKnown RBP5.03□□□□□ -1.6
CALCOCO2-227ENST00000575560 TRBV7-7A0A0K0K1E9 115 aa5.02□□□□□ -1.61
CALCOCO2-227ENST00000575560 TRBV20-1A0A075B6N2 111 aa5.01□□□□□ -1.61
CALCOCO2-227ENST00000575560 ZNF815PA8K554 130 aa5.01□□□□□ -1.61
CALCOCO2-227ENST00000575560 Q96NJ1 140 aa5.01□□□□□ -1.61
CALCOCO2-227ENST00000575560 C20orf166-AS1Q96NR2 134 aa5.01□□□□□ -1.61
CALCOCO2-227ENST00000575560 S100A6P06703 90 aa5□□□□□ -1.61
CALCOCO2-227ENST00000575560 KRTAP10-10P60014 251 aa5□□□□□ -1.61
CALCOCO2-227ENST00000575560 TTTY13Q9BZ97 58 aa5□□□□□ -1.61
CALCOCO2-227ENST00000575560 NHP2Q9NX24 153 aaKnown RBP5□□□□□ -1.61
CALCOCO2-227ENST00000575560 A6NDN8 102 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 A8MUU9 505 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 F8WEM9 126 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 Q6JHZ5 121 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 IGFL1Q6UW32 110 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 CLEC2BQ92478 149 aa4.99□□□□□ -1.61
CALCOCO2-227ENST00000575560 SYS1-DBNDD2H3BUS1 97 aa4.98□□□□□ -1.61
CALCOCO2-227ENST00000575560 SMIM6P0DI80 62 aa4.97□□□□□ -1.61
CALCOCO2-227ENST00000575560 C21orf62-AS1Q17RA5 79 aa4.97□□□□□ -1.61
CALCOCO2-227ENST00000575560 KRTAP19-6Q3LI70 58 aa4.97□□□□□ -1.61
CALCOCO2-227ENST00000575560 OCIAD2Q56VL3 154 aa4.97□□□□□ -1.61
CALCOCO2-227ENST00000575560 SMIM11BQ8TCY0 68 aa4.97□□□□□ -1.61
CALCOCO2-227ENST00000575560 LST1O00453 97 aa4.96□□□□□ -1.62
CALCOCO2-227ENST00000575560 IFITM1P13164 125 aa4.96□□□□□ -1.62
CALCOCO2-227ENST00000575560 LINC01545Q5VT33 79 aa4.96□□□□□ -1.62
CALCOCO2-227ENST00000575560 TRAV13-2A0A0B4J235 113 aa4.95□□□□□ -1.62
CALCOCO2-227ENST00000575560 KRTAP16-1A8MUX0 517 aa4.95□□□□□ -1.62
CALCOCO2-227ENST00000575560 LINC00575Q6W349 94 aa4.95□□□□□ -1.62
CALCOCO2-227ENST00000575560 COPS9Q8WXC6 57 aa4.95□□□□□ -1.62
CALCOCO2-227ENST00000575560 LINC00846Q9NV44 126 aa4.95□□□□□ -1.62
CALCOCO2-227ENST00000575560 PCP4L1A6NKN8 68 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 Q6ZVH6 145 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 MUSTN1Q8IVN3 82 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 MPLKIPQ8TAP9 179 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 C12orf57Q99622 126 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 KRTAP4-7Q9BYR0 210 aa4.94□□□□□ -1.62
CALCOCO2-227ENST00000575560 KRTAP6-3Q3LI67 103 aa4.93□□□□□ -1.62
CALCOCO2-227ENST00000575560 SCGB1D4Q6XE38 83 aa4.93□□□□□ -1.62
CALCOCO2-227ENST00000575560 Q6ZQY7 126 aa4.93□□□□□ -1.62
CALCOCO2-227ENST00000575560 FAM236DA0A1B0GTK5 79 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 hADV29S1A0JD25 119 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 C9orf118A6NHY6 69 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 FAM236CP0DP71 79 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 VAMP3Q15836 100 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 PET117Q6UWS5 81 aa4.92□□□□□ -1.62
CALCOCO2-227ENST00000575560 S100A2P29034 98 aa4.91□□□□□ -1.62
CALCOCO2-227ENST00000575560 HRES1P13985 223 aa4.9□□□□□ -1.63
CALCOCO2-227ENST00000575560 COLCA2A8K830 154 aa4.89□□□□□ -1.63
CALCOCO2-227ENST00000575560 RBM12B-AS1Q9P1G2 102 aa4.89□□□□□ -1.63
CALCOCO2-227ENST00000575560 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.88□□□□□ -1.63
CALCOCO2-227ENST00000575560 PPDPFLQ8WWR9 84 aa4.88□□□□□ -1.63
CALCOCO2-227ENST00000575560 KRTAP4-9Q9BYQ8 210 aa4.88□□□□□ -1.63
CALCOCO2-227ENST00000575560 SS18L2Q9UHA2 77 aa4.88□□□□□ -1.63
CALCOCO2-227ENST00000575560 H3BUT2 72 aa4.87□□□□□ -1.63
CALCOCO2-227ENST00000575560 C3orf79P0CE67 100 aa4.87□□□□□ -1.63
CALCOCO2-227ENST00000575560 DSCR10P59022 87 aa4.87□□□□□ -1.63
CALCOCO2-227ENST00000575560 NOTCH2NLQ7Z3S9 236 aa4.87□□□□□ -1.63
CALCOCO2-227ENST00000575560 SCGB1D1O95968 90 aa4.86□□□□□ -1.63
CALCOCO2-227ENST00000575560 SNRPEP62304 92 aaKnown RBP4.86□□□□□ -1.63
CALCOCO2-227ENST00000575560 SNHG12Q9BXW3 62 aa4.86□□□□□ -1.63
CALCOCO2-227ENST00000575560 KRTAP3-1Q9BYR8 98 aa4.86□□□□□ -1.63
CALCOCO2-227ENST00000575560 TSTD3H0UI37 97 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BKO60814 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BJP06899 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BOP23527 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BBP33778 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BDP58876 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BCP62807 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST2H2BEQ16778 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 TEN1Q86WV5 123 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BHQ93079 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BNQ99877 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 HIST1H2BMQ99879 126 aa4.85□□□□□ -1.63
CALCOCO2-227ENST00000575560 LINC00313P59037 77 aa4.83□□□□□ -1.64
CALCOCO2-227ENST00000575560 A0A087WSZ3 146 aa4.82□□□□□ -1.64
CALCOCO2-227ENST00000575560 KRTDAPP60985 99 aa4.82□□□□□ -1.64
CALCOCO2-227ENST00000575560 BVES-AS1Q5T3Y7 98 aa4.8□□□□□ -1.64
CALCOCO2-227ENST00000575560 LCE5AQ5TCM9 118 aa4.8□□□□□ -1.64
CALCOCO2-227ENST00000575560 ATOH7Q8N100 152 aa4.8□□□□□ -1.64
CALCOCO2-227ENST00000575560 MTURNQ8N3F0 131 aa4.79□□□□□ -1.64
CALCOCO2-227ENST00000575560 NDUFV3P56181 108 aaKnown RBP4.78□□□□□ -1.64
CALCOCO2-227ENST00000575560 SIGMAR1Q99720 223 aa4.78□□□□□ -1.64
CALCOCO2-227ENST00000575560 A8MWP4 228 aa4.77□□□□□ -1.65
CALCOCO2-227ENST00000575560 COA6Q5JTJ3 125 aaKnown RBP4.77□□□□□ -1.65
CALCOCO2-227ENST00000575560 MUC12Q9UKN1 5478 aa4.77□□□□□ -1.65
CALCOCO2-227ENST00000575560 IGKV4-1P06312 121 aa4.76□□□□□ -1.65
CALCOCO2-227ENST00000575560 HIST3H2BBQ8N257 126 aa4.76□□□□□ -1.65
CALCOCO2-227ENST00000575560 NEBP20929 6669 aa4.75□□□□□ -1.65
CALCOCO2-227ENST00000575560 A0A1W2PNM2 257 aa4.75□□□□□ -1.65
CALCOCO2-227ENST00000575560 H3BMG7 143 aa4.75□□□□□ -1.65
CALCOCO2-227ENST00000575560 Q8N9P0 234 aaPredicted RBP4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms