RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 UBE2AP49459 152 aa9.14□□□□□ -0.95
SMG6-215ENST00000574501 INAFM1C9JVW0 142 aa9.13□□□□□ -0.95
SMG6-215ENST00000574501 MRPL55Q7Z7F7 128 aaKnown RBP9.13□□□□□ -0.95
SMG6-215ENST00000574501 PLA2G2DQ9UNK4 145 aa9.13□□□□□ -0.95
SMG6-215ENST00000574501 SRRM2Q9UQ35 2752 aaKnown RBP9.13□□□□□ -0.95
SMG6-215ENST00000574501 ANK2Q01484 3957 aa9.12□□□□□ -0.95
SMG6-215ENST00000574501 TLX1NBP0CAT3 122 aa9.12□□□□□ -0.95
SMG6-215ENST00000574501 CASC10Q5T4H9 136 aa9.12□□□□□ -0.95
SMG6-215ENST00000574501 LIMD2Q9BT23 127 aa9.12□□□□□ -0.95
SMG6-215ENST00000574501 LINC00588Q9Y4M8 146 aa9.12□□□□□ -0.95
SMG6-215ENST00000574501 KRTAP29-1A8MX34 341 aaPredicted RBP9.11□□□□□ -0.95
SMG6-215ENST00000574501 LINC01556Q5JQF7 62 aa9.11□□□□□ -0.95
SMG6-215ENST00000574501 ATRQ13535 2644 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 IGLV5-37A0A075B6J1 123 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 CASC2Q6XLA1 102 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 LCA10Q71F78 164 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 SPANXA2-OT1Q8N9U9 137 aa9.1□□□□□ -0.95
SMG6-215ENST00000574501 REG3GQ6UW15 175 aa9.09□□□□□ -0.95
SMG6-215ENST00000574501 H3BNG1 76 aa9.09□□□□□ -0.96
SMG6-215ENST00000574501 TENM3Q9P273 2699 aa9.08□□□□□ -0.96
SMG6-215ENST00000574501 PRLHP81277 87 aa9.07□□□□□ -0.96
SMG6-215ENST00000574501 KTN1-AS1Q86SY8 53 aa9.07□□□□□ -0.96
SMG6-215ENST00000574501 A6NED7 52 aa9.07□□□□□ -0.96
SMG6-215ENST00000574501 CNBPP62633 177 aaKnown RBP9.06□□□□□ -0.96
SMG6-215ENST00000574501 COA5Q86WW8 74 aa9.04□□□□□ -0.96
SMG6-215ENST00000574501 C9orf163Q8N9P6 203 aa9.04□□□□□ -0.96
SMG6-215ENST00000574501 RBM12B-AS1Q9P1G2 102 aa9.04□□□□□ -0.96
SMG6-215ENST00000574501 FBN1P35555 2871 aaKnown RBP9.04□□□□□ -0.96
SMG6-215ENST00000574501 H3BPC8 53 aa9.02□□□□□ -0.97
SMG6-215ENST00000574501 Q75L30 129 aa9.02□□□□□ -0.97
SMG6-215ENST00000574501 ATP11AUNQ6ZP68 121 aa9.02□□□□□ -0.97
SMG6-215ENST00000574501 DEFB131BA0A096LNP1 70 aa9.01□□□□□ -0.97
SMG6-215ENST00000574501 PCOTHQ58A44 107 aa9□□□□□ -0.97
SMG6-215ENST00000574501 DNAH10OSP0CZ25 163 aa8.99□□□□□ -0.97
SMG6-215ENST00000574501 IGLV8-61A0A075B6I0 122 aa8.99□□□□□ -0.97
SMG6-215ENST00000574501 A8MWP4 228 aa8.99□□□□□ -0.97
SMG6-215ENST00000574501 DNAH1Q9P2D7 4330 aa8.98□□□□□ -0.97
SMG6-215ENST00000574501 LOC101927531A0A1B0GV80 90 aa8.98□□□□□ -0.97
SMG6-215ENST00000574501 A6NN06 94 aa8.97□□□□□ -0.97
SMG6-215ENST00000574501 H0Y9J4 135 aa8.97□□□□□ -0.97
SMG6-215ENST00000574501 IGKV2-24A0A0C4DH68 120 aa8.97□□□□□ -0.97
SMG6-215ENST00000574501 SPAG11AQ6PDA7 123 aa8.97□□□□□ -0.97
SMG6-215ENST00000574501 IGLV7-46A0A075B6I9 117 aa8.96□□□□□ -0.97
SMG6-215ENST00000574501 A0A096LNI7 61 aa8.96□□□□□ -0.97
SMG6-215ENST00000574501 LINC00472Q9H8W2 130 aa8.96□□□□□ -0.98
SMG6-215ENST00000574501 DNAH10Q8IVF4 4471 aa8.95□□□□□ -0.98
SMG6-215ENST00000574501 TENM2Q9NT68 2774 aa8.95□□□□□ -0.98
SMG6-215ENST00000574501 COL6A5A8TX70 2615 aa8.94□□□□□ -0.98
SMG6-215ENST00000574501 OXLD1Q5BKU9 147 aa8.94□□□□□ -0.98
SMG6-215ENST00000574501 CDC42SE1Q9NRR8 79 aa8.94□□□□□ -0.98
SMG6-215ENST00000574501 C11orf45Q8TAV5 145 aa8.93□□□□□ -0.98
SMG6-215ENST00000574501 MMP24-AS1A0A0U1RRL7 71 aa8.92□□□□□ -0.98
SMG6-215ENST00000574501 NDUFS5O43920 106 aa8.92□□□□□ -0.98
SMG6-215ENST00000574501 PHF5AQ7RTV0 110 aaKnown RBP8.92□□□□□ -0.98
SMG6-215ENST00000574501 LYSTQ99698 3801 aa8.91□□□□□ -0.98
SMG6-215ENST00000574501 STAB1Q9NY15 2570 aa8.91□□□□□ -0.98
SMG6-215ENST00000574501 MOBPQ13875 183 aa8.9□□□□□ -0.98
SMG6-215ENST00000574501 KRTAP10-11P60412 298 aa8.9□□□□□ -0.99
SMG6-215ENST00000574501 KRTAP11-1Q8IUC1 163 aa8.89□□□□□ -0.99
SMG6-215ENST00000574501 COL7A1Q02388 2944 aa8.89□□□□□ -0.99
SMG6-215ENST00000574501 SPINK7P58062 85 aa8.88□□□□□ -0.99
SMG6-215ENST00000574501 LINC01558Q9Y6Z2 57 aa8.88□□□□□ -0.99
SMG6-215ENST00000574501 C7orf65Q6ZTY9 151 aa8.85□□□□□ -0.99
SMG6-215ENST00000574501 PLAC8Q9NZF1 115 aa8.84□□□□□ -0.99
SMG6-215ENST00000574501 KRTAP24-1Q3LI83 254 aa8.84□□□□□ -0.99
SMG6-215ENST00000574501 CHTF8P0CG12 524 aa8.82□□□□□ -1
SMG6-215ENST00000574501 HRES1P13985 223 aa8.82□□□□□ -1
SMG6-215ENST00000574501 SPRR1BP22528 89 aa8.8□□□□□ -1
SMG6-215ENST00000574501 TP53AIP1Q9HCN2 124 aa8.78□□□□□ -1
SMG6-215ENST00000574501 Q96NJ1 140 aa8.78□□□□□ -1
SMG6-215ENST00000574501 CMYA5Q8N3K9 4069 aa8.77□□□□□ -1.01
SMG6-215ENST00000574501 Q6ZR54 194 aa8.77□□□□□ -1.01
SMG6-215ENST00000574501 DNAH9Q9NYC9 4486 aa8.76□□□□□ -1.01
SMG6-215ENST00000574501 IGHV6-1A0A0B4J1U7 121 aa8.76□□□□□ -1.01
SMG6-215ENST00000574501 C8orf17Q9NRJ1 99 aa8.76□□□□□ -1.01
SMG6-215ENST00000574501 NOTCH1P46531 2555 aa8.76□□□□□ -1.01
SMG6-215ENST00000574501 IGLV9-49A0A0B4J1Y8 123 aa8.75□□□□□ -1.01
SMG6-215ENST00000574501 ASB16-AS1Q495Z4 193 aa8.75□□□□□ -1.01
SMG6-215ENST00000574501 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
SMG6-215ENST00000574501 KRTAP1-5Q9BYS1 174 aa8.72□□□□□ -1.01
SMG6-215ENST00000574501 K7EIL1 84 aa8.71□□□□□ -1.01
SMG6-215ENST00000574501 PRAC1Q96KF2 57 aa8.71□□□□□ -1.01
SMG6-215ENST00000574501 NBEAL1Q6ZS30 2694 aa8.71□□□□□ -1.02
SMG6-215ENST00000574501 LINC00313P59037 77 aa8.7□□□□□ -1.02
SMG6-215ENST00000574501 MDFIQ99750 246 aa8.7□□□□□ -1.02
SMG6-215ENST00000574501 A0A087X002 238 aa8.7□□□□□ -1.02
SMG6-215ENST00000574501 NOTCH2NLQ7Z3S9 236 aa8.7□□□□□ -1.02
SMG6-215ENST00000574501 A0A1B0GVX0 72 aa8.68□□□□□ -1.02
SMG6-215ENST00000574501 MRPL34Q9BQ48 92 aaKnown RBP8.67□□□□□ -1.02
SMG6-215ENST00000574501 MGAM2Q2M2H8 2515 aa8.67□□□□□ -1.02
SMG6-215ENST00000574501 ADM2Q7Z4H4 148 aa8.66□□□□□ -1.02
SMG6-215ENST00000574501 DNAH3Q8TD57 4116 aa8.65□□□□□ -1.02
SMG6-215ENST00000574501 C8orf87E5RJ46 101 aa8.65□□□□□ -1.02
SMG6-215ENST00000574501 CDK2AP2O75956 126 aa8.64□□□□□ -1.03
SMG6-215ENST00000574501 PANO1I0J062 215 aa8.63□□□□□ -1.03
SMG6-215ENST00000574501 DNAH7Q8WXX0 4024 aa8.63□□□□□ -1.03
SMG6-215ENST00000574501 HUWE1Q7Z6Z7 4374 aaKnown RBP8.62□□□□□ -1.03
SMG6-215ENST00000574501 ALMS1Q8TCU4 4167 aa8.62□□□□□ -1.03
SMG6-215ENST00000574501 Q5W150 140 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms