RNA–Protein interactions for RNA: ENST00000574095.1

NPLOC4-215, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 3

Gene NPLOC4, Length 277 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-215ENST00000574095 PCOTHQ58A44 107 aa14.14□□□□□ -0.15
NPLOC4-215ENST00000574095 C14orf144Q96I85 54 aa14.12□□□□□ -0.15
NPLOC4-215ENST00000574095 BVES-AS1Q5T3Y7 98 aa14.11□□□□□ -0.15
NPLOC4-215ENST00000574095 TCL1BO95988 128 aa14.1□□□□□ -0.15
NPLOC4-215ENST00000574095 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP14.09□□□□□ -0.15
NPLOC4-215ENST00000574095 PAM16Q9Y3D7 125 aa14.08□□□□□ -0.16
NPLOC4-215ENST00000574095 IGLV8-61A0A075B6I0 122 aa14.07□□□□□ -0.16
NPLOC4-215ENST00000574095 CFC1BP0CG36 223 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 CFC1P0CG37 223 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 SPATA45Q537H7 98 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 OCIAD2Q56VL3 154 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 Q6JHZ5 121 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 IGFL1Q6UW32 110 aa14.06□□□□□ -0.16
NPLOC4-215ENST00000574095 CLEC2BQ92478 149 aa14.04□□□□□ -0.16
NPLOC4-215ENST00000574095 RAB37Q96AX2 223 aa14.03□□□□□ -0.16
NPLOC4-215ENST00000574095 HIGD1BQ9P298 99 aa14.03□□□□□ -0.16
NPLOC4-215ENST00000574095 TRBV7-7A0A0K0K1E9 115 aa14.01□□□□□ -0.17
NPLOC4-215ENST00000574095 SNHG12Q9BXW3 62 aa14.01□□□□□ -0.17
NPLOC4-215ENST00000574095 C2orf91Q6ZV80 131 aa14□□□□□ -0.17
NPLOC4-215ENST00000574095 PPDPFLQ8WWR9 84 aa14□□□□□ -0.17
NPLOC4-215ENST00000574095 VAMP8Q9BV40 100 aa14□□□□□ -0.17
NPLOC4-215ENST00000574095 LCE2CQ5TA81 110 aa13.98□□□□□ -0.17
NPLOC4-215ENST00000574095 A0A0B4J2C4 111 aa13.97□□□□□ -0.17
NPLOC4-215ENST00000574095 H3BUT2 72 aa13.96□□□□□ -0.17
NPLOC4-215ENST00000574095 RPL37P61927 97 aaKnown RBP13.96□□□□□ -0.17
NPLOC4-215ENST00000574095 KRTAP19-2Q3LHN2 52 aa13.95□□□□□ -0.18
NPLOC4-215ENST00000574095 FAM218AQ96MZ4 157 aa13.94□□□□□ -0.18
NPLOC4-215ENST00000574095 H0YGX0 51 aa13.93□□□□□ -0.18
NPLOC4-215ENST00000574095 CEND1Q8N111 149 aa13.93□□□□□ -0.18
NPLOC4-215ENST00000574095 SNCGO76070 127 aa13.91□□□□□ -0.18
NPLOC4-215ENST00000574095 PRO1854Q9UHT4 67 aa13.86□□□□□ -0.19
NPLOC4-215ENST00000574095 FXYD2P54710 66 aa13.85□□□□□ -0.19
NPLOC4-215ENST00000574095 NDUFV3P56181 108 aaKnown RBP13.84□□□□□ -0.19
NPLOC4-215ENST00000574095 TMEM238LA0A1B0GVL6 79 aa13.83□□□□□ -0.2
NPLOC4-215ENST00000574095 A6NJY4 79 aa13.83□□□□□ -0.2
NPLOC4-215ENST00000574095 LST1O00453 97 aa13.83□□□□□ -0.2
NPLOC4-215ENST00000574095 MT1HP80294 61 aa13.81□□□□□ -0.2
NPLOC4-215ENST00000574095 OBSCN-AS1Q96MR7 158 aa13.8□□□□□ -0.2
NPLOC4-215ENST00000574095 A0A1B0GX51 115 aa13.78□□□□□ -0.2
NPLOC4-215ENST00000574095 PYY3Q5JQD4 70 aa13.78□□□□□ -0.2
NPLOC4-215ENST00000574095 Q6Q795 121 aa13.78□□□□□ -0.2
NPLOC4-215ENST00000574095 TRIAP1O43715 76 aa13.77□□□□□ -0.21
NPLOC4-215ENST00000574095 TEN1Q86WV5 123 aa13.77□□□□□ -0.21
NPLOC4-215ENST00000574095 H3BMG7 143 aa13.76□□□□□ -0.21
NPLOC4-215ENST00000574095 FABP2P12104 132 aa13.76□□□□□ -0.21
NPLOC4-215ENST00000574095 SS18L2Q9UHA2 77 aa13.75□□□□□ -0.21
NPLOC4-215ENST00000574095 GHRHP01286 108 aa13.73□□□□□ -0.21
NPLOC4-215ENST00000574095 A0A087WSZ3 146 aa13.71□□□□□ -0.21
NPLOC4-215ENST00000574095 HSD52Q0P140 79 aa13.71□□□□□ -0.21
NPLOC4-215ENST00000574095 Q75L30 129 aa13.7□□□□□ -0.22
NPLOC4-215ENST00000574095 K7ERJ3 54 aa13.69□□□□□ -0.22
NPLOC4-215ENST00000574095 KRTAP9-6A0A140TA67 174 aa13.68□□□□□ -0.22
NPLOC4-215ENST00000574095 LCE2DQ5TA82 110 aaPredicted RBP13.68□□□□□ -0.22
NPLOC4-215ENST00000574095 ATP11AUNQ6ZP68 121 aa13.68□□□□□ -0.22
NPLOC4-215ENST00000574095 Q96NJ1 140 aa13.68□□□□□ -0.22
NPLOC4-215ENST00000574095 PSMB2P49721 201 aa13.66□□□□□ -0.22
NPLOC4-215ENST00000574095 A0A1W2PNM2 257 aa13.65□□□□□ -0.22
NPLOC4-215ENST00000574095 COX6B2Q6YFQ2 88 aa13.65□□□□□ -0.22
NPLOC4-215ENST00000574095 DNAL4O96015 105 aa13.63□□□□□ -0.23
NPLOC4-215ENST00000574095 ORMDL1Q9P0S3 153 aa13.62□□□□□ -0.23
NPLOC4-215ENST00000574095 TMA7Q9Y2S6 64 aaKnown RBP13.62□□□□□ -0.23
NPLOC4-215ENST00000574095 A0A1B0GV72 72 aa13.61□□□□□ -0.23
NPLOC4-215ENST00000574095 COX6CP09669 75 aa13.59□□□□□ -0.23
NPLOC4-215ENST00000574095 ANKRD29Q8N6D5 301 aa13.59□□□□□ -0.23
NPLOC4-215ENST00000574095 UQCR10Q9UDW1 63 aa13.58□□□□□ -0.24
NPLOC4-215ENST00000574095 FLGP20930 4061 aaPredicted RBP13.56□□□□□ -0.24
NPLOC4-215ENST00000574095 M0R2T5 61 aa13.56□□□□□ -0.24
NPLOC4-215ENST00000574095 H3BQ85 93 aa13.55□□□□□ -0.24
NPLOC4-215ENST00000574095 KRTAP10-6P60371 365 aaPredicted RBP13.55□□□□□ -0.24
NPLOC4-215ENST00000574095 C20orf166-AS1Q96NR2 134 aa13.55□□□□□ -0.24
NPLOC4-215ENST00000574095 TMEM256-PLSCR3K7ERE1 68 aa13.54□□□□□ -0.24
NPLOC4-215ENST00000574095 LORP23490 312 aaPredicted RBP13.54□□□□□ -0.24
NPLOC4-215ENST00000574095 DSCR10P59022 87 aa13.54□□□□□ -0.24
NPLOC4-215ENST00000574095 A8MUU9 505 aa13.53□□□□□ -0.24
NPLOC4-215ENST00000574095 TRBV7-4A0A0J9YYF1 115 aa13.52□□□□□ -0.25
NPLOC4-215ENST00000574095 SIGMAR1Q99720 223 aa13.52□□□□□ -0.25
NPLOC4-215ENST00000574095 IGKV4-1P06312 121 aa13.47□□□□□ -0.25
NPLOC4-215ENST00000574095 CCKP06307 115 aa13.45□□□□□ -0.26
NPLOC4-215ENST00000574095 SCGB1C2P0DMR2 95 aa13.45□□□□□ -0.26
NPLOC4-215ENST00000574095 UBE2V1Q13404 147 aa13.45□□□□□ -0.26
NPLOC4-215ENST00000574095 TRACP01848 142 aa13.43□□□□□ -0.26
NPLOC4-215ENST00000574095 LINC00313P59037 77 aa13.43□□□□□ -0.26
NPLOC4-215ENST00000574095 DEFB116Q30KQ4 102 aa13.43□□□□□ -0.26
NPLOC4-215ENST00000574095 LINC00472Q9H8W2 130 aa13.4□□□□□ -0.26
NPLOC4-215ENST00000574095 FSIP2Q5CZC0 6907 aa13.39□□□□□ -0.27
NPLOC4-215ENST00000574095 NOTCH2NLQ7Z3S9 236 aa13.37□□□□□ -0.27
NPLOC4-215ENST00000574095 KRTAP16-1A8MUX0 517 aa13.36□□□□□ -0.27
NPLOC4-215ENST00000574095 VPS25Q9BRG1 176 aa13.36□□□□□ -0.27
NPLOC4-215ENST00000574095 CRCT1Q9UGL9 99 aa13.36□□□□□ -0.27
NPLOC4-215ENST00000574095 RBM3P98179 157 aaKnown RBP13.34□□□□□ -0.27
NPLOC4-215ENST00000574095 BAALC-AS2P0C853 105 aa13.31□□□□□ -0.28
NPLOC4-215ENST00000574095 DSCR8Q96T75 97 aa13.31□□□□□ -0.28
NPLOC4-215ENST00000574095 TRBV20-1A0A075B6N2 111 aa13.3□□□□□ -0.28
NPLOC4-215ENST00000574095 IGHV6-1A0A0B4J1U7 121 aa13.3□□□□□ -0.28
NPLOC4-215ENST00000574095 NAA38Q9BRA0 125 aaKnown RBP13.24□□□□□ -0.29
NPLOC4-215ENST00000574095 C9JAW5 83 aa13.23□□□□□ -0.29
NPLOC4-215ENST00000574095 M0R143 59 aa13.22□□□□□ -0.29
NPLOC4-215ENST00000574095 A0A1B0GVX0 72 aa13.2□□□□□ -0.3
NPLOC4-215ENST00000574095 ATXN8Q156A1 80 aa13.18□□□□□ -0.3
NPLOC4-215ENST00000574095 C8orf87E5RJ46 101 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms