RNA–Protein interactions for RNA: ENST00000573126.1

RPAIN-212, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 2,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-212ENST00000573126 C4orf26Q17RF5 130 aa7.04□□□□□ -1.28
RPAIN-212ENST00000573126 NDUFC1O43677 76 aa7.03□□□□□ -1.28
RPAIN-212ENST00000573126 Q5XG85 94 aa7.03□□□□□ -1.28
RPAIN-212ENST00000573126 EPM2AB3EWF7 344 aa7.03□□□□□ -1.28
RPAIN-212ENST00000573126 SERP1Q9Y6X1 66 aa7.03□□□□□ -1.28
RPAIN-212ENST00000573126 A0A087WSZ3 146 aa7.01□□□□□ -1.29
RPAIN-212ENST00000573126 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
RPAIN-212ENST00000573126 MDFIQ99750 246 aa7□□□□□ -1.29
RPAIN-212ENST00000573126 DNHD1Q96M86 4753 aa7□□□□□ -1.29
RPAIN-212ENST00000573126 UBE2AP49459 152 aa7□□□□□ -1.29
RPAIN-212ENST00000573126 PLECQ15149 4684 aaKnown RBP7□□□□□ -1.29
RPAIN-212ENST00000573126 C14orf177Q52M58 125 aa6.99□□□□□ -1.29
RPAIN-212ENST00000573126 HRCT1Q6UXD1 115 aa6.99□□□□□ -1.29
RPAIN-212ENST00000573126 PANO1I0J062 215 aa6.98□□□□□ -1.29
RPAIN-212ENST00000573126 LRCOL1A6NCL2 159 aa6.98□□□□□ -1.29
RPAIN-212ENST00000573126 C9orf163Q8N9P6 203 aa6.98□□□□□ -1.29
RPAIN-212ENST00000573126 IGLV8-61A0A075B6I0 122 aa6.97□□□□□ -1.29
RPAIN-212ENST00000573126 NBDYA0A0U1RRE5 68 aa6.96□□□□□ -1.29
RPAIN-212ENST00000573126 HCG22E2RYF7 251 aa6.96□□□□□ -1.29
RPAIN-212ENST00000573126 RPL37AP61513 92 aaKnown RBP6.96□□□□□ -1.3
RPAIN-212ENST00000573126 B9D2Q9BPU9 175 aa6.95□□□□□ -1.3
RPAIN-212ENST00000573126 WFDC13Q8IUB5 93 aa6.95□□□□□ -1.3
RPAIN-212ENST00000573126 ATP5EP56381 51 aaPredicted RBP6.94□□□□□ -1.3
RPAIN-212ENST00000573126 FP248Q71RG6 208 aaPredicted RBP6.93□□□□□ -1.3
RPAIN-212ENST00000573126 LINC00474Q9P2X8 69 aa6.93□□□□□ -1.3
RPAIN-212ENST00000573126 Q6ZRN7 208 aaPredicted RBP6.93□□□□□ -1.3
RPAIN-212ENST00000573126 LCE6AA0A183 80 aa6.92□□□□□ -1.3
RPAIN-212ENST00000573126 H0Y9J4 135 aa6.92□□□□□ -1.3
RPAIN-212ENST00000573126 DYNC2H1Q8NCM8 4307 aaKnown RBP6.92□□□□□ -1.3
RPAIN-212ENST00000573126 STARD9Q9P2P6 4700 aa6.92□□□□□ -1.3
RPAIN-212ENST00000573126 SMIM26A0A096LP01 95 aa6.91□□□□□ -1.3
RPAIN-212ENST00000573126 SPRR1BP22528 89 aa6.91□□□□□ -1.3
RPAIN-212ENST00000573126 FAM229BQ4G0N7 80 aa6.91□□□□□ -1.3
RPAIN-212ENST00000573126 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.91□□□□□ -1.3
RPAIN-212ENST00000573126 NUPR2A6NF83 97 aa6.9□□□□□ -1.3
RPAIN-212ENST00000573126 PRKDCP78527 4128 aaKnown RBP6.88□□□□□ -1.31
RPAIN-212ENST00000573126 ZCCHC13Q8WW36 166 aaKnown RBP6.88□□□□□ -1.31
RPAIN-212ENST00000573126 KRTAP13-1Q8IUC0 172 aa6.87□□□□□ -1.31
RPAIN-212ENST00000573126 IGLV9-49A0A0B4J1Y8 123 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 SPACA4Q8TDM5 124 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 LINC00472Q9H8W2 130 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 KMT2AQ03164 3969 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 FRAS1Q86XX4 4008 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 PRR4Q16378 134 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 PRR15Q8IV56 129 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 MPLKIPQ8TAP9 179 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
RPAIN-212ENST00000573126 KRTAP29-1A8MX34 341 aaPredicted RBP6.85□□□□□ -1.31
RPAIN-212ENST00000573126 CASC2Q6XLA1 102 aa6.85□□□□□ -1.31
RPAIN-212ENST00000573126 A8MWP4 228 aa6.84□□□□□ -1.31
RPAIN-212ENST00000573126 A0A087WTM6 91 aa6.84□□□□□ -1.32
RPAIN-212ENST00000573126 LINC00336Q6ZUF6 198 aa6.83□□□□□ -1.32
RPAIN-212ENST00000573126 LINC00208Q96KT6 92 aa6.83□□□□□ -1.32
RPAIN-212ENST00000573126 TGP01266 2768 aa6.82□□□□□ -1.32
RPAIN-212ENST00000573126 MP68P56378 58 aa6.82□□□□□ -1.32
RPAIN-212ENST00000573126 KRTAP21-3Q3LHN1 58 aa6.81□□□□□ -1.32
RPAIN-212ENST00000573126 C1orf64Q8NEQ6 169 aa6.81□□□□□ -1.32
RPAIN-212ENST00000573126 VPS13DQ5THJ4 4388 aa6.81□□□□□ -1.32
RPAIN-212ENST00000573126 MEGF8Q7Z7M0 2845 aa6.81□□□□□ -1.32
RPAIN-212ENST00000573126 HECTD4Q9Y4D8 3996 aa6.81□□□□□ -1.32
RPAIN-212ENST00000573126 hDV103S1A0JD37 113 aa6.8□□□□□ -1.32
RPAIN-212ENST00000573126 RTL8CO15255 209 aa6.8□□□□□ -1.32
RPAIN-212ENST00000573126 ANAPC11Q9NYG5 84 aa6.8□□□□□ -1.32
RPAIN-212ENST00000573126 PSORS1C2Q9UIG4 136 aa6.79□□□□□ -1.32
RPAIN-212ENST00000573126 H0Y9P7 68 aa6.79□□□□□ -1.32
RPAIN-212ENST00000573126 TRAV22A0A0B4J277 110 aa6.78□□□□□ -1.32
RPAIN-212ENST00000573126 PRO0628Q9UI54 55 aa6.78□□□□□ -1.32
RPAIN-212ENST00000573126 DNAH2Q9P225 4427 aa6.78□□□□□ -1.32
RPAIN-212ENST00000573126 MMP24-AS1A0A0U1RRL7 71 aa6.77□□□□□ -1.33
RPAIN-212ENST00000573126 NDUFB1O75438 58 aa6.77□□□□□ -1.33
RPAIN-212ENST00000573126 MOBPQ13875 183 aa6.77□□□□□ -1.33
RPAIN-212ENST00000573126 Q96NJ1 140 aa6.77□□□□□ -1.33
RPAIN-212ENST00000573126 IGLV5-52A0A0A0MRZ9 124 aa6.76□□□□□ -1.33
RPAIN-212ENST00000573126 LINC00483Q53H64 154 aa6.76□□□□□ -1.33
RPAIN-212ENST00000573126 WWC2-AS2Q96NR7 200 aa6.75□□□□□ -1.33
RPAIN-212ENST00000573126 Q6ZR54 194 aa6.75□□□□□ -1.33
RPAIN-212ENST00000573126 FBN3Q75N90 2809 aa6.74□□□□□ -1.33
RPAIN-212ENST00000573126 CYP4F30PQ9H0H9 118 aa6.74□□□□□ -1.33
RPAIN-212ENST00000573126 DNAH8Q96JB1 4490 aa6.74□□□□□ -1.33
RPAIN-212ENST00000573126 PLAC8Q9NZF1 115 aa6.73□□□□□ -1.33
RPAIN-212ENST00000573126 ZNF706Q9Y5V0 76 aaPredicted RBP6.73□□□□□ -1.33
RPAIN-212ENST00000573126 ZNF861PO60384 105 aa6.72□□□□□ -1.33
RPAIN-212ENST00000573126 BRK1Q8WUW1 75 aa6.72□□□□□ -1.33
RPAIN-212ENST00000573126 IGHV6-1A0A0B4J1U7 121 aa6.71□□□□□ -1.33
RPAIN-212ENST00000573126 DNAH17Q9UFH2 4485 aa6.71□□□□□ -1.33
RPAIN-212ENST00000573126 H3BPC8 53 aa6.7□□□□□ -1.34
RPAIN-212ENST00000573126 C1orf134Q5TEV5 83 aa6.7□□□□□ -1.34
RPAIN-212ENST00000573126 C8orf17Q9NRJ1 99 aa6.7□□□□□ -1.34
RPAIN-212ENST00000573126 DNAH6Q9C0G6 4158 aa6.69□□□□□ -1.34
RPAIN-212ENST00000573126 NDUFS5O43920 106 aa6.68□□□□□ -1.34
RPAIN-212ENST00000573126 LY6G6CO95867 125 aa6.68□□□□□ -1.34
RPAIN-212ENST00000573126 A0A087X002 238 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 ASB16-AS1Q495Z4 193 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 NOTCH2NLQ7Z3S9 236 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 PSPHP1O15172 72 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 CDK2AP2O75956 126 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
RPAIN-212ENST00000573126 Q1T7F1 81 aa6.66□□□□□ -1.34
RPAIN-212ENST00000573126 PCOTHQ58A44 107 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 109.6 ms