RNA–Protein interactions for RNA: ENST00000571409.1

CTDNEP1-206, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-206ENST00000571409 C14orf144Q96I85 54 aa16.47■□□□□ 0.23
CTDNEP1-206ENST00000571409 TCL1BO95988 128 aa16.46■□□□□ 0.23
CTDNEP1-206ENST00000571409 PCOTHQ58A44 107 aa16.46■□□□□ 0.23
CTDNEP1-206ENST00000571409 KRTAP9-2Q9BYQ4 174 aa16.46■□□□□ 0.23
CTDNEP1-206ENST00000571409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP16.45■□□□□ 0.22
CTDNEP1-206ENST00000571409 PAM16Q9Y3D7 125 aa16.45■□□□□ 0.22
CTDNEP1-206ENST00000571409 SPATA45Q537H7 98 aa16.43■□□□□ 0.22
CTDNEP1-206ENST00000571409 Q6JHZ5 121 aa16.43■□□□□ 0.22
CTDNEP1-206ENST00000571409 IGLV8-61A0A075B6I0 122 aa16.42■□□□□ 0.22
CTDNEP1-206ENST00000571409 CFC1BP0CG36 223 aa16.41■□□□□ 0.22
CTDNEP1-206ENST00000571409 CFC1P0CG37 223 aa16.41■□□□□ 0.22
CTDNEP1-206ENST00000571409 CLEC2BQ92478 149 aa16.41■□□□□ 0.22
CTDNEP1-206ENST00000571409 IGFL1Q6UW32 110 aa16.4■□□□□ 0.22
CTDNEP1-206ENST00000571409 HIGD1BQ9P298 99 aa16.4■□□□□ 0.22
CTDNEP1-206ENST00000571409 OCIAD2Q56VL3 154 aa16.39■□□□□ 0.21
CTDNEP1-206ENST00000571409 RAB37Q96AX2 223 aa16.39■□□□□ 0.21
CTDNEP1-206ENST00000571409 PPDPFLQ8WWR9 84 aa16.38■□□□□ 0.21
CTDNEP1-206ENST00000571409 VAMP8Q9BV40 100 aa16.37■□□□□ 0.21
CTDNEP1-206ENST00000571409 TRBV7-7A0A0K0K1E9 115 aa16.35■□□□□ 0.21
CTDNEP1-206ENST00000571409 SNHG12Q9BXW3 62 aa16.35■□□□□ 0.21
CTDNEP1-206ENST00000571409 C2orf91Q6ZV80 131 aa16.34■□□□□ 0.21
CTDNEP1-206ENST00000571409 A0A0B4J2C4 111 aa16.33■□□□□ 0.2
CTDNEP1-206ENST00000571409 H0YGX0 51 aa16.27■□□□□ 0.2
CTDNEP1-206ENST00000571409 H3BUT2 72 aa16.27■□□□□ 0.2
CTDNEP1-206ENST00000571409 RPL37P61927 97 aaKnown RBP16.27■□□□□ 0.2
CTDNEP1-206ENST00000571409 SNCGO76070 127 aa16.26■□□□□ 0.19
CTDNEP1-206ENST00000571409 LCE2CQ5TA81 110 aa16.26■□□□□ 0.19
CTDNEP1-206ENST00000571409 CEND1Q8N111 149 aa16.25■□□□□ 0.19
CTDNEP1-206ENST00000571409 FAM218AQ96MZ4 157 aa16.25■□□□□ 0.19
CTDNEP1-206ENST00000571409 KRTAP19-2Q3LHN2 52 aa16.23■□□□□ 0.19
CTDNEP1-206ENST00000571409 TMEM238LA0A1B0GVL6 79 aa16.2■□□□□ 0.18
CTDNEP1-206ENST00000571409 A6NJY4 79 aa16.2■□□□□ 0.18
CTDNEP1-206ENST00000571409 PRO1854Q9UHT4 67 aa16.19■□□□□ 0.18
CTDNEP1-206ENST00000571409 FXYD2P54710 66 aa16.16■□□□□ 0.18
CTDNEP1-206ENST00000571409 NDUFV3P56181 108 aaKnown RBP16.15■□□□□ 0.18
CTDNEP1-206ENST00000571409 LST1O00453 97 aa16.13■□□□□ 0.17
CTDNEP1-206ENST00000571409 A0A1B0GX51 115 aa16.12■□□□□ 0.17
CTDNEP1-206ENST00000571409 Q6Q795 121 aa16.12■□□□□ 0.17
CTDNEP1-206ENST00000571409 PYY3Q5JQD4 70 aa16.09■□□□□ 0.17
CTDNEP1-206ENST00000571409 OBSCN-AS1Q96MR7 158 aa16.09■□□□□ 0.17
CTDNEP1-206ENST00000571409 TRIAP1O43715 76 aa16.08■□□□□ 0.16
CTDNEP1-206ENST00000571409 TEN1Q86WV5 123 aa16.08■□□□□ 0.16
CTDNEP1-206ENST00000571409 SS18L2Q9UHA2 77 aa16.08■□□□□ 0.16
CTDNEP1-206ENST00000571409 GHRHP01286 108 aa16.07■□□□□ 0.16
CTDNEP1-206ENST00000571409 MT1HP80294 61 aa16.07■□□□□ 0.16
CTDNEP1-206ENST00000571409 FABP2P12104 132 aa16.06■□□□□ 0.16
CTDNEP1-206ENST00000571409 H3BMG7 143 aa16.05■□□□□ 0.16
CTDNEP1-206ENST00000571409 HSD52Q0P140 79 aa16.03■□□□□ 0.16
CTDNEP1-206ENST00000571409 A0A087WSZ3 146 aa16■□□□□ 0.15
CTDNEP1-206ENST00000571409 Q75L30 129 aa15.98■□□□□ 0.15
CTDNEP1-206ENST00000571409 K7ERJ3 54 aa15.97■□□□□ 0.15
CTDNEP1-206ENST00000571409 PSMB2P49721 201 aa15.95■□□□□ 0.14
CTDNEP1-206ENST00000571409 ATP11AUNQ6ZP68 121 aa15.95■□□□□ 0.14
CTDNEP1-206ENST00000571409 DNAL4O96015 105 aa15.94■□□□□ 0.14
CTDNEP1-206ENST00000571409 Q96NJ1 140 aa15.94■□□□□ 0.14
CTDNEP1-206ENST00000571409 LCE2DQ5TA82 110 aaPredicted RBP15.93■□□□□ 0.14
CTDNEP1-206ENST00000571409 COX6B2Q6YFQ2 88 aa15.92■□□□□ 0.14
CTDNEP1-206ENST00000571409 KRTAP9-6A0A140TA67 174 aa15.91■□□□□ 0.14
CTDNEP1-206ENST00000571409 ORMDL1Q9P0S3 153 aa15.91■□□□□ 0.14
CTDNEP1-206ENST00000571409 TMA7Q9Y2S6 64 aaKnown RBP15.91■□□□□ 0.14
CTDNEP1-206ENST00000571409 A0A1W2PNM2 257 aa15.9■□□□□ 0.14
CTDNEP1-206ENST00000571409 COX6CP09669 75 aa15.88■□□□□ 0.13
CTDNEP1-206ENST00000571409 UQCR10Q9UDW1 63 aa15.88■□□□□ 0.13
CTDNEP1-206ENST00000571409 A0A1B0GV72 72 aa15.86■□□□□ 0.13
CTDNEP1-206ENST00000571409 H3BQ85 93 aa15.86■□□□□ 0.13
CTDNEP1-206ENST00000571409 ANKRD29Q8N6D5 301 aa15.84■□□□□ 0.13
CTDNEP1-206ENST00000571409 TMEM256-PLSCR3K7ERE1 68 aa15.82■□□□□ 0.12
CTDNEP1-206ENST00000571409 C20orf166-AS1Q96NR2 134 aa15.82■□□□□ 0.12
CTDNEP1-206ENST00000571409 M0R2T5 61 aa15.8■□□□□ 0.12
CTDNEP1-206ENST00000571409 TRBV7-4A0A0J9YYF1 115 aa15.79■□□□□ 0.12
CTDNEP1-206ENST00000571409 SIGMAR1Q99720 223 aa15.79■□□□□ 0.12
CTDNEP1-206ENST00000571409 A8MUU9 505 aa15.78■□□□□ 0.12
CTDNEP1-206ENST00000571409 DSCR10P59022 87 aa15.77■□□□□ 0.12
CTDNEP1-206ENST00000571409 KRTAP10-6P60371 365 aaPredicted RBP15.77■□□□□ 0.12
CTDNEP1-206ENST00000571409 LORP23490 312 aaPredicted RBP15.76■□□□□ 0.11
CTDNEP1-206ENST00000571409 FLGP20930 4061 aaPredicted RBP15.71■□□□□ 0.11
CTDNEP1-206ENST00000571409 IGKV4-1P06312 121 aa15.71■□□□□ 0.11
CTDNEP1-206ENST00000571409 UBE2V1Q13404 147 aa15.71■□□□□ 0.11
CTDNEP1-206ENST00000571409 TRACP01848 142 aa15.7■□□□□ 0.1
CTDNEP1-206ENST00000571409 CCKP06307 115 aa15.7■□□□□ 0.1
CTDNEP1-206ENST00000571409 SCGB1C2P0DMR2 95 aa15.7■□□□□ 0.1
CTDNEP1-206ENST00000571409 LINC00313P59037 77 aa15.65■□□□□ 0.1
CTDNEP1-206ENST00000571409 DEFB116Q30KQ4 102 aa15.64■□□□□ 0.09
CTDNEP1-206ENST00000571409 LINC00472Q9H8W2 130 aa15.62■□□□□ 0.09
CTDNEP1-206ENST00000571409 VPS25Q9BRG1 176 aa15.59■□□□□ 0.09
CTDNEP1-206ENST00000571409 KRTAP16-1A8MUX0 517 aa15.58■□□□□ 0.08
CTDNEP1-206ENST00000571409 RBM3P98179 157 aaKnown RBP15.58■□□□□ 0.08
CTDNEP1-206ENST00000571409 NOTCH2NLQ7Z3S9 236 aa15.55■□□□□ 0.08
CTDNEP1-206ENST00000571409 DSCR8Q96T75 97 aa15.55■□□□□ 0.08
CTDNEP1-206ENST00000571409 CRCT1Q9UGL9 99 aa15.54■□□□□ 0.08
CTDNEP1-206ENST00000571409 TRBV20-1A0A075B6N2 111 aa15.52■□□□□ 0.08
CTDNEP1-206ENST00000571409 IGHV6-1A0A0B4J1U7 121 aa15.52■□□□□ 0.08
CTDNEP1-206ENST00000571409 BAALC-AS2P0C853 105 aa15.52■□□□□ 0.08
CTDNEP1-206ENST00000571409 FSIP2Q5CZC0 6907 aa15.48■□□□□ 0.07
CTDNEP1-206ENST00000571409 M0R143 59 aa15.46■□□□□ 0.07
CTDNEP1-206ENST00000571409 C9JAW5 83 aa15.45■□□□□ 0.06
CTDNEP1-206ENST00000571409 NAA38Q9BRA0 125 aaKnown RBP15.44■□□□□ 0.06
CTDNEP1-206ENST00000571409 A0A1B0GVX0 72 aa15.41■□□□□ 0.06
CTDNEP1-206ENST00000571409 ATXN8Q156A1 80 aa15.4■□□□□ 0.06
CTDNEP1-206ENST00000571409 C8orf87E5RJ46 101 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms