RNA–Protein interactions for RNA: ENST00000569687.1

SF3B3-213, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 333 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-213ENST00000569687 SPRR1BP22528 89 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 UBE2BP63146 152 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 KRTAP19-4Q3LI73 84 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 C3orf22Q8N5N4 141 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 ST20-AS1Q8NBB2 130 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 SPRR4Q96PI1 79 aa3.36□□□□□ -1.87
SF3B3-213ENST00000569687 A0A1W2PNM2 257 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 UQCRQO14949 82 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 COX7CP15954 63 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 HAMPP81172 84 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 FAM19A1Q7Z5A9 133 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 SACSQ9NZJ4 4579 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 TGP01266 2768 aa3.35□□□□□ -1.87
SF3B3-213ENST00000569687 A0A087WVE0 104 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 LY6G6CO95867 125 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 CHTF8P0CG12 524 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 CRYGAP11844 174 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 FUSP35637 526 aaKnown RBP eCLIP3.34□□□□□ -1.87
SF3B3-213ENST00000569687 NREPQ16612 68 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 C1orf137Q5JT78 98 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 PHF5AQ7RTV0 110 aaKnown RBP3.34□□□□□ -1.87
SF3B3-213ENST00000569687 KRTAP13-1Q8IUC0 172 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 KRTAP11-1Q8IUC1 163 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 SERP2Q8N6R1 65 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 Q8NBF4 154 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 MPLKIPQ8TAP9 179 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 SPACA4Q8TDM5 124 aa3.34□□□□□ -1.87
SF3B3-213ENST00000569687 PANO1I0J062 215 aa3.33□□□□□ -1.88
SF3B3-213ENST00000569687 C1orf134Q5TEV5 83 aa3.33□□□□□ -1.88
SF3B3-213ENST00000569687 SMIM20Q8N5G0 67 aa3.33□□□□□ -1.88
SF3B3-213ENST00000569687 DNAH11Q96DT5 4516 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 DNAH8Q96JB1 4490 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 PRLHP81277 87 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 DPH3Q96FX2 82 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 PLAC8Q9NZF1 115 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 FAT2Q9NYQ8 4349 aa3.32□□□□□ -1.88
SF3B3-213ENST00000569687 TRAV7A0A075B6U4 112 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 IGLV5-52A0A0A0MRZ9 124 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 F8WEM9 126 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 BPY2O14599 106 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 RTL8CO15255 209 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 IGFL1Q6UW32 110 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 PRR26Q8N8Z3 221 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 HIGD2AQ9BW72 106 aa3.31□□□□□ -1.88
SF3B3-213ENST00000569687 UBE2AP49459 152 aa3.3□□□□□ -1.88
SF3B3-213ENST00000569687 RPL37AP61513 92 aaKnown RBP3.3□□□□□ -1.88
SF3B3-213ENST00000569687 DNAH5Q8TE73 4624 aa3.3□□□□□ -1.88
SF3B3-213ENST00000569687 IGKV4-1P06312 121 aa3.29□□□□□ -1.88
SF3B3-213ENST00000569687 LINC00483Q53H64 154 aa3.29□□□□□ -1.88
SF3B3-213ENST00000569687 C9orf153Q5TBE3 101 aa3.29□□□□□ -1.88
SF3B3-213ENST00000569687 PKD1P98161 4303 aa3.29□□□□□ -1.88
SF3B3-213ENST00000569687 RYR2Q92736 4967 aa3.29□□□□□ -1.88
SF3B3-213ENST00000569687 DSCR10P59022 87 aa3.28□□□□□ -1.88
SF3B3-213ENST00000569687 SCXQ7RTU7 201 aa3.28□□□□□ -1.88
SF3B3-213ENST00000569687 ZNF706Q9Y5V0 76 aaPredicted RBP3.28□□□□□ -1.88
SF3B3-213ENST00000569687 SRRM2Q9UQ35 2752 aaKnown RBP3.28□□□□□ -1.89
SF3B3-213ENST00000569687 KMT2CQ8NEZ4 4911 aaKnown RBP3.27□□□□□ -1.89
SF3B3-213ENST00000569687 ZNF861PO60384 105 aa3.27□□□□□ -1.89
SF3B3-213ENST00000569687 PSORS1C2Q9UIG4 136 aa3.27□□□□□ -1.89
SF3B3-213ENST00000569687 LCE6AA0A183 80 aa3.26□□□□□ -1.89
SF3B3-213ENST00000569687 LINC00472Q9H8W2 130 aa3.26□□□□□ -1.89
SF3B3-213ENST00000569687 A0A087WSZ3 146 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 A0A0G2JQZ4 141 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 RPS28P62857 69 aaKnown RBP3.25□□□□□ -1.89
SF3B3-213ENST00000569687 KLKP1Q107X0 134 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 Q8N9L7 120 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 SS18L2Q9UHA2 77 aa3.25□□□□□ -1.89
SF3B3-213ENST00000569687 J3KT08 172 aa3.24□□□□□ -1.89
SF3B3-213ENST00000569687 IGLV7-43P04211 117 aa3.24□□□□□ -1.89
SF3B3-213ENST00000569687 TMEM258P61165 79 aa3.24□□□□□ -1.89
SF3B3-213ENST00000569687 Q6ZSA8 131 aa3.24□□□□□ -1.89
SF3B3-213ENST00000569687 Q8N1X5 172 aa3.24□□□□□ -1.89
SF3B3-213ENST00000569687 IGLV9-49A0A0B4J1Y8 123 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 NDUFC1O43677 76 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 KRTAP10-2P60368 255 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 XP32Q5T750 250 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 C20orf197Q8N268 126 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 CYSTM1Q9H1C7 97 aa3.23□□□□□ -1.89
SF3B3-213ENST00000569687 LRP1BQ9NZR2 4599 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 A8MWP4 228 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 KRTAP29-1A8MX34 341 aaPredicted RBP3.22□□□□□ -1.89
SF3B3-213ENST00000569687 HCG22E2RYF7 251 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 K7EQZ3 153 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 CD164Q04900 197 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 PRR15Q8IV56 129 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 CIRBP-AS1Q8TBR5 109 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 PKHD1P08F94 4074 aa3.22□□□□□ -1.89
SF3B3-213ENST00000569687 RYR3Q15413 4870 aa3.21□□□□□ -1.89
SF3B3-213ENST00000569687 H7BZZ5 65 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 CDK2AP2O75956 126 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 KRTAP10-1P60331 282 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 C5orf47Q569G3 176 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 LINC00336Q6ZUF6 198 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 SSBP3-AS1Q7Z2R9 100 aa3.21□□□□□ -1.9
SF3B3-213ENST00000569687 DYNC1H1Q14204 4646 aaKnown RBP3.21□□□□□ -1.9
SF3B3-213ENST00000569687 A0A0U1RQV1 116 aa3.2□□□□□ -1.9
SF3B3-213ENST00000569687 TMEM254Q8TBM7 123 aa3.2□□□□□ -1.9
SF3B3-213ENST00000569687 Q96NJ1 140 aa3.2□□□□□ -1.9
SF3B3-213ENST00000569687 NDUFB1O75438 58 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms