RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 SEC61BP60468 96 aaKnown RBP4.38□□□□□ -1.71
CNOT1-216ENST00000569240 F8P00451 2351 aa4.38□□□□□ -1.71
CNOT1-216ENST00000569240 TLN2Q9Y4G6 2542 aa4.37□□□□□ -1.71
CNOT1-216ENST00000569240 CFAP54Q96N23 3096 aa4.37□□□□□ -1.71
CNOT1-216ENST00000569240 PKD1L2Q7Z442 2459 aa4.37□□□□□ -1.71
CNOT1-216ENST00000569240 PSORS1C2Q9UIG4 136 aa4.37□□□□□ -1.71
CNOT1-216ENST00000569240 PIEZO1Q92508 2521 aa4.36□□□□□ -1.71
CNOT1-216ENST00000569240 Q8N1X5 172 aa4.36□□□□□ -1.71
CNOT1-216ENST00000569240 KRTAP10-9P60411 292 aa4.36□□□□□ -1.71
CNOT1-216ENST00000569240 KRTAP26-1Q6PEX3 210 aa4.36□□□□□ -1.71
CNOT1-216ENST00000569240 BDP1A6H8Y1 2624 aa4.36□□□□□ -1.71
CNOT1-216ENST00000569240 A0A087WTM6 91 aa4.35□□□□□ -1.71
CNOT1-216ENST00000569240 KRTAP4-16G5E9R7 235 aaPredicted RBP4.35□□□□□ -1.71
CNOT1-216ENST00000569240 NCOR2Q9Y618 2525 aa4.35□□□□□ -1.71
CNOT1-216ENST00000569240 Q8NDZ9 215 aa4.34□□□□□ -1.71
CNOT1-216ENST00000569240 A0A0G2JQZ4 141 aa4.33□□□□□ -1.72
CNOT1-216ENST00000569240 ABCA12Q86UK0 2595 aa4.33□□□□□ -1.72
CNOT1-216ENST00000569240 BOD1L1Q8NFC6 3051 aa4.33□□□□□ -1.72
CNOT1-216ENST00000569240 DOPEY1Q5JWR5 2465 aa4.33□□□□□ -1.72
CNOT1-216ENST00000569240 USP9YO00507 2555 aaPredicted RBP4.33□□□□□ -1.72
CNOT1-216ENST00000569240 A0A0D9SG42 100 aa4.32□□□□□ -1.72
CNOT1-216ENST00000569240 CR1P17927 2039 aa4.32□□□□□ -1.72
CNOT1-216ENST00000569240 ANAPC11Q9NYG5 84 aa4.32□□□□□ -1.72
CNOT1-216ENST00000569240 MUC3AQ02505 3323 aa4.32□□□□□ -1.72
CNOT1-216ENST00000569240 CUBNO60494 3623 aa4.31□□□□□ -1.72
CNOT1-216ENST00000569240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.31□□□□□ -1.72
CNOT1-216ENST00000569240 PLAC8Q9NZF1 115 aa4.3□□□□□ -1.72
CNOT1-216ENST00000569240 CSMD2Q7Z408 3487 aa4.3□□□□□ -1.72
CNOT1-216ENST00000569240 PIEZO2Q9H5I5 2752 aa4.29□□□□□ -1.72
CNOT1-216ENST00000569240 PANO1I0J062 215 aa4.29□□□□□ -1.72
CNOT1-216ENST00000569240 WWC2-AS2Q96NR7 200 aa4.27□□□□□ -1.73
CNOT1-216ENST00000569240 S4R3F8 94 aa4.25□□□□□ -1.73
CNOT1-216ENST00000569240 LRRK2Q5S007 2527 aa4.25□□□□□ -1.73
CNOT1-216ENST00000569240 IGF2RP11717 2491 aa4.25□□□□□ -1.73
CNOT1-216ENST00000569240 SVEP1Q4LDE5 3571 aa4.24□□□□□ -1.73
CNOT1-216ENST00000569240 RPS29P62273 56 aaKnown RBP4.24□□□□□ -1.73
CNOT1-216ENST00000569240 FRYQ5TBA9 3013 aa4.24□□□□□ -1.73
CNOT1-216ENST00000569240 ACANP16112 2415 aa4.23□□□□□ -1.73
CNOT1-216ENST00000569240 CHD7Q9P2D1 2997 aa4.23□□□□□ -1.73
CNOT1-216ENST00000569240 PRUNE2Q8WUY3 3088 aa4.23□□□□□ -1.73
CNOT1-216ENST00000569240 CHD8Q9HCK8 2581 aa4.23□□□□□ -1.73
CNOT1-216ENST00000569240 CASC10Q5T4H9 136 aa4.22□□□□□ -1.73
CNOT1-216ENST00000569240 SMR3AQ99954 134 aa4.22□□□□□ -1.73
CNOT1-216ENST00000569240 M0QZ58 72 aa4.21□□□□□ -1.74
CNOT1-216ENST00000569240 KRTAP11-1Q8IUC1 163 aa4.2□□□□□ -1.74
CNOT1-216ENST00000569240 NDUFAF8A1L188 74 aa4.2□□□□□ -1.74
CNOT1-216ENST00000569240 C20orf166-AS1Q96NR2 134 aa4.2□□□□□ -1.74
CNOT1-216ENST00000569240 ATMQ13315 3056 aa4.19□□□□□ -1.74
CNOT1-216ENST00000569240 SETD2Q9BYW2 2564 aaPredicted RBP4.19□□□□□ -1.74
CNOT1-216ENST00000569240 C9orf92A6NGG3 77 aa4.19□□□□□ -1.74
CNOT1-216ENST00000569240 K7EIL1 84 aa4.18□□□□□ -1.74
CNOT1-216ENST00000569240 KRTAP10-11P60412 298 aa4.18□□□□□ -1.74
CNOT1-216ENST00000569240 PP632Q6XCG6 107 aa4.18□□□□□ -1.74
CNOT1-216ENST00000569240 KRTAP24-1Q3LI83 254 aa4.17□□□□□ -1.74
CNOT1-216ENST00000569240 JMJD1CQ15652 2540 aa4.17□□□□□ -1.74
CNOT1-216ENST00000569240 R4GN34 69 aa4.16□□□□□ -1.74
CNOT1-216ENST00000569240 A8MUU9 505 aa4.16□□□□□ -1.74
CNOT1-216ENST00000569240 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.74
CNOT1-216ENST00000569240 Q6ZSA8 131 aa4.14□□□□□ -1.75
CNOT1-216ENST00000569240 ZFYVE26Q68DK2 2539 aa4.13□□□□□ -1.75
CNOT1-216ENST00000569240 VPS13CQ709C8 3753 aa4.13□□□□□ -1.75
CNOT1-216ENST00000569240 KRTAP10-3P60369 221 aa4.13□□□□□ -1.75
CNOT1-216ENST00000569240 MTORP42345 2549 aa4.13□□□□□ -1.75
CNOT1-216ENST00000569240 ANKRD17O75179 2603 aaKnown RBP4.13□□□□□ -1.75
CNOT1-216ENST00000569240 ANKRD11Q6UB99 2663 aaPredicted RBP4.13□□□□□ -1.75
CNOT1-216ENST00000569240 PLAC4Q8WY50 150 aa4.12□□□□□ -1.75
CNOT1-216ENST00000569240 A8MU10 97 aa4.11□□□□□ -1.75
CNOT1-216ENST00000569240 CEP295Q9C0D2 2601 aa4.09□□□□□ -1.75
CNOT1-216ENST00000569240 KRTAP1-3Q8IUG1 177 aa4.08□□□□□ -1.76
CNOT1-216ENST00000569240 POLQO75417 2590 aa4.08□□□□□ -1.76
CNOT1-216ENST00000569240 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
CNOT1-216ENST00000569240 KRTAP1-1Q07627 177 aa4.08□□□□□ -1.76
CNOT1-216ENST00000569240 WDR87Q6ZQQ6 2873 aa4.05□□□□□ -1.76
CNOT1-216ENST00000569240 NBPF19A0A087WUL8 3843 aa4.04□□□□□ -1.76
CNOT1-216ENST00000569240 KALRNO60229 2985 aa4.04□□□□□ -1.76
CNOT1-216ENST00000569240 DMXL2Q8TDJ6 3036 aa4.03□□□□□ -1.76
CNOT1-216ENST00000569240 P0C880 135 aa4.02□□□□□ -1.77
CNOT1-216ENST00000569240 FASNP49327 2511 aaKnown RBP4.01□□□□□ -1.77
CNOT1-216ENST00000569240 AKAP9Q99996 3911 aa4□□□□□ -1.77
CNOT1-216ENST00000569240 CSMD3Q7Z407 3707 aa3.98□□□□□ -1.77
CNOT1-216ENST00000569240 J3QL48 77 aa3.97□□□□□ -1.77
CNOT1-216ENST00000569240 KRTAP7-1Q8IUC3 87 aa3.96□□□□□ -1.77
CNOT1-216ENST00000569240 KRTAP1-5Q9BYS1 174 aa3.96□□□□□ -1.78
CNOT1-216ENST00000569240 DMXL1Q9Y485 3027 aa3.95□□□□□ -1.78
CNOT1-216ENST00000569240 TNP1P09430 55 aa3.95□□□□□ -1.78
CNOT1-216ENST00000569240 H0YAA0 97 aa3.94□□□□□ -1.78
CNOT1-216ENST00000569240 TNRC18O15417 2968 aaPredicted RBP3.94□□□□□ -1.78
CNOT1-216ENST00000569240 SPTBN4Q9H254 2564 aa3.93□□□□□ -1.78
CNOT1-216ENST00000569240 ADGRG4Q8IZF6 3080 aa3.93□□□□□ -1.78
CNOT1-216ENST00000569240 Q6ZRN7 208 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-216ENST00000569240 DMBT1Q9UGM3 2413 aaPredicted RBP3.92□□□□□ -1.78
CNOT1-216ENST00000569240 EPG5Q9HCE0 2579 aa3.91□□□□□ -1.78
CNOT1-216ENST00000569240 COL12A1Q99715 3063 aa3.91□□□□□ -1.78
CNOT1-216ENST00000569240 DSPP15924 2871 aaKnown RBP3.9□□□□□ -1.79
CNOT1-216ENST00000569240 SMR3BP02814 79 aaPredicted RBP3.89□□□□□ -1.79
CNOT1-216ENST00000569240 FLG2Q5D862 2391 aaPredicted RBP3.87□□□□□ -1.79
CNOT1-216ENST00000569240 NBEAQ8NFP9 2946 aa3.86□□□□□ -1.79
CNOT1-216ENST00000569240 KRTAP13-3Q3SY46 172 aa3.86□□□□□ -1.79
CNOT1-216ENST00000569240 CENPEQ02224 2701 aa3.85□□□□□ -1.79
CNOT1-216ENST00000569240 KRTAP13-2Q52LG2 175 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms