RNA–Protein interactions for RNA: ENST00000569035.5

NEIL1-221, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEIL1, Length 1,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-221ENST00000569035 SPRR4Q96PI1 79 aa11.09□□□□□ -0.63
NEIL1-221ENST00000569035 A0A087WVE0 104 aa11.08□□□□□ -0.64
NEIL1-221ENST00000569035 ST20-AS1Q8NBB2 130 aa11.08□□□□□ -0.64
NEIL1-221ENST00000569035 IGLV8-61A0A075B6I0 122 aa11.08□□□□□ -0.64
NEIL1-221ENST00000569035 ERC2-IT1O76042 136 aa11.08□□□□□ -0.64
NEIL1-221ENST00000569035 SPRR1BP22528 89 aa11.07□□□□□ -0.64
NEIL1-221ENST00000569035 C9orf153Q5TBE3 101 aa11.06□□□□□ -0.64
NEIL1-221ENST00000569035 PHF5AQ7RTV0 110 aaKnown RBP11.05□□□□□ -0.64
NEIL1-221ENST00000569035 CHTF8P0CG12 524 aa11.05□□□□□ -0.64
NEIL1-221ENST00000569035 CRYGAP11844 174 aa11.05□□□□□ -0.64
NEIL1-221ENST00000569035 UBE2AP49459 152 aa11.05□□□□□ -0.64
NEIL1-221ENST00000569035 SPACA4Q8TDM5 124 aa11.05□□□□□ -0.64
NEIL1-221ENST00000569035 DPH3Q96FX2 82 aa11.04□□□□□ -0.64
NEIL1-221ENST00000569035 HIGD2AQ9BW72 106 aa11.04□□□□□ -0.64
NEIL1-221ENST00000569035 BPY2O14599 106 aa11.03□□□□□ -0.64
NEIL1-221ENST00000569035 PRLHP81277 87 aa11.03□□□□□ -0.64
NEIL1-221ENST00000569035 SMIM29Q86T20 159 aa11.03□□□□□ -0.64
NEIL1-221ENST00000569035 DNAH5Q8TE73 4624 aa11.03□□□□□ -0.64
NEIL1-221ENST00000569035 PKD1P98161 4303 aa11.01□□□□□ -0.65
NEIL1-221ENST00000569035 A0A1W2PNM2 257 aa11.01□□□□□ -0.65
NEIL1-221ENST00000569035 EPPK1P58107 5090 aaKnown RBP11.01□□□□□ -0.65
NEIL1-221ENST00000569035 TRAV7A0A075B6U4 112 aa10.98□□□□□ -0.65
NEIL1-221ENST00000569035 ZNF706Q9Y5V0 76 aaPredicted RBP10.95□□□□□ -0.66
NEIL1-221ENST00000569035 KRTAP13-1Q8IUC0 172 aa10.95□□□□□ -0.66
NEIL1-221ENST00000569035 RPL37AP61513 92 aaKnown RBP10.94□□□□□ -0.66
NEIL1-221ENST00000569035 IGFL1Q6UW32 110 aa10.94□□□□□ -0.66
NEIL1-221ENST00000569035 PLAC8Q9NZF1 115 aa10.94□□□□□ -0.66
NEIL1-221ENST00000569035 IGLV5-52A0A0A0MRZ9 124 aa10.93□□□□□ -0.66
NEIL1-221ENST00000569035 KRTAP10-2P60368 255 aa10.93□□□□□ -0.66
NEIL1-221ENST00000569035 SS18L2Q9UHA2 77 aa10.92□□□□□ -0.66
NEIL1-221ENST00000569035 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.92□□□□□ -0.66
NEIL1-221ENST00000569035 IGKV4-1P06312 121 aa10.91□□□□□ -0.66
NEIL1-221ENST00000569035 KRTAP11-1Q8IUC1 163 aa10.91□□□□□ -0.66
NEIL1-221ENST00000569035 SCXQ7RTU7 201 aa10.9□□□□□ -0.66
NEIL1-221ENST00000569035 PKHD1P08F94 4074 aa10.9□□□□□ -0.66
NEIL1-221ENST00000569035 LINC00336Q6ZUF6 198 aa10.9□□□□□ -0.67
NEIL1-221ENST00000569035 PANO1I0J062 215 aa10.89□□□□□ -0.67
NEIL1-221ENST00000569035 DNAH8Q96JB1 4490 aa10.89□□□□□ -0.67
NEIL1-221ENST00000569035 TMEM258P61165 79 aa10.87□□□□□ -0.67
NEIL1-221ENST00000569035 LINC00483Q53H64 154 aa10.85□□□□□ -0.67
NEIL1-221ENST00000569035 LRP1BQ9NZR2 4599 aa10.84□□□□□ -0.67
NEIL1-221ENST00000569035 BIRC6Q9NR09 4857 aa10.83□□□□□ -0.68
NEIL1-221ENST00000569035 DYNC1H1Q14204 4646 aaKnown RBP10.82□□□□□ -0.68
NEIL1-221ENST00000569035 A0A087WSZ3 146 aa10.81□□□□□ -0.68
NEIL1-221ENST00000569035 NDUFC1O43677 76 aa10.81□□□□□ -0.68
NEIL1-221ENST00000569035 ZNF861PO60384 105 aa10.81□□□□□ -0.68
NEIL1-221ENST00000569035 KLKP1Q107X0 134 aa10.81□□□□□ -0.68
NEIL1-221ENST00000569035 A0A1B0GVY2 172 aa10.8□□□□□ -0.68
NEIL1-221ENST00000569035 PSORS1C2Q9UIG4 136 aa10.8□□□□□ -0.68
NEIL1-221ENST00000569035 J3KT08 172 aa10.79□□□□□ -0.68
NEIL1-221ENST00000569035 DSCR10P59022 87 aa10.79□□□□□ -0.68
NEIL1-221ENST00000569035 KRTAP10-1P60331 282 aa10.78□□□□□ -0.68
NEIL1-221ENST00000569035 C20orf197Q8N268 126 aa10.77□□□□□ -0.68
NEIL1-221ENST00000569035 Q8N9L7 120 aa10.77□□□□□ -0.68
NEIL1-221ENST00000569035 FAM30AQ9NZY2 134 aa10.76□□□□□ -0.69
NEIL1-221ENST00000569035 OCR1Q9BZK8 76 aa10.75□□□□□ -0.69
NEIL1-221ENST00000569035 HCG22E2RYF7 251 aa10.72□□□□□ -0.69
NEIL1-221ENST00000569035 RPS28P62857 69 aaKnown RBP10.72□□□□□ -0.69
NEIL1-221ENST00000569035 K7EQZ3 153 aa10.72□□□□□ -0.69
NEIL1-221ENST00000569035 IGLV7-43P04211 117 aa10.7□□□□□ -0.7
NEIL1-221ENST00000569035 LINC00472Q9H8W2 130 aa10.7□□□□□ -0.7
NEIL1-221ENST00000569035 Q6ZSA8 131 aa10.69□□□□□ -0.7
NEIL1-221ENST00000569035 A8MWP4 228 aa10.68□□□□□ -0.7
NEIL1-221ENST00000569035 TMEM254Q8TBM7 123 aa10.68□□□□□ -0.7
NEIL1-221ENST00000569035 APOBP04114 4563 aaKnown RBP10.68□□□□□ -0.7
NEIL1-221ENST00000569035 NDUFB1O75438 58 aa10.67□□□□□ -0.7
NEIL1-221ENST00000569035 ATP5EP56381 51 aaPredicted RBP10.67□□□□□ -0.7
NEIL1-221ENST00000569035 IGLV9-49A0A0B4J1Y8 123 aa10.67□□□□□ -0.7
NEIL1-221ENST00000569035 A0A0G2JQZ4 141 aa10.67□□□□□ -0.7
NEIL1-221ENST00000569035 CIRBP-AS1Q8TBR5 109 aa10.67□□□□□ -0.7
NEIL1-221ENST00000569035 PRR15Q8IV56 129 aa10.65□□□□□ -0.7
NEIL1-221ENST00000569035 C5orf47Q569G3 176 aa10.65□□□□□ -0.71
NEIL1-221ENST00000569035 H7BZZ5 65 aa10.64□□□□□ -0.71
NEIL1-221ENST00000569035 CYSTM1Q9H1C7 97 aa10.64□□□□□ -0.71
NEIL1-221ENST00000569035 CD164Q04900 197 aa10.62□□□□□ -0.71
NEIL1-221ENST00000569035 FAM236DA0A1B0GTK5 79 aa10.62□□□□□ -0.71
NEIL1-221ENST00000569035 FAM236CP0DP71 79 aa10.62□□□□□ -0.71
NEIL1-221ENST00000569035 SSBP3-AS1Q7Z2R9 100 aa10.61□□□□□ -0.71
NEIL1-221ENST00000569035 A0A0U1RQV1 116 aa10.6□□□□□ -0.71
NEIL1-221ENST00000569035 MOBPQ13875 183 aa10.6□□□□□ -0.71
NEIL1-221ENST00000569035 SNURFQ9Y675 71 aa10.59□□□□□ -0.71
NEIL1-221ENST00000569035 CASC2Q6XLA1 102 aa10.57□□□□□ -0.72
NEIL1-221ENST00000569035 KRTAP29-1A8MX34 341 aaPredicted RBP10.57□□□□□ -0.72
NEIL1-221ENST00000569035 DEFB116Q30KQ4 102 aa10.57□□□□□ -0.72
NEIL1-221ENST00000569035 FAT1Q14517 4588 aa10.56□□□□□ -0.72
NEIL1-221ENST00000569035 H3BPC8 53 aa10.56□□□□□ -0.72
NEIL1-221ENST00000569035 VPS13BQ7Z7G8 4022 aa10.55□□□□□ -0.72
NEIL1-221ENST00000569035 CDK2AP2O75956 126 aa10.54□□□□□ -0.72
NEIL1-221ENST00000569035 KIAA1109Q2LD37 5005 aa10.54□□□□□ -0.72
NEIL1-221ENST00000569035 MP68P56378 58 aa10.54□□□□□ -0.72
NEIL1-221ENST00000569035 FAM229BQ4G0N7 80 aa10.54□□□□□ -0.72
NEIL1-221ENST00000569035 SVIPQ8NHG7 77 aa10.54□□□□□ -0.72
NEIL1-221ENST00000569035 WFDC13Q8IUB5 93 aa10.52□□□□□ -0.72
NEIL1-221ENST00000569035 SERP1Q9Y6X1 66 aa10.52□□□□□ -0.73
NEIL1-221ENST00000569035 Q96NJ1 140 aa10.51□□□□□ -0.73
NEIL1-221ENST00000569035 HERC2O95714 4834 aa10.51□□□□□ -0.73
NEIL1-221ENST00000569035 ASB16-AS1Q495Z4 193 aa10.49□□□□□ -0.73
NEIL1-221ENST00000569035 HSPG2P98160 4391 aa10.49□□□□□ -0.73
NEIL1-221ENST00000569035 TP53AIP1Q9HCN2 124 aa10.49□□□□□ -0.73
NEIL1-221ENST00000569035 SMR3BP02814 79 aaPredicted RBP10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms