RNA–Protein interactions for RNA: ENST00000566290.5

RAB40C-210, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 753 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-210ENST00000566290 A0A1B0GW54 56 aa10.47□□□□□ -0.73
RAB40C-210ENST00000566290 Q8N377 158 aa10.46□□□□□ -0.73
RAB40C-210ENST00000566290 SMCR5Q8TEV8 140 aa10.46□□□□□ -0.73
RAB40C-210ENST00000566290 PLAC8Q9NZF1 115 aa10.46□□□□□ -0.73
RAB40C-210ENST00000566290 HMCN2Q8NDA2 5059 aa10.46□□□□□ -0.74
RAB40C-210ENST00000566290 KRTAP10-1P60331 282 aa10.45□□□□□ -0.74
RAB40C-210ENST00000566290 UBE2BP63146 152 aa10.44□□□□□ -0.74
RAB40C-210ENST00000566290 PHF5AQ7RTV0 110 aaKnown RBP10.44□□□□□ -0.74
RAB40C-210ENST00000566290 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.44□□□□□ -0.74
RAB40C-210ENST00000566290 IGLV5-52A0A0A0MRZ9 124 aa10.43□□□□□ -0.74
RAB40C-210ENST00000566290 PANO1I0J062 215 aa10.43□□□□□ -0.74
RAB40C-210ENST00000566290 ATP5EP2Q5VTU8 51 aa10.43□□□□□ -0.74
RAB40C-210ENST00000566290 Q6JHZ5 121 aa10.43□□□□□ -0.74
RAB40C-210ENST00000566290 BCE1O60756 84 aa10.42□□□□□ -0.74
RAB40C-210ENST00000566290 SPRR1BP22528 89 aa10.42□□□□□ -0.74
RAB40C-210ENST00000566290 FAM19A1Q7Z5A9 133 aa10.42□□□□□ -0.74
RAB40C-210ENST00000566290 KRTAP13-1Q8IUC0 172 aa10.42□□□□□ -0.74
RAB40C-210ENST00000566290 LINC00846Q9NV44 126 aa10.42□□□□□ -0.74
RAB40C-210ENST00000566290 Q5VSD8 79 aa10.41□□□□□ -0.74
RAB40C-210ENST00000566290 DNAH8Q96JB1 4490 aa10.39□□□□□ -0.75
RAB40C-210ENST00000566290 ERC2-IT1O76042 136 aa10.39□□□□□ -0.75
RAB40C-210ENST00000566290 IGLV8-61A0A075B6I0 122 aa10.38□□□□□ -0.75
RAB40C-210ENST00000566290 KRTAP11-1Q8IUC1 163 aa10.38□□□□□ -0.75
RAB40C-210ENST00000566290 J3QL48 77 aa10.37□□□□□ -0.75
RAB40C-210ENST00000566290 PCP4P48539 62 aa10.37□□□□□ -0.75
RAB40C-210ENST00000566290 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
RAB40C-210ENST00000566290 HAMPP81172 84 aa10.36□□□□□ -0.75
RAB40C-210ENST00000566290 PRLHP81277 87 aa10.35□□□□□ -0.75
RAB40C-210ENST00000566290 ST20-AS1Q8NBB2 130 aa10.35□□□□□ -0.75
RAB40C-210ENST00000566290 SMIM29Q86T20 159 aa10.34□□□□□ -0.75
RAB40C-210ENST00000566290 FAM30AQ9NZY2 134 aa10.34□□□□□ -0.75
RAB40C-210ENST00000566290 A0A1B0GV72 72 aa10.33□□□□□ -0.76
RAB40C-210ENST00000566290 UBE2AP49459 152 aa10.33□□□□□ -0.76
RAB40C-210ENST00000566290 Q6ZSA8 131 aa10.33□□□□□ -0.76
RAB40C-210ENST00000566290 DEFB105AQ8NG35 78 aa10.32□□□□□ -0.76
RAB40C-210ENST00000566290 DPH3Q96FX2 82 aa10.32□□□□□ -0.76
RAB40C-210ENST00000566290 HIGD2AQ9BW72 106 aa10.32□□□□□ -0.76
RAB40C-210ENST00000566290 F8WEM9 126 aa10.3□□□□□ -0.76
RAB40C-210ENST00000566290 SMR3BP02814 79 aaPredicted RBP10.3□□□□□ -0.76
RAB40C-210ENST00000566290 SPRR4Q96PI1 79 aa10.3□□□□□ -0.76
RAB40C-210ENST00000566290 C1orf137Q5JT78 98 aa10.29□□□□□ -0.76
RAB40C-210ENST00000566290 Q8NBF4 154 aa10.29□□□□□ -0.76
RAB40C-210ENST00000566290 CXCL6P80162 114 aa10.28□□□□□ -0.76
RAB40C-210ENST00000566290 Q6ZVQ6 151 aa10.28□□□□□ -0.76
RAB40C-210ENST00000566290 ZNF706Q9Y5V0 76 aaPredicted RBP10.27□□□□□ -0.77
RAB40C-210ENST00000566290 LINC00483Q53H64 154 aa10.26□□□□□ -0.77
RAB40C-210ENST00000566290 PSORS1C2Q9UIG4 136 aa10.26□□□□□ -0.77
RAB40C-210ENST00000566290 RPL37AP61513 92 aaKnown RBP10.25□□□□□ -0.77
RAB40C-210ENST00000566290 C3orf22Q8N5N4 141 aa10.24□□□□□ -0.77
RAB40C-210ENST00000566290 A0A1W2PNM2 257 aa10.23□□□□□ -0.77
RAB40C-210ENST00000566290 CRYGAP11844 174 aa10.23□□□□□ -0.77
RAB40C-210ENST00000566290 HIST1H4AP62805 103 aaKnown RBP10.23□□□□□ -0.77
RAB40C-210ENST00000566290 ZNF861PO60384 105 aa10.22□□□□□ -0.77
RAB40C-210ENST00000566290 LRP1Q07954 4544 aaKnown RBP10.21□□□□□ -0.77
RAB40C-210ENST00000566290 KRTAP29-1A8MX34 341 aaPredicted RBP10.2□□□□□ -0.78
RAB40C-210ENST00000566290 FAM229AH3BQW9 127 aa10.19□□□□□ -0.78
RAB40C-210ENST00000566290 IGFL1Q6UW32 110 aa10.19□□□□□ -0.78
RAB40C-210ENST00000566290 CIRBP-AS1Q8TBR5 109 aa10.19□□□□□ -0.78
RAB40C-210ENST00000566290 SCXQ7RTU7 201 aa10.18□□□□□ -0.78
RAB40C-210ENST00000566290 RNF213Q63HN8 5207 aa10.18□□□□□ -0.78
RAB40C-210ENST00000566290 IGKV3D-7A0A0C4DH55 119 aa10.17□□□□□ -0.78
RAB40C-210ENST00000566290 IGLV7-43P04211 117 aa10.17□□□□□ -0.78
RAB40C-210ENST00000566290 NREPQ16612 68 aa10.16□□□□□ -0.78
RAB40C-210ENST00000566290 FAM236AA0A1B0GUQ0 79 aa10.15□□□□□ -0.78
RAB40C-210ENST00000566290 FAM236BA0A1B0GV22 79 aa10.15□□□□□ -0.78
RAB40C-210ENST00000566290 ANAPC13Q9BS18 74 aa10.13□□□□□ -0.79
RAB40C-210ENST00000566290 FAT3Q8TDW7 4589 aa10.13□□□□□ -0.79
RAB40C-210ENST00000566290 ATOX1O00244 68 aa10.12□□□□□ -0.79
RAB40C-210ENST00000566290 BPY2O14599 106 aa10.08□□□□□ -0.8
RAB40C-210ENST00000566290 KRTAP10-4P60372 401 aaPredicted RBP10.07□□□□□ -0.8
RAB40C-210ENST00000566290 A0A087WVE0 104 aa10.05□□□□□ -0.8
RAB40C-210ENST00000566290 IGKV4-1P06312 121 aa10.02□□□□□ -0.81
RAB40C-210ENST00000566290 FAM229BQ4G0N7 80 aa10.02□□□□□ -0.81
RAB40C-210ENST00000566290 SMIM20Q8N5G0 67 aa10.02□□□□□ -0.81
RAB40C-210ENST00000566290 A0A087WSZ3 146 aa10.01□□□□□ -0.81
RAB40C-210ENST00000566290 PLA2G1BP04054 148 aaKnown RBP10.01□□□□□ -0.81
RAB40C-210ENST00000566290 LRP2P98164 4655 aa10.01□□□□□ -0.81
RAB40C-210ENST00000566290 CD164Q04900 197 aa10□□□□□ -0.81
RAB40C-210ENST00000566290 SS18L2Q9UHA2 77 aa9.99□□□□□ -0.81
RAB40C-210ENST00000566290 C9orf153Q5TBE3 101 aa9.98□□□□□ -0.81
RAB40C-210ENST00000566290 SSBP3-AS1Q7Z2R9 100 aa9.98□□□□□ -0.81
RAB40C-210ENST00000566290 J3KT08 172 aa9.97□□□□□ -0.81
RAB40C-210ENST00000566290 UQCRQO14949 82 aa9.97□□□□□ -0.81
RAB40C-210ENST00000566290 DSCR10P59022 87 aa9.97□□□□□ -0.81
RAB40C-210ENST00000566290 SERP2Q8N6R1 65 aa9.97□□□□□ -0.81
RAB40C-210ENST00000566290 COX7CP15954 63 aa9.96□□□□□ -0.82
RAB40C-210ENST00000566290 LINC00472Q9H8W2 130 aa9.96□□□□□ -0.82
RAB40C-210ENST00000566290 IGLV9-49A0A0B4J1Y8 123 aa9.95□□□□□ -0.82
RAB40C-210ENST00000566290 A0A0G2JQZ4 141 aa9.94□□□□□ -0.82
RAB40C-210ENST00000566290 OXTP01178 125 aa9.94□□□□□ -0.82
RAB40C-210ENST00000566290 MOBPQ13875 183 aa9.94□□□□□ -0.82
RAB40C-210ENST00000566290 PKHD1L1Q86WI1 4243 aa9.93□□□□□ -0.82
RAB40C-210ENST00000566290 TRAV7A0A075B6U4 112 aa9.91□□□□□ -0.82
RAB40C-210ENST00000566290 ASB16-AS1Q495Z4 193 aa9.89□□□□□ -0.83
RAB40C-210ENST00000566290 SPINK6Q6UWN8 80 aa9.89□□□□□ -0.83
RAB40C-210ENST00000566290 A8MWP4 228 aa9.88□□□□□ -0.83
RAB40C-210ENST00000566290 KRTAP1-4P0C5Y4 121 aa9.88□□□□□ -0.83
RAB40C-210ENST00000566290 Q5XG85 94 aa9.88□□□□□ -0.83
RAB40C-210ENST00000566290 CCDC179H3BU77 68 aa9.87□□□□□ -0.83
RAB40C-210ENST00000566290 K7EQZ3 153 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms