RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 DNAH10OSP0CZ25 163 aa6.83□□□□□ -1.32
USB1-212ENST00000566082 COL6A5A8TX70 2615 aa6.82□□□□□ -1.32
USB1-212ENST00000566082 ITPR2Q14571 2701 aa6.82□□□□□ -1.32
USB1-212ENST00000566082 TRAV22A0A0B4J277 110 aa6.82□□□□□ -1.32
USB1-212ENST00000566082 SPAG11AQ6PDA7 123 aa6.81□□□□□ -1.32
USB1-212ENST00000566082 NBEAL1Q6ZS30 2694 aa6.8□□□□□ -1.32
USB1-212ENST00000566082 DSCR10P59022 87 aa6.79□□□□□ -1.32
USB1-212ENST00000566082 HIVEP1P15822 2718 aa6.78□□□□□ -1.32
USB1-212ENST00000566082 KRTAP10-11P60412 298 aa6.77□□□□□ -1.33
USB1-212ENST00000566082 STAB1Q9NY15 2570 aa6.77□□□□□ -1.33
USB1-212ENST00000566082 C16orf90A8MZG2 172 aa6.77□□□□□ -1.33
USB1-212ENST00000566082 ZNF706Q9Y5V0 76 aaPredicted RBP6.77□□□□□ -1.33
USB1-212ENST00000566082 CIRBP-AS1Q8TBR5 109 aa6.76□□□□□ -1.33
USB1-212ENST00000566082 RETNLBQ9BQ08 111 aa6.76□□□□□ -1.33
USB1-212ENST00000566082 A8MWP4 228 aa6.76□□□□□ -1.33
USB1-212ENST00000566082 H3BPC8 53 aa6.76□□□□□ -1.33
USB1-212ENST00000566082 TLX1NBP0CAT3 122 aa6.75□□□□□ -1.33
USB1-212ENST00000566082 PRR15Q8IV56 129 aa6.75□□□□□ -1.33
USB1-212ENST00000566082 COA5Q86WW8 74 aa6.74□□□□□ -1.33
USB1-212ENST00000566082 MOBPQ13875 183 aa6.74□□□□□ -1.33
USB1-212ENST00000566082 PLA2G2DQ9UNK4 145 aa6.73□□□□□ -1.33
USB1-212ENST00000566082 SPRR4Q96PI1 79 aa6.72□□□□□ -1.33
USB1-212ENST00000566082 KRTAP24-1Q3LI83 254 aa6.72□□□□□ -1.33
USB1-212ENST00000566082 C4orf48Q5BLP8 95 aa6.72□□□□□ -1.33
USB1-212ENST00000566082 TP53AIP1Q9HCN2 124 aa6.72□□□□□ -1.33
USB1-212ENST00000566082 NIPBLQ6KC79 2804 aaeCLIP6.72□□□□□ -1.33
USB1-212ENST00000566082 Q1T7F1 81 aa6.69□□□□□ -1.34
USB1-212ENST00000566082 NSD1Q96L73 2696 aaPredicted RBP6.68□□□□□ -1.34
USB1-212ENST00000566082 KRTAP26-1Q6PEX3 210 aa6.68□□□□□ -1.34
USB1-212ENST00000566082 IGLV5-37A0A075B6J1 123 aa6.66□□□□□ -1.34
USB1-212ENST00000566082 CYP4F30PQ9H0H9 118 aa6.65□□□□□ -1.34
USB1-212ENST00000566082 SPRR1AP35321 89 aa6.65□□□□□ -1.34
USB1-212ENST00000566082 LOC101927531A0A1B0GV80 90 aa6.65□□□□□ -1.35
USB1-212ENST00000566082 SPINK1P00995 79 aa6.63□□□□□ -1.35
USB1-212ENST00000566082 MDFIQ99750 246 aa6.63□□□□□ -1.35
USB1-212ENST00000566082 C8orf17Q9NRJ1 99 aa6.63□□□□□ -1.35
USB1-212ENST00000566082 SPANXA2-OT1Q8N9U9 137 aa6.63□□□□□ -1.35
USB1-212ENST00000566082 MRPL34Q9BQ48 92 aaKnown RBP6.62□□□□□ -1.35
USB1-212ENST00000566082 ANAPC11Q9NYG5 84 aa6.62□□□□□ -1.35
USB1-212ENST00000566082 IGLV5-52A0A0A0MRZ9 124 aa6.62□□□□□ -1.35
USB1-212ENST00000566082 IGKV2D-30A0A075B6S6 120 aa6.61□□□□□ -1.35
USB1-212ENST00000566082 A0A1B0GU69 56 aa6.61□□□□□ -1.35
USB1-212ENST00000566082 NUPR2A6NF83 97 aa6.61□□□□□ -1.35
USB1-212ENST00000566082 IGKV2-30P06310 120 aa6.61□□□□□ -1.35
USB1-212ENST00000566082 TNP2Q05952 138 aa6.61□□□□□ -1.35
USB1-212ENST00000566082 ACYP2P14621 99 aa6.6□□□□□ -1.35
USB1-212ENST00000566082 CNBPP62633 177 aaKnown RBP6.6□□□□□ -1.35
USB1-212ENST00000566082 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
USB1-212ENST00000566082 LY6G6CO95867 125 aa6.6□□□□□ -1.35
USB1-212ENST00000566082 ATP11AUNQ6ZP68 121 aa6.6□□□□□ -1.35
USB1-212ENST00000566082 Q8N9P0 234 aaPredicted RBP6.59□□□□□ -1.35
USB1-212ENST00000566082 K7EIL1 84 aa6.59□□□□□ -1.35
USB1-212ENST00000566082 C9orf163Q8N9P6 203 aa6.59□□□□□ -1.35
USB1-212ENST00000566082 OTOGQ6ZRI0 2925 aa6.59□□□□□ -1.36
USB1-212ENST00000566082 A0A1B0GVX0 72 aa6.58□□□□□ -1.36
USB1-212ENST00000566082 CD164Q04900 197 aa6.58□□□□□ -1.36
USB1-212ENST00000566082 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
USB1-212ENST00000566082 KRTAP4-16G5E9R7 235 aaPredicted RBP6.57□□□□□ -1.36
USB1-212ENST00000566082 Q5VV11 94 aa6.56□□□□□ -1.36
USB1-212ENST00000566082 PRR26Q8N8Z3 221 aa6.56□□□□□ -1.36
USB1-212ENST00000566082 IGLV8-61A0A075B6I0 122 aa6.55□□□□□ -1.36
USB1-212ENST00000566082 RTL8CO15255 209 aa6.54□□□□□ -1.36
USB1-212ENST00000566082 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
USB1-212ENST00000566082 AKAP9Q99996 3911 aa6.53□□□□□ -1.36
USB1-212ENST00000566082 MMP24-AS1A0A0U1RRL7 71 aa6.53□□□□□ -1.36
USB1-212ENST00000566082 IGLV7-46A0A075B6I9 117 aa6.53□□□□□ -1.36
USB1-212ENST00000566082 SPACA4Q8TDM5 124 aa6.53□□□□□ -1.36
USB1-212ENST00000566082 STAB2Q8WWQ8 2551 aa6.52□□□□□ -1.37
USB1-212ENST00000566082 LINC00313P59037 77 aa6.52□□□□□ -1.37
USB1-212ENST00000566082 LINC00472Q9H8W2 130 aa6.52□□□□□ -1.37
USB1-212ENST00000566082 C7orf65Q6ZTY9 151 aa6.51□□□□□ -1.37
USB1-212ENST00000566082 CDC42SE1Q9NRR8 79 aa6.51□□□□□ -1.37
USB1-212ENST00000566082 C1orf134Q5TEV5 83 aa6.51□□□□□ -1.37
USB1-212ENST00000566082 KMT2BQ9UMN6 2715 aaPredicted RBP6.51□□□□□ -1.37
USB1-212ENST00000566082 VWFP04275 2813 aa6.5□□□□□ -1.37
USB1-212ENST00000566082 KRTAP1-5Q9BYS1 174 aa6.5□□□□□ -1.37
USB1-212ENST00000566082 PSORS1C2Q9UIG4 136 aa6.5□□□□□ -1.37
USB1-212ENST00000566082 ZNF861PO60384 105 aa6.49□□□□□ -1.37
USB1-212ENST00000566082 PDZD2O15018 2839 aa6.49□□□□□ -1.37
USB1-212ENST00000566082 Q75L30 129 aa6.48□□□□□ -1.37
USB1-212ENST00000566082 KRTAP7-1Q8IUC3 87 aa6.48□□□□□ -1.37
USB1-212ENST00000566082 FAM229AH3BQW9 127 aa6.47□□□□□ -1.37
USB1-212ENST00000566082 KRTAP29-1A8MX34 341 aaPredicted RBP6.47□□□□□ -1.37
USB1-212ENST00000566082 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.46□□□□□ -1.37
USB1-212ENST00000566082 TENM3Q9P273 2699 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 A8MU10 97 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 C8orf87E5RJ46 101 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 K7ERS5 55 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 RBM12B-AS1Q9P1G2 102 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 TENM1Q9UKZ4 2725 aa6.46□□□□□ -1.38
USB1-212ENST00000566082 LCE6AA0A183 80 aa6.45□□□□□ -1.38
USB1-212ENST00000566082 APLNQ9ULZ1 77 aa6.45□□□□□ -1.38
USB1-212ENST00000566082 A0A087WTM6 91 aa6.44□□□□□ -1.38
USB1-212ENST00000566082 SPRR1BP22528 89 aa6.44□□□□□ -1.38
USB1-212ENST00000566082 HRES1P13985 223 aa6.44□□□□□ -1.38
USB1-212ENST00000566082 UQCR11O14957 56 aa6.43□□□□□ -1.38
USB1-212ENST00000566082 SPINK7P58062 85 aa6.43□□□□□ -1.38
USB1-212ENST00000566082 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
USB1-212ENST00000566082 MIR22HGQ0VDD5 57 aa6.41□□□□□ -1.38
USB1-212ENST00000566082 LCA10Q71F78 164 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms