RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 K7EQZ3 153 aa12.48□□□□□ -0.41
MSLN-205ENST00000563941 EPM2AB3EWF7 344 aa12.47□□□□□ -0.41
MSLN-205ENST00000563941 UBE2AP49459 152 aa12.47□□□□□ -0.41
MSLN-205ENST00000563941 SERP1Q9Y6X1 66 aa12.46□□□□□ -0.41
MSLN-205ENST00000563941 A0A0U1RQV1 116 aa12.46□□□□□ -0.42
MSLN-205ENST00000563941 DNAH7Q8WXX0 4024 aa12.45□□□□□ -0.42
MSLN-205ENST00000563941 H0Y9J4 135 aa12.45□□□□□ -0.42
MSLN-205ENST00000563941 FAM30AQ9NZY2 134 aa12.45□□□□□ -0.42
MSLN-205ENST00000563941 CSMD3Q7Z407 3707 aa12.44□□□□□ -0.42
MSLN-205ENST00000563941 NUPR2A6NF83 97 aa12.44□□□□□ -0.42
MSLN-205ENST00000563941 PKIGQ9Y2B9 76 aa12.44□□□□□ -0.42
MSLN-205ENST00000563941 Q6ZRN7 208 aaPredicted RBP12.43□□□□□ -0.42
MSLN-205ENST00000563941 A0A087WSZ3 146 aa12.42□□□□□ -0.42
MSLN-205ENST00000563941 PLECQ15149 4684 aaKnown RBP12.42□□□□□ -0.42
MSLN-205ENST00000563941 TENM2Q9NT68 2774 aa12.41□□□□□ -0.42
MSLN-205ENST00000563941 SPRR1BP22528 89 aa12.41□□□□□ -0.42
MSLN-205ENST00000563941 LINC00474Q9P2X8 69 aa12.4□□□□□ -0.43
MSLN-205ENST00000563941 PANO1I0J062 215 aa12.39□□□□□ -0.43
MSLN-205ENST00000563941 ATP5EP56381 51 aaPredicted RBP12.39□□□□□ -0.43
MSLN-205ENST00000563941 DEFB116Q30KQ4 102 aa12.39□□□□□ -0.43
MSLN-205ENST00000563941 Q5XG85 94 aa12.38□□□□□ -0.43
MSLN-205ENST00000563941 HCG22E2RYF7 251 aa12.37□□□□□ -0.43
MSLN-205ENST00000563941 LCE6AA0A183 80 aa12.36□□□□□ -0.43
MSLN-205ENST00000563941 PRKDCP78527 4128 aaKnown RBP12.33□□□□□ -0.44
MSLN-205ENST00000563941 C4orf26Q17RF5 130 aa12.32□□□□□ -0.44
MSLN-205ENST00000563941 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
MSLN-205ENST00000563941 KRTAP13-1Q8IUC0 172 aa12.31□□□□□ -0.44
MSLN-205ENST00000563941 SRRM2Q9UQ35 2752 aaKnown RBP12.3□□□□□ -0.44
MSLN-205ENST00000563941 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.3□□□□□ -0.44
MSLN-205ENST00000563941 SPACA4Q8TDM5 124 aa12.29□□□□□ -0.44
MSLN-205ENST00000563941 RPL37AP61513 92 aaKnown RBP12.29□□□□□ -0.44
MSLN-205ENST00000563941 DNHD1Q96M86 4753 aa12.28□□□□□ -0.44
MSLN-205ENST00000563941 WFDC13Q8IUB5 93 aa12.27□□□□□ -0.45
MSLN-205ENST00000563941 STARD9Q9P2P6 4700 aa12.26□□□□□ -0.45
MSLN-205ENST00000563941 A0A087WTM6 91 aa12.25□□□□□ -0.45
MSLN-205ENST00000563941 C5orf47Q569G3 176 aa12.25□□□□□ -0.45
MSLN-205ENST00000563941 VPS13DQ5THJ4 4388 aa12.24□□□□□ -0.45
MSLN-205ENST00000563941 ZCCHC13Q8WW36 166 aaKnown RBP12.24□□□□□ -0.45
MSLN-205ENST00000563941 SMIM26A0A096LP01 95 aa12.23□□□□□ -0.45
MSLN-205ENST00000563941 HRCT1Q6UXD1 115 aa12.23□□□□□ -0.45
MSLN-205ENST00000563941 LINC00472Q9H8W2 130 aa12.23□□□□□ -0.45
MSLN-205ENST00000563941 KRTAP29-1A8MX34 341 aaPredicted RBP12.2□□□□□ -0.46
MSLN-205ENST00000563941 FP248Q71RG6 208 aaPredicted RBP12.2□□□□□ -0.46
MSLN-205ENST00000563941 PRR15Q8IV56 129 aa12.2□□□□□ -0.46
MSLN-205ENST00000563941 A8MWP4 228 aa12.19□□□□□ -0.46
MSLN-205ENST00000563941 RTL8CO15255 209 aa12.17□□□□□ -0.46
MSLN-205ENST00000563941 CASC2Q6XLA1 102 aa12.17□□□□□ -0.46
MSLN-205ENST00000563941 IGLV9-49A0A0B4J1Y8 123 aa12.16□□□□□ -0.46
MSLN-205ENST00000563941 FAM229BQ4G0N7 80 aa12.14□□□□□ -0.47
MSLN-205ENST00000563941 LINC00483Q53H64 154 aa12.13□□□□□ -0.47
MSLN-205ENST00000563941 Q6ZR54 194 aa12.13□□□□□ -0.47
MSLN-205ENST00000563941 MP68P56378 58 aa12.11□□□□□ -0.47
MSLN-205ENST00000563941 PSORS1C2Q9UIG4 136 aa12.11□□□□□ -0.47
MSLN-205ENST00000563941 HECTD4Q9Y4D8 3996 aa12.11□□□□□ -0.47
MSLN-205ENST00000563941 IGLV5-52A0A0A0MRZ9 124 aa12.1□□□□□ -0.47
MSLN-205ENST00000563941 ZNF706Q9Y5V0 76 aaPredicted RBP12.09□□□□□ -0.47
MSLN-205ENST00000563941 PLAC8Q9NZF1 115 aa12.08□□□□□ -0.47
MSLN-205ENST00000563941 Q96NJ1 140 aa12.06□□□□□ -0.48
MSLN-205ENST00000563941 MMP24-AS1A0A0U1RRL7 71 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 NDUFB1O75438 58 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 LINC00208Q96KT6 92 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 WWC2-AS2Q96NR7 200 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 DNAH17Q9UFH2 4485 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 hDV103S1A0JD37 113 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 H0Y9P7 68 aa12.05□□□□□ -0.48
MSLN-205ENST00000563941 TRAV22A0A0B4J277 110 aa12.04□□□□□ -0.48
MSLN-205ENST00000563941 KMT2AQ03164 3969 aa12.04□□□□□ -0.48
MSLN-205ENST00000563941 FBN3Q75N90 2809 aa12.03□□□□□ -0.48
MSLN-205ENST00000563941 DNAH2Q9P225 4427 aa12.03□□□□□ -0.48
MSLN-205ENST00000563941 ZNF861PO60384 105 aa12.02□□□□□ -0.48
MSLN-205ENST00000563941 MOBPQ13875 183 aa12.02□□□□□ -0.48
MSLN-205ENST00000563941 C1orf64Q8NEQ6 169 aa12.02□□□□□ -0.48
MSLN-205ENST00000563941 C1orf134Q5TEV5 83 aa12.01□□□□□ -0.49
MSLN-205ENST00000563941 MPLKIPQ8TAP9 179 aa12.01□□□□□ -0.49
MSLN-205ENST00000563941 CYP4F30PQ9H0H9 118 aa12.01□□□□□ -0.49
MSLN-205ENST00000563941 ANAPC11Q9NYG5 84 aa12.01□□□□□ -0.49
MSLN-205ENST00000563941 H3BPC8 53 aa12□□□□□ -0.49
MSLN-205ENST00000563941 PRR4Q16378 134 aa12□□□□□ -0.49
MSLN-205ENST00000563941 DNAH8Q96JB1 4490 aa11.97□□□□□ -0.49
MSLN-205ENST00000563941 TGP01266 2768 aa11.96□□□□□ -0.5
MSLN-205ENST00000563941 LINC00336Q6ZUF6 198 aa11.95□□□□□ -0.5
MSLN-205ENST00000563941 FRAS1Q86XX4 4008 aa11.95□□□□□ -0.5
MSLN-205ENST00000563941 ASB16-AS1Q495Z4 193 aa11.93□□□□□ -0.5
MSLN-205ENST00000563941 KRTAP21-3Q3LHN1 58 aa11.93□□□□□ -0.5
MSLN-205ENST00000563941 C8orf17Q9NRJ1 99 aa11.92□□□□□ -0.5
MSLN-205ENST00000563941 LY6G6CO95867 125 aa11.92□□□□□ -0.5
MSLN-205ENST00000563941 IGLV7-43P04211 117 aa11.9□□□□□ -0.5
MSLN-205ENST00000563941 A0A1B0GVX0 72 aa11.9□□□□□ -0.5
MSLN-205ENST00000563941 IGHV6-1A0A0B4J1U7 121 aa11.89□□□□□ -0.51
MSLN-205ENST00000563941 SPANXA2-OT1Q8N9U9 137 aa11.89□□□□□ -0.51
MSLN-205ENST00000563941 CDK2AP2O75956 126 aa11.87□□□□□ -0.51
MSLN-205ENST00000563941 TP53AIP1Q9HCN2 124 aa11.87□□□□□ -0.51
MSLN-205ENST00000563941 Q1T7F1 81 aa11.82□□□□□ -0.52
MSLN-205ENST00000563941 PRO0628Q9UI54 55 aa11.81□□□□□ -0.52
MSLN-205ENST00000563941 NDUFS5O43920 106 aa11.8□□□□□ -0.52
MSLN-205ENST00000563941 KRTAP10-2P60368 255 aa11.8□□□□□ -0.52
MSLN-205ENST00000563941 MRPL34Q9BQ48 92 aaKnown RBP11.8□□□□□ -0.52
MSLN-205ENST00000563941 CIRBP-AS1Q8TBR5 109 aa11.79□□□□□ -0.52
MSLN-205ENST00000563941 A0A087X002 238 aa11.78□□□□□ -0.52
MSLN-205ENST00000563941 NOTCH2NLQ7Z3S9 236 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms