RNA–Protein interactions for RNA: ENST00000563798.1

VPS9D1-203, Transcript of VPS9 domain containing 1, humanhuman

TSL 3

Gene VPS9D1, Length 459 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-203ENST00000563798 CFC1BP0CG36 223 aa9.18□□□□□ -0.94
VPS9D1-203ENST00000563798 Q6JHZ5 121 aa9.18□□□□□ -0.94
VPS9D1-203ENST00000563798 hADV29S1A0JD25 119 aa9.17□□□□□ -0.94
VPS9D1-203ENST00000563798 Q6ZQY7 126 aa9.17□□□□□ -0.94
VPS9D1-203ENST00000563798 HSBP1L1C9JCN9 74 aa9.16□□□□□ -0.94
VPS9D1-203ENST00000563798 S100A2P29034 98 aa9.14□□□□□ -0.95
VPS9D1-203ENST00000563798 CLEC2BQ92478 149 aa9.14□□□□□ -0.95
VPS9D1-203ENST00000563798 TRBV7-7A0A0K0K1E9 115 aa9.13□□□□□ -0.95
VPS9D1-203ENST00000563798 OCIAD2Q56VL3 154 aa9.13□□□□□ -0.95
VPS9D1-203ENST00000563798 IGFL1Q6UW32 110 aa9.13□□□□□ -0.95
VPS9D1-203ENST00000563798 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.13□□□□□ -0.95
VPS9D1-203ENST00000563798 PPDPFLQ8WWR9 84 aa9.13□□□□□ -0.95
VPS9D1-203ENST00000563798 LORP23490 312 aaPredicted RBP9.11□□□□□ -0.95
VPS9D1-203ENST00000563798 BVES-AS1Q5T3Y7 98 aa9.1□□□□□ -0.95
VPS9D1-203ENST00000563798 KRTAP10-6P60371 365 aaPredicted RBP9.09□□□□□ -0.95
VPS9D1-203ENST00000563798 DLEU1O43261 78 aa9.05□□□□□ -0.96
VPS9D1-203ENST00000563798 SCGB1D1O95968 90 aa9.05□□□□□ -0.96
VPS9D1-203ENST00000563798 COX8AP10176 69 aa9.05□□□□□ -0.96
VPS9D1-203ENST00000563798 HIST1H4GQ99525 98 aa9.05□□□□□ -0.96
VPS9D1-203ENST00000563798 Q75L30 129 aa9.04□□□□□ -0.96
VPS9D1-203ENST00000563798 SNHG12Q9BXW3 62 aa9.04□□□□□ -0.96
VPS9D1-203ENST00000563798 S100A6P06703 90 aa9.03□□□□□ -0.96
VPS9D1-203ENST00000563798 C12orf57Q99622 126 aa9.03□□□□□ -0.96
VPS9D1-203ENST00000563798 COX6B2Q6YFQ2 88 aa9.02□□□□□ -0.97
VPS9D1-203ENST00000563798 Q6Q795 121 aa9.01□□□□□ -0.97
VPS9D1-203ENST00000563798 FLGP20930 4061 aaPredicted RBP9□□□□□ -0.97
VPS9D1-203ENST00000563798 S100A1P23297 94 aa9□□□□□ -0.97
VPS9D1-203ENST00000563798 OBSCN-AS1Q96MR7 158 aa9□□□□□ -0.97
VPS9D1-203ENST00000563798 H3BUT2 72 aa8.99□□□□□ -0.97
VPS9D1-203ENST00000563798 M0R2T5 61 aa8.99□□□□□ -0.97
VPS9D1-203ENST00000563798 LST1O00453 97 aa8.99□□□□□ -0.97
VPS9D1-203ENST00000563798 CFC1P0CG37 223 aa8.99□□□□□ -0.97
VPS9D1-203ENST00000563798 ATP11AUNQ6ZP68 121 aa8.99□□□□□ -0.97
VPS9D1-203ENST00000563798 H0YGX0 51 aa8.98□□□□□ -0.97
VPS9D1-203ENST00000563798 HIGD1BQ9P298 99 aa8.97□□□□□ -0.97
VPS9D1-203ENST00000563798 SS18L2Q9UHA2 77 aa8.97□□□□□ -0.97
VPS9D1-203ENST00000563798 A0A0B4J2C4 111 aa8.96□□□□□ -0.98
VPS9D1-203ENST00000563798 SNCGO76070 127 aa8.96□□□□□ -0.98
VPS9D1-203ENST00000563798 TEN1Q86WV5 123 aa8.95□□□□□ -0.98
VPS9D1-203ENST00000563798 RAB37Q96AX2 223 aa8.94□□□□□ -0.98
VPS9D1-203ENST00000563798 NDUFV3P56181 108 aaKnown RBP8.93□□□□□ -0.98
VPS9D1-203ENST00000563798 FAM218AQ96MZ4 157 aa8.93□□□□□ -0.98
VPS9D1-203ENST00000563798 A0A1B0GX51 115 aa8.92□□□□□ -0.98
VPS9D1-203ENST00000563798 C14orf144Q96I85 54 aa8.92□□□□□ -0.98
VPS9D1-203ENST00000563798 Q96NJ1 140 aa8.92□□□□□ -0.98
VPS9D1-203ENST00000563798 C20orf166-AS1Q96NR2 134 aa8.92□□□□□ -0.98
VPS9D1-203ENST00000563798 GHRHP01286 108 aa8.9□□□□□ -0.98
VPS9D1-203ENST00000563798 C2orf91Q6ZV80 131 aa8.9□□□□□ -0.98
VPS9D1-203ENST00000563798 A8MUU9 505 aa8.89□□□□□ -0.99
VPS9D1-203ENST00000563798 SPATA45Q537H7 98 aa8.88□□□□□ -0.99
VPS9D1-203ENST00000563798 A0A087WSZ3 146 aa8.87□□□□□ -0.99
VPS9D1-203ENST00000563798 PAM16Q9Y3D7 125 aa8.87□□□□□ -0.99
VPS9D1-203ENST00000563798 H3BMG7 143 aa8.86□□□□□ -0.99
VPS9D1-203ENST00000563798 CEND1Q8N111 149 aa8.86□□□□□ -0.99
VPS9D1-203ENST00000563798 PRO1854Q9UHT4 67 aa8.86□□□□□ -0.99
VPS9D1-203ENST00000563798 VAMP8Q9BV40 100 aa8.84□□□□□ -0.99
VPS9D1-203ENST00000563798 TMEM238LA0A1B0GVL6 79 aa8.83□□□□□ -1
VPS9D1-203ENST00000563798 A6NJY4 79 aa8.83□□□□□ -1
VPS9D1-203ENST00000563798 A0A1W2PNM2 257 aa8.82□□□□□ -1
VPS9D1-203ENST00000563798 FABP2P12104 132 aa8.81□□□□□ -1
VPS9D1-203ENST00000563798 KRTAP9-7A8MTY7 169 aa8.79□□□□□ -1
VPS9D1-203ENST00000563798 TRIAP1O43715 76 aa8.79□□□□□ -1
VPS9D1-203ENST00000563798 FXYD2P54710 66 aa8.79□□□□□ -1
VPS9D1-203ENST00000563798 TRBV7-4A0A0J9YYF1 115 aa8.77□□□□□ -1.01
VPS9D1-203ENST00000563798 H3BQ85 93 aa8.77□□□□□ -1.01
VPS9D1-203ENST00000563798 DSCR10P59022 87 aa8.77□□□□□ -1.01
VPS9D1-203ENST00000563798 TRBV20-1A0A075B6N2 111 aa8.76□□□□□ -1.01
VPS9D1-203ENST00000563798 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
VPS9D1-203ENST00000563798 KRTAP9-8Q9BYQ0 159 aa8.75□□□□□ -1.01
VPS9D1-203ENST00000563798 KRTAP16-1A8MUX0 517 aa8.74□□□□□ -1.01
VPS9D1-203ENST00000563798 ORMDL1Q9P0S3 153 aa8.74□□□□□ -1.01
VPS9D1-203ENST00000563798 LINC00313P59037 77 aa8.73□□□□□ -1.01
VPS9D1-203ENST00000563798 SIGMAR1Q99720 223 aa8.73□□□□□ -1.01
VPS9D1-203ENST00000563798 TMEM256-PLSCR3K7ERE1 68 aa8.71□□□□□ -1.02
VPS9D1-203ENST00000563798 DNAL4O96015 105 aa8.71□□□□□ -1.02
VPS9D1-203ENST00000563798 IGKV4-1P06312 121 aa8.71□□□□□ -1.02
VPS9D1-203ENST00000563798 LINC00472Q9H8W2 130 aa8.71□□□□□ -1.02
VPS9D1-203ENST00000563798 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.7□□□□□ -1.02
VPS9D1-203ENST00000563798 HSD52Q0P140 79 aa8.7□□□□□ -1.02
VPS9D1-203ENST00000563798 COX6CP09669 75 aa8.68□□□□□ -1.02
VPS9D1-203ENST00000563798 PSMB2P49721 201 aa8.67□□□□□ -1.02
VPS9D1-203ENST00000563798 UBE2V1Q13404 147 aa8.67□□□□□ -1.02
VPS9D1-203ENST00000563798 NOTCH2NLQ7Z3S9 236 aa8.67□□□□□ -1.02
VPS9D1-203ENST00000563798 MPLKIPQ8TAP9 179 aa8.67□□□□□ -1.02
VPS9D1-203ENST00000563798 PYY3Q5JQD4 70 aa8.66□□□□□ -1.02
VPS9D1-203ENST00000563798 K7ERJ3 54 aa8.65□□□□□ -1.02
VPS9D1-203ENST00000563798 CCKP06307 115 aa8.65□□□□□ -1.02
VPS9D1-203ENST00000563798 TRACP01848 142 aa8.64□□□□□ -1.03
VPS9D1-203ENST00000563798 HRES1P13985 223 aa8.63□□□□□ -1.03
VPS9D1-203ENST00000563798 USH2AO75445 5202 aa8.62□□□□□ -1.03
VPS9D1-203ENST00000563798 A0A1B0GV72 72 aa8.62□□□□□ -1.03
VPS9D1-203ENST00000563798 DEFB116Q30KQ4 102 aa8.62□□□□□ -1.03
VPS9D1-203ENST00000563798 IGHV6-1A0A0B4J1U7 121 aa8.59□□□□□ -1.03
VPS9D1-203ENST00000563798 RBM12B-AS1Q9P1G2 102 aa8.59□□□□□ -1.03
VPS9D1-203ENST00000563798 SSPOA2VEC9 5147 aa8.58□□□□□ -1.04
VPS9D1-203ENST00000563798 FAM236DA0A1B0GTK5 79 aa8.58□□□□□ -1.04
VPS9D1-203ENST00000563798 C8orf87E5RJ46 101 aa8.58□□□□□ -1.04
VPS9D1-203ENST00000563798 MT2AP02795 61 aa8.58□□□□□ -1.04
VPS9D1-203ENST00000563798 FAM236CP0DP71 79 aa8.58□□□□□ -1.04
VPS9D1-203ENST00000563798 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms